Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 AC025750.2-201ENST00000442609 450 ntBASIC2.68□□□□□ -1.98
PPP4R4Q6NUP7 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.68□□□□□ -1.98
PPP4R4Q6NUP7 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.68□□□□□ -1.98
PPP4R4Q6NUP7 AL442163.3-201ENST00000554110 156 ntBASIC2.68□□□□□ -1.98
PPP4R4Q6NUP7 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.68□□□□□ -1.98
PPP4R4Q6NUP7 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.68□□□□□ -1.98
PPP4R4Q6NUP7 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
PPP4R4Q6NUP7 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
PPP4R4Q6NUP7 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
PPP4R4Q6NUP7 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
PPP4R4Q6NUP7 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
PPP4R4Q6NUP7 SNORD115-3-201ENST00000363100 82 ntBASIC2.67□□□□□ -1.98
PPP4R4Q6NUP7 RNU6-879P-201ENST00000364328 108 ntBASIC2.67□□□□□ -1.98
PPP4R4Q6NUP7 SNORA16B-201ENST00000364674 135 ntBASIC2.67□□□□□ -1.98
PPP4R4Q6NUP7 SNORD87-201ENST00000364849 89 ntBASIC2.67□□□□□ -1.98
PPP4R4Q6NUP7 RNU6-438P-201ENST00000365561 103 ntBASIC2.67□□□□□ -1.98
PPP4R4Q6NUP7 SNORA11.2-201ENST00000408318 127 ntBASIC2.67□□□□□ -1.98
PPP4R4Q6NUP7 MIR320B2-201ENST00000408479 138 ntBASIC2.67□□□□□ -1.98
PPP4R4Q6NUP7 MIR1283-1-201ENST00000408494 87 ntBASIC2.67□□□□□ -1.98
PPP4R4Q6NUP7 Y_RNA.605-201ENST00000410577 105 ntBASIC2.67□□□□□ -1.98
PPP4R4Q6NUP7 AC007395.1-201ENST00000451333 677 ntBASIC2.67□□□□□ -1.98
PPP4R4Q6NUP7 AC112492.4-201ENST00000456549 352 ntBASIC2.67□□□□□ -1.98
PPP4R4Q6NUP7 AL163540.1-201ENST00000485382 386 ntBASIC2.67□□□□□ -1.98
PPP4R4Q6NUP7 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.67□□□□□ -1.98
PPP4R4Q6NUP7 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.67□□□□□ -1.98
PPP4R4Q6NUP7 RN7SKP49-201ENST00000516675 260 ntBASIC2.67□□□□□ -1.98
PPP4R4Q6NUP7 MIR2355-201ENST00000517199 87 ntBASIC2.67□□□□□ -1.98
PPP4R4Q6NUP7 AC006600.1-201ENST00000572529 153 ntBASIC2.67□□□□□ -1.98
PPP4R4Q6NUP7 VN1R91P-201ENST00000594377 169 ntBASIC2.67□□□□□ -1.98
PPP4R4Q6NUP7 SNORD11B-201ENST00000607707 90 ntBASIC2.67□□□□□ -1.98
PPP4R4Q6NUP7 MTND5P35-201ENST00000557537 1720 ntBASIC2.67□□□□□ -1.98
PPP4R4Q6NUP7 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
PPP4R4Q6NUP7 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
PPP4R4Q6NUP7 RNU1-58P-201ENST00000362413 163 ntBASIC2.66□□□□□ -1.98
PPP4R4Q6NUP7 Y_RNA.179-201ENST00000363844 90 ntBASIC2.66□□□□□ -1.98
PPP4R4Q6NUP7 SNORA54-201ENST00000384281 123 ntBASIC2.66□□□□□ -1.98
PPP4R4Q6NUP7 RNY3P4-201ENST00000384428 101 ntBASIC2.66□□□□□ -1.98
PPP4R4Q6NUP7 RNU6-160P-201ENST00000384591 107 ntBASIC2.66□□□□□ -1.98
PPP4R4Q6NUP7 MIR586-201ENST00000385035 97 ntBASIC2.66□□□□□ -1.98
PPP4R4Q6NUP7 Y_RNA.645-201ENST00000391229 102 ntBASIC2.66□□□□□ -1.98
PPP4R4Q6NUP7 BX510359.4-201ENST00000423750 193 ntBASIC2.66□□□□□ -1.98
PPP4R4Q6NUP7 AL160004.2-201ENST00000432935 350 ntBASIC2.66□□□□□ -1.98
PPP4R4Q6NUP7 MTCO1P44-201ENST00000441935 243 ntBASIC2.66□□□□□ -1.98
PPP4R4Q6NUP7 AC010531.2-201ENST00000465012 153 ntBASIC2.66□□□□□ -1.98
PPP4R4Q6NUP7 AC117440.1-201ENST00000474107 571 ntBASIC2.66□□□□□ -1.98
PPP4R4Q6NUP7 Y_RNA.683-201ENST00000516508 93 ntBASIC2.66□□□□□ -1.98
PPP4R4Q6NUP7 RNU1-117P-201ENST00000517041 158 ntBASIC2.66□□□□□ -1.98
PPP4R4Q6NUP7 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.66□□□□□ -1.98
PPP4R4Q6NUP7 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.66□□□□□ -1.98
PPP4R4Q6NUP7 AC078899.2-201ENST00000595282 212 ntBASIC2.66□□□□□ -1.98
PPP4R4Q6NUP7 AC068205.3-201ENST00000636385 468 ntBASIC2.66□□□□□ -1.98
PPP4R4Q6NUP7 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
PPP4R4Q6NUP7 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
PPP4R4Q6NUP7 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
PPP4R4Q6NUP7 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.65□□□□□ -1.99
PPP4R4Q6NUP7 Y_RNA.39-201ENST00000362620 98 ntBASIC2.65□□□□□ -1.99
PPP4R4Q6NUP7 RNU6-1026P-201ENST00000384465 108 ntBASIC2.65□□□□□ -1.99
PPP4R4Q6NUP7 RNA5SP465-201ENST00000391195 109 ntBASIC2.65□□□□□ -1.99
PPP4R4Q6NUP7 MIR300-201ENST00000401138 83 ntBASIC2.65□□□□□ -1.99
PPP4R4Q6NUP7 AL033519.2-201ENST00000403958 392 ntBASIC2.65□□□□□ -1.99
PPP4R4Q6NUP7 MIR1302-11-201ENST00000408051 138 ntBASIC2.65□□□□□ -1.99
PPP4R4Q6NUP7 MIR1302-9-201ENST00000408365 138 ntBASIC2.65□□□□□ -1.99
PPP4R4Q6NUP7 MIR1302-10-201ENST00000408734 138 ntBASIC2.65□□□□□ -1.99
PPP4R4Q6NUP7 RNA5SP450-201ENST00000411206 102 ntBASIC2.65□□□□□ -1.99
PPP4R4Q6NUP7 AC005534.2-201ENST00000431047 433 ntBASIC2.65□□□□□ -1.99
PPP4R4Q6NUP7 CR769767.1-201ENST00000436337 346 ntBASIC2.65□□□□□ -1.99
PPP4R4Q6NUP7 RNU1-131P-201ENST00000458943 161 ntBASIC2.65□□□□□ -1.99
PPP4R4Q6NUP7 AC003982.1-202ENST00000469928 248 ntBASIC2.65□□□□□ -1.99
PPP4R4Q6NUP7 AC010469.2-201ENST00000496412 480 ntBASIC2.65□□□□□ -1.99
PPP4R4Q6NUP7 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.65□□□□□ -1.99
PPP4R4Q6NUP7 MIR1302-2-201ENST00000607096 138 ntBASIC2.65□□□□□ -1.99
PPP4R4Q6NUP7 MIR203B-201ENST00000636080 86 ntBASIC2.65□□□□□ -1.99
PPP4R4Q6NUP7 AC091812.1-201ENST00000432235 1948 ntBASIC2.65□□□□□ -1.99
PPP4R4Q6NUP7 AC092593.1-201ENST00000515413 1815 ntBASIC2.65□□□□□ -1.99
PPP4R4Q6NUP7 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.65□□□□□ -1.99
PPP4R4Q6NUP7 LINC02555-201ENST00000563933 1951 ntBASIC2.65□□□□□ -1.99
PPP4R4Q6NUP7 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
PPP4R4Q6NUP7 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.64□□□□□ -1.99
PPP4R4Q6NUP7 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
PPP4R4Q6NUP7 SNORD114-6-201ENST00000364393 72 ntBASIC2.64□□□□□ -1.99
PPP4R4Q6NUP7 SNORA9.2-201ENST00000365361 133 ntBASIC2.64□□□□□ -1.99
PPP4R4Q6NUP7 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.64□□□□□ -1.99
PPP4R4Q6NUP7 SNORA59A-201ENST00000459326 152 ntBASIC2.64□□□□□ -1.99
PPP4R4Q6NUP7 RNU6-475P-201ENST00000516073 104 ntBASIC2.64□□□□□ -1.99
PPP4R4Q6NUP7 SNORA40.14-201ENST00000516543 86 ntBASIC2.64□□□□□ -1.99
PPP4R4Q6NUP7 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.64□□□□□ -1.99
PPP4R4Q6NUP7 LARP7P3-201ENST00000579888 337 ntBASIC2.64□□□□□ -1.99
PPP4R4Q6NUP7 AC007229.1-201ENST00000590455 412 ntBASIC2.64□□□□□ -1.99
PPP4R4Q6NUP7 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.64□□□□□ -1.99
PPP4R4Q6NUP7 MIR6895-201ENST00000613497 78 ntBASIC2.64□□□□□ -1.99
PPP4R4Q6NUP7 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.64□□□□□ -1.99
PPP4R4Q6NUP7 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
PPP4R4Q6NUP7 RNU5F-3P-201ENST00000363767 117 ntBASIC2.63□□□□□ -1.99
PPP4R4Q6NUP7 SNORA44-201ENST00000384584 132 ntBASIC2.63□□□□□ -1.99
PPP4R4Q6NUP7 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
PPP4R4Q6NUP7 ELOCP21-201ENST00000412558 336 ntBASIC2.63□□□□□ -1.99
PPP4R4Q6NUP7 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.63□□□□□ -1.99
PPP4R4Q6NUP7 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.63□□□□□ -1.99
PPP4R4Q6NUP7 RPL26P26-201ENST00000480251 434 ntBASIC2.63□□□□□ -1.99
PPP4R4Q6NUP7 AC093732.2-201ENST00000607950 274 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 243.8 ms