Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 AC010900.2-201ENST00000604508 210 ntBASIC1.94□□□□□ -2.1
LINC00346Q8IVM7 AC116312.1-201ENST00000606841 314 ntBASIC1.94□□□□□ -2.1
LINC00346Q8IVM7 AC009831.4-201ENST00000620744 325 ntBASIC1.94□□□□□ -2.1
LINC00346Q8IVM7 AC005858.4-201ENST00000623191 700 ntBASIC1.94□□□□□ -2.1
LINC00346Q8IVM7 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
LINC00346Q8IVM7 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
LINC00346Q8IVM7 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
LINC00346Q8IVM7 U3.8-201ENST00000363675 217 ntBASIC1.93□□□□□ -2.1
LINC00346Q8IVM7 SNORD81.2-201ENST00000365153 76 ntBASIC1.93□□□□□ -2.1
LINC00346Q8IVM7 RNU6-1283P-201ENST00000365314 105 ntBASIC1.93□□□□□ -2.1
LINC00346Q8IVM7 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
LINC00346Q8IVM7 CST2P1-201ENST00000425770 87 ntBASIC1.93□□□□□ -2.1
LINC00346Q8IVM7 USP9YP16-201ENST00000430287 407 ntBASIC1.93□□□□□ -2.1
LINC00346Q8IVM7 AC069257.2-201ENST00000441819 155 ntBASIC1.93□□□□□ -2.1
LINC00346Q8IVM7 UBE2V1P7-201ENST00000446395 340 ntBASIC1.93□□□□□ -2.1
LINC00346Q8IVM7 USP9YP23-201ENST00000455085 407 ntBASIC1.93□□□□□ -2.1
LINC00346Q8IVM7 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.93□□□□□ -2.1
LINC00346Q8IVM7 RNVU1-2-201ENST00000516326 135 ntBASIC1.93□□□□□ -2.1
LINC00346Q8IVM7 RNU4ATAC17P-201ENST00000517272 120 ntBASIC1.93□□□□□ -2.1
LINC00346Q8IVM7 SUB1P4-201ENST00000566062 339 ntBASIC1.93□□□□□ -2.1
LINC00346Q8IVM7 AC005014.2-201ENST00000607795 599 ntBASIC1.93□□□□□ -2.1
LINC00346Q8IVM7 MIR6132-201ENST00000622083 109 ntBASIC1.93□□□□□ -2.1
LINC00346Q8IVM7 AC022513.1-201ENST00000624512 117 ntBASIC1.93□□□□□ -2.1
LINC00346Q8IVM7 snoZ196.1-201ENST00000625269 89 ntBASIC1.93□□□□□ -2.1
LINC00346Q8IVM7 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
LINC00346Q8IVM7 RNY1P16-201ENST00000363063 111 ntBASIC1.92□□□□□ -2.1
LINC00346Q8IVM7 RNU6-418P-201ENST00000384035 107 ntBASIC1.92□□□□□ -2.1
LINC00346Q8IVM7 MIR10B-201ENST00000385011 110 ntBASIC1.92□□□□□ -2.1
LINC00346Q8IVM7 MIR549A-201ENST00000385268 96 ntBASIC1.92□□□□□ -2.1
LINC00346Q8IVM7 MIR190B-201ENST00000401119 79 ntBASIC1.92□□□□□ -2.1
LINC00346Q8IVM7 HMGN2P38-201ENST00000423806 265 ntBASIC1.92□□□□□ -2.1
LINC00346Q8IVM7 MTND3P23-201ENST00000431980 347 ntBASIC1.92□□□□□ -2.1
LINC00346Q8IVM7 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.92□□□□□ -2.1
LINC00346Q8IVM7 RNA5SP57-201ENST00000459463 123 ntBASIC1.92□□□□□ -2.1
LINC00346Q8IVM7 RNU7-57P-201ENST00000459540 60 ntBASIC1.92□□□□□ -2.1
LINC00346Q8IVM7 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.92□□□□□ -2.1
LINC00346Q8IVM7 AP000870.1-201ENST00000472927 406 ntBASIC1.92□□□□□ -2.1
LINC00346Q8IVM7 AC090255.1-201ENST00000495779 349 ntBASIC1.92□□□□□ -2.1
LINC00346Q8IVM7 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.92□□□□□ -2.1
LINC00346Q8IVM7 RNA5SP200-201ENST00000516360 103 ntBASIC1.92□□□□□ -2.1
LINC00346Q8IVM7 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.92□□□□□ -2.1
LINC00346Q8IVM7 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.92□□□□□ -2.1
LINC00346Q8IVM7 AC090617.3-201ENST00000573670 475 ntBASIC1.92□□□□□ -2.1
LINC00346Q8IVM7 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.92□□□□□ -2.1
LINC00346Q8IVM7 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.92□□□□□ -2.1
LINC00346Q8IVM7 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.92□□□□□ -2.1
LINC00346Q8IVM7 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
LINC00346Q8IVM7 SNORA72.2-201ENST00000365028 127 ntBASIC1.91□□□□□ -2.1
LINC00346Q8IVM7 Y_RNA.364-201ENST00000365532 101 ntBASIC1.91□□□□□ -2.1
LINC00346Q8IVM7 SNORA51.11-201ENST00000384442 131 ntBASIC1.91□□□□□ -2.1
LINC00346Q8IVM7 SNORA75.4-201ENST00000391278 119 ntBASIC1.91□□□□□ -2.1
LINC00346Q8IVM7 RNA5SP100-201ENST00000410903 110 ntBASIC1.91□□□□□ -2.1
LINC00346Q8IVM7 RNA5SP59-201ENST00000410922 110 ntBASIC1.91□□□□□ -2.1
LINC00346Q8IVM7 AC007098.1-201ENST00000420122 367 ntBASIC1.91□□□□□ -2.1
LINC00346Q8IVM7 MTCO3P29-201ENST00000432119 779 ntBASIC1.91□□□□□ -2.1
LINC00346Q8IVM7 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC1.91□□□□□ -2.1
LINC00346Q8IVM7 RNU6-221P-201ENST00000459541 99 ntBASIC1.91□□□□□ -2.1
LINC00346Q8IVM7 HMGN1P12-201ENST00000499125 195 ntBASIC1.91□□□□□ -2.1
LINC00346Q8IVM7 AC011406.1-201ENST00000512440 370 ntBASIC1.91□□□□□ -2.1
LINC00346Q8IVM7 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.91□□□□□ -2.1
LINC00346Q8IVM7 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.91□□□□□ -2.1
LINC00346Q8IVM7 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.91□□□□□ -2.1
LINC00346Q8IVM7 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.91□□□□□ -2.1
LINC00346Q8IVM7 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.91□□□□□ -2.1
LINC00346Q8IVM7 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.91□□□□□ -2.1
LINC00346Q8IVM7 AL355802.3-201ENST00000607571 545 ntBASIC1.91□□□□□ -2.1
LINC00346Q8IVM7 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.91□□□□□ -2.1
LINC00346Q8IVM7 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.91□□□□□ -2.1
LINC00346Q8IVM7 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.91□□□□□ -2.1
LINC00346Q8IVM7 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
LINC00346Q8IVM7 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.91□□□□□ -2.1
LINC00346Q8IVM7 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
LINC00346Q8IVM7 AL359851.1-201ENST00000569460 4997 ntBASIC1.9□□□□□ -2.11
LINC00346Q8IVM7 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
LINC00346Q8IVM7 Y_RNA.179-201ENST00000363844 90 ntBASIC1.9□□□□□ -2.11
LINC00346Q8IVM7 RNA5SP504-201ENST00000410676 117 ntBASIC1.9□□□□□ -2.11
LINC00346Q8IVM7 HMGN2P19-201ENST00000425149 265 ntBASIC1.9□□□□□ -2.11
LINC00346Q8IVM7 AC096638.1-201ENST00000444678 216 ntBASIC1.9□□□□□ -2.11
LINC00346Q8IVM7 MTND4P18-201ENST00000447010 465 ntBASIC1.9□□□□□ -2.11
LINC00346Q8IVM7 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.9□□□□□ -2.11
LINC00346Q8IVM7 SNORA44.1-201ENST00000517031 108 ntBASIC1.9□□□□□ -2.11
LINC00346Q8IVM7 RNU1-117P-201ENST00000517041 158 ntBASIC1.9□□□□□ -2.11
LINC00346Q8IVM7 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.9□□□□□ -2.11
LINC00346Q8IVM7 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.9□□□□□ -2.11
LINC00346Q8IVM7 AC013412.1-201ENST00000610687 192 ntBASIC1.9□□□□□ -2.11
LINC00346Q8IVM7 AC010999.1-201ENST00000611856 324 ntBASIC1.9□□□□□ -2.11
LINC00346Q8IVM7 AL355073.2-201ENST00000612106 557 ntBASIC1.9□□□□□ -2.11
LINC00346Q8IVM7 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.9□□□□□ -2.11
LINC00346Q8IVM7 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.9□□□□□ -2.11
LINC00346Q8IVM7 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.9□□□□□ -2.11
LINC00346Q8IVM7 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.9□□□□□ -2.11
LINC00346Q8IVM7 MTND5P6-201ENST00000422338 1798 ntBASIC1.9□□□□□ -2.11
LINC00346Q8IVM7 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
LINC00346Q8IVM7 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
LINC00346Q8IVM7 RNU6-661P-201ENST00000362409 107 ntBASIC1.89□□□□□ -2.11
LINC00346Q8IVM7 snoU2-30.2-201ENST00000362805 70 ntBASIC1.89□□□□□ -2.11
LINC00346Q8IVM7 RNA5SP37-201ENST00000365420 130 ntBASIC1.89□□□□□ -2.11
LINC00346Q8IVM7 Y_RNA.510-201ENST00000384511 114 ntBASIC1.89□□□□□ -2.11
LINC00346Q8IVM7 RNU4-53P-201ENST00000410828 140 ntBASIC1.89□□□□□ -2.11
LINC00346Q8IVM7 EBAG9P1-201ENST00000418955 543 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 306.4 ms