Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 RPL30P11-203ENST00000598995 310 ntBASIC3.16□□□□□ -1.9
TRIM48Q8IWZ4 SCARNA17.4-201ENST00000614296 143 ntBASIC3.16□□□□□ -1.9
TRIM48Q8IWZ4 AC002064.3-201ENST00000623448 346 ntBASIC3.16□□□□□ -1.9
TRIM48Q8IWZ4 AC090517.3-201ENST00000625170 141 ntBASIC3.16□□□□□ -1.9
TRIM48Q8IWZ4 AC000403.1-201ENST00000613696 3585 ntBASIC3.16□□□□□ -1.9
TRIM48Q8IWZ4 AL359854.1-201ENST00000614203 1594 ntBASIC3.16□□□□□ -1.9
TRIM48Q8IWZ4 AC058791.1-201ENST00000608412 3198 ntBASIC3.16□□□□□ -1.9
TRIM48Q8IWZ4 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.9
TRIM48Q8IWZ4 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
TRIM48Q8IWZ4 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
TRIM48Q8IWZ4 RNU6-187P-201ENST00000384139 106 ntBASIC3.15□□□□□ -1.91
TRIM48Q8IWZ4 Y_RNA.464-201ENST00000384282 110 ntBASIC3.15□□□□□ -1.91
TRIM48Q8IWZ4 BTF3P11-201ENST00000426582 477 ntBASIC3.15□□□□□ -1.91
TRIM48Q8IWZ4 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.15□□□□□ -1.91
TRIM48Q8IWZ4 AC140059.1-201ENST00000489238 361 ntBASIC3.15□□□□□ -1.91
TRIM48Q8IWZ4 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC3.15□□□□□ -1.91
TRIM48Q8IWZ4 MIR449C-201ENST00000516047 92 ntBASIC3.15□□□□□ -1.91
TRIM48Q8IWZ4 AC026241.1-201ENST00000517873 2142 ntBASIC3.15□□□□□ -1.91
TRIM48Q8IWZ4 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.15□□□□□ -1.91
TRIM48Q8IWZ4 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.15□□□□□ -1.91
TRIM48Q8IWZ4 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.15□□□□□ -1.91
TRIM48Q8IWZ4 MIR4308-201ENST00000580634 81 ntBASIC3.15□□□□□ -1.91
TRIM48Q8IWZ4 MIR3200-201ENST00000580767 85 ntBASIC3.15□□□□□ -1.91
TRIM48Q8IWZ4 AL670379.2-201ENST00000604983 252 ntBASIC3.15□□□□□ -1.91
TRIM48Q8IWZ4 AC072026.1-201ENST00000605023 201 ntBASIC3.15□□□□□ -1.91
TRIM48Q8IWZ4 AL008718.3-201ENST00000610217 321 ntBASIC3.15□□□□□ -1.91
TRIM48Q8IWZ4 UCA1.1-201ENST00000620952 75 ntBASIC3.15□□□□□ -1.91
TRIM48Q8IWZ4 AL365265.1-201ENST00000621045 234 ntBASIC3.15□□□□□ -1.91
TRIM48Q8IWZ4 AC110079.1-202ENST00000635213 138 ntBASIC3.15□□□□□ -1.91
TRIM48Q8IWZ4 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
TRIM48Q8IWZ4 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
TRIM48Q8IWZ4 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
TRIM48Q8IWZ4 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.15□□□□□ -1.91
TRIM48Q8IWZ4 GABRG2-229ENST00000641017 3628 ntBASIC3.14□□□□□ -1.91
TRIM48Q8IWZ4 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
TRIM48Q8IWZ4 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
TRIM48Q8IWZ4 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.14□□□□□ -1.91
TRIM48Q8IWZ4 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.14□□□□□ -1.91
TRIM48Q8IWZ4 MIR148B-201ENST00000362252 99 ntBASIC3.14□□□□□ -1.91
TRIM48Q8IWZ4 Y_RNA.233-201ENST00000364407 101 ntBASIC3.14□□□□□ -1.91
TRIM48Q8IWZ4 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.14□□□□□ -1.91
TRIM48Q8IWZ4 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.14□□□□□ -1.91
TRIM48Q8IWZ4 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC3.14□□□□□ -1.91
TRIM48Q8IWZ4 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.14□□□□□ -1.91
TRIM48Q8IWZ4 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.14□□□□□ -1.91
TRIM48Q8IWZ4 AC146507.2-201ENST00000460608 476 ntBASIC3.14□□□□□ -1.91
TRIM48Q8IWZ4 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.14□□□□□ -1.91
TRIM48Q8IWZ4 HMGB3P3-201ENST00000510526 400 ntBASIC3.14□□□□□ -1.91
TRIM48Q8IWZ4 SNORA64.4-201ENST00000516632 81 ntBASIC3.14□□□□□ -1.91
TRIM48Q8IWZ4 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.14□□□□□ -1.91
TRIM48Q8IWZ4 MIR5004-201ENST00000579078 107 ntBASIC3.14□□□□□ -1.91
TRIM48Q8IWZ4 AC008739.2-201ENST00000597006 317 ntBASIC3.14□□□□□ -1.91
TRIM48Q8IWZ4 YPEL5P2-201ENST00000605553 359 ntBASIC3.14□□□□□ -1.91
TRIM48Q8IWZ4 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.14□□□□□ -1.91
TRIM48Q8IWZ4 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.14□□□□□ -1.91
TRIM48Q8IWZ4 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.14□□□□□ -1.91
TRIM48Q8IWZ4 MIR8057-201ENST00000620957 69 ntBASIC3.14□□□□□ -1.91
TRIM48Q8IWZ4 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.14□□□□□ -1.91
TRIM48Q8IWZ4 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
TRIM48Q8IWZ4 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
TRIM48Q8IWZ4 RNU1-35P-201ENST00000362782 153 ntBASIC3.13□□□□□ -1.91
TRIM48Q8IWZ4 SNORA67.2-201ENST00000384300 149 ntBASIC3.13□□□□□ -1.91
TRIM48Q8IWZ4 OOSP1P1-201ENST00000423265 274 ntBASIC3.13□□□□□ -1.91
TRIM48Q8IWZ4 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.13□□□□□ -1.91
TRIM48Q8IWZ4 HMGN1P18-201ENST00000457642 277 ntBASIC3.13□□□□□ -1.91
TRIM48Q8IWZ4 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
TRIM48Q8IWZ4 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.13□□□□□ -1.91
TRIM48Q8IWZ4 RAC1P5-201ENST00000512182 576 ntBASIC3.13□□□□□ -1.91
TRIM48Q8IWZ4 Y_RNA.662-201ENST00000516028 97 ntBASIC3.13□□□□□ -1.91
TRIM48Q8IWZ4 MIR2276-201ENST00000516886 89 ntBASIC3.13□□□□□ -1.91
TRIM48Q8IWZ4 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.13□□□□□ -1.91
TRIM48Q8IWZ4 AC103810.1-201ENST00000579873 453 ntBASIC3.13□□□□□ -1.91
TRIM48Q8IWZ4 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.13□□□□□ -1.91
TRIM48Q8IWZ4 AL162274.2-201ENST00000614406 332 ntBASIC3.13□□□□□ -1.91
TRIM48Q8IWZ4 AC021753.1-201ENST00000635724 168 ntBASIC3.13□□□□□ -1.91
TRIM48Q8IWZ4 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
TRIM48Q8IWZ4 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.13□□□□□ -1.91
TRIM48Q8IWZ4 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.12□□□□□ -1.91
TRIM48Q8IWZ4 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
TRIM48Q8IWZ4 RNU6-1272P-201ENST00000362776 107 ntBASIC3.12□□□□□ -1.91
TRIM48Q8IWZ4 RNA5SP374-201ENST00000362939 125 ntBASIC3.12□□□□□ -1.91
TRIM48Q8IWZ4 RNU6-1305P-201ENST00000364353 104 ntBASIC3.12□□□□□ -1.91
TRIM48Q8IWZ4 Y_RNA.262-201ENST00000364641 102 ntBASIC3.12□□□□□ -1.91
TRIM48Q8IWZ4 RNU6-746P-201ENST00000384112 109 ntBASIC3.12□□□□□ -1.91
TRIM48Q8IWZ4 MIR548B-201ENST00000385247 97 ntBASIC3.12□□□□□ -1.91
TRIM48Q8IWZ4 U8.19-201ENST00000459095 133 ntBASIC3.12□□□□□ -1.91
TRIM48Q8IWZ4 Y_RNA.637-201ENST00000459424 114 ntBASIC3.12□□□□□ -1.91
TRIM48Q8IWZ4 RNU6-1278P-201ENST00000516130 107 ntBASIC3.12□□□□□ -1.91
TRIM48Q8IWZ4 RNU6-1098P-201ENST00000516772 96 ntBASIC3.12□□□□□ -1.91
TRIM48Q8IWZ4 AC104027.1-201ENST00000521887 300 ntBASIC3.12□□□□□ -1.91
TRIM48Q8IWZ4 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
TRIM48Q8IWZ4 U6.98-201ENST00000637157 84 ntBASIC3.12□□□□□ -1.91
TRIM48Q8IWZ4 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.12□□□□□ -1.91
TRIM48Q8IWZ4 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.12□□□□□ -1.91
TRIM48Q8IWZ4 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
TRIM48Q8IWZ4 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.12□□□□□ -1.91
TRIM48Q8IWZ4 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
TRIM48Q8IWZ4 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
TRIM48Q8IWZ4 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
TRIM48Q8IWZ4 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms