Protein–RNA interactions for Protein: Q5VT52

RPRD2, Regulation of nuclear pre-mRNA domain-containing protein 2, humanhuman

Known RBP Predictions only

Length 1,461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD2Q5VT52 HULC.1-201ENST00000612720 240 ntBASIC1.11□□□□□ -2.23
RPRD2Q5VT52 MIR3974-201ENST00000637126 96 ntBASIC1.11□□□□□ -2.23
RPRD2Q5VT52 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
RPRD2Q5VT52 ELL2P3-201ENST00000457883 1602 ntBASIC1.1□□□□□ -2.23
RPRD2Q5VT52 Y_RNA.77-201ENST00000362962 107 ntBASIC1.1□□□□□ -2.23
RPRD2Q5VT52 SNORD31B-201ENST00000364977 69 ntBASIC1.1□□□□□ -2.23
RPRD2Q5VT52 RNU6-378P-201ENST00000384324 107 ntBASIC1.1□□□□□ -2.23
RPRD2Q5VT52 RNU6-1235P-201ENST00000384559 107 ntBASIC1.1□□□□□ -2.23
RPRD2Q5VT52 RNU6-1158P-201ENST00000391167 107 ntBASIC1.1□□□□□ -2.23
RPRD2Q5VT52 AL606923.1-201ENST00000406616 190 ntBASIC1.1□□□□□ -2.23
RPRD2Q5VT52 AC012306.1-201ENST00000423267 114 ntBASIC1.1□□□□□ -2.23
RPRD2Q5VT52 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.1□□□□□ -2.23
RPRD2Q5VT52 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.1□□□□□ -2.23
RPRD2Q5VT52 RNU6-498P-201ENST00000459468 107 ntBASIC1.1□□□□□ -2.23
RPRD2Q5VT52 MTCO3P38-201ENST00000468910 766 ntBASIC1.1□□□□□ -2.23
RPRD2Q5VT52 SNORA14.1-201ENST00000516113 141 ntBASIC1.1□□□□□ -2.23
RPRD2Q5VT52 CYCSP23-201ENST00000519781 313 ntBASIC1.1□□□□□ -2.23
RPRD2Q5VT52 AP003034.1-201ENST00000534621 422 ntBASIC1.1□□□□□ -2.23
RPRD2Q5VT52 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.1□□□□□ -2.23
RPRD2Q5VT52 AC009541.1-201ENST00000438279 2662 ntBASIC1.1□□□□□ -2.23
RPRD2Q5VT52 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.09□□□□□ -2.23
RPRD2Q5VT52 Y_RNA.1-201ENST00000352915 104 ntBASIC1.09□□□□□ -2.24
RPRD2Q5VT52 Y_RNA.296-201ENST00000364930 108 ntBASIC1.09□□□□□ -2.24
RPRD2Q5VT52 Y_RNA.518-201ENST00000384552 113 ntBASIC1.09□□□□□ -2.24
RPRD2Q5VT52 Y_RNA.553-201ENST00000384670 102 ntBASIC1.09□□□□□ -2.24
RPRD2Q5VT52 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.09□□□□□ -2.24
RPRD2Q5VT52 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.09□□□□□ -2.24
RPRD2Q5VT52 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.09□□□□□ -2.24
RPRD2Q5VT52 RNU7-14P-201ENST00000459331 62 ntBASIC1.09□□□□□ -2.24
RPRD2Q5VT52 AC130509.1-201ENST00000464158 433 ntBASIC1.09□□□□□ -2.24
RPRD2Q5VT52 RPS23P5-201ENST00000495419 428 ntBASIC1.09□□□□□ -2.24
RPRD2Q5VT52 RNU5F-4P-201ENST00000516581 114 ntBASIC1.09□□□□□ -2.24
RPRD2Q5VT52 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.09□□□□□ -2.24
RPRD2Q5VT52 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.09□□□□□ -2.24
RPRD2Q5VT52 MIR5583-1-201ENST00000580941 59 ntBASIC1.09□□□□□ -2.24
RPRD2Q5VT52 AP001485.1-201ENST00000604799 199 ntBASIC1.09□□□□□ -2.24
RPRD2Q5VT52 AC009994.1-201ENST00000606889 253 ntBASIC1.09□□□□□ -2.24
RPRD2Q5VT52 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.09□□□□□ -2.24
RPRD2Q5VT52 AC017083.3-201ENST00000609955 700 ntBASIC1.09□□□□□ -2.24
RPRD2Q5VT52 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.09□□□□□ -2.24
RPRD2Q5VT52 MIR340-201ENST00000362125 95 ntBASIC1.08□□□□□ -2.24
RPRD2Q5VT52 Y_RNA.280-201ENST00000364765 112 ntBASIC1.08□□□□□ -2.24
RPRD2Q5VT52 SNORA32.2-201ENST00000384049 122 ntBASIC1.08□□□□□ -2.24
RPRD2Q5VT52 Y_RNA.582-201ENST00000391023 95 ntBASIC1.08□□□□□ -2.24
RPRD2Q5VT52 CDK8P2-201ENST00000415020 547 ntBASIC1.08□□□□□ -2.24
RPRD2Q5VT52 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.08□□□□□ -2.24
RPRD2Q5VT52 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.08□□□□□ -2.24
RPRD2Q5VT52 SNRPEP8-201ENST00000442866 260 ntBASIC1.08□□□□□ -2.24
RPRD2Q5VT52 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.08□□□□□ -2.24
RPRD2Q5VT52 AC098826.2-201ENST00000452011 651 ntBASIC1.08□□□□□ -2.24
RPRD2Q5VT52 AC016925.1-201ENST00000458303 298 ntBASIC1.08□□□□□ -2.24
RPRD2Q5VT52 FAM206BP-201ENST00000510179 541 ntBASIC1.08□□□□□ -2.24
RPRD2Q5VT52 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.08□□□□□ -2.24
RPRD2Q5VT52 AC091874.1-201ENST00000511402 339 ntBASIC1.08□□□□□ -2.24
RPRD2Q5VT52 RNU6-1098P-201ENST00000516772 96 ntBASIC1.08□□□□□ -2.24
RPRD2Q5VT52 MIR4711-201ENST00000578274 70 ntBASIC1.08□□□□□ -2.24
RPRD2Q5VT52 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.08□□□□□ -2.24
RPRD2Q5VT52 AC119751.7-201ENST00000600494 245 ntBASIC1.08□□□□□ -2.24
RPRD2Q5VT52 AC103705.1-201ENST00000619013 241 ntBASIC1.08□□□□□ -2.24
RPRD2Q5VT52 SNORA43.4-201ENST00000629559 138 ntBASIC1.08□□□□□ -2.24
RPRD2Q5VT52 AC245060.5-201ENST00000610778 3293 ntBASIC1.08□□□□□ -2.24
RPRD2Q5VT52 RNU1-76P-201ENST00000362903 159 ntBASIC1.07□□□□□ -2.24
RPRD2Q5VT52 RNU6-939P-201ENST00000384634 107 ntBASIC1.07□□□□□ -2.24
RPRD2Q5VT52 RNA5SP219-201ENST00000390940 113 ntBASIC1.07□□□□□ -2.24
RPRD2Q5VT52 RNA5SP193-201ENST00000410353 107 ntBASIC1.07□□□□□ -2.24
RPRD2Q5VT52 MTCO1P21-201ENST00000416634 589 ntBASIC1.07□□□□□ -2.24
RPRD2Q5VT52 AC139712.2-201ENST00000424302 339 ntBASIC1.07□□□□□ -2.24
RPRD2Q5VT52 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
RPRD2Q5VT52 AL606489.2-201ENST00000433886 234 ntBASIC1.07□□□□□ -2.24
RPRD2Q5VT52 MTCO1P19-201ENST00000443487 500 ntBASIC1.07□□□□□ -2.24
RPRD2Q5VT52 TPTE2P5-203ENST00000458118 728 ntBASIC1.07□□□□□ -2.24
RPRD2Q5VT52 AC010409.1-201ENST00000487382 476 ntBASIC1.07□□□□□ -2.24
RPRD2Q5VT52 AC091885.1-201ENST00000506658 268 ntBASIC1.07□□□□□ -2.24
RPRD2Q5VT52 CCDC34P1-201ENST00000507441 517 ntBASIC1.07□□□□□ -2.24
RPRD2Q5VT52 AC091133.4-201ENST00000511142 308 ntBASIC1.07□□□□□ -2.24
RPRD2Q5VT52 AC010486.3-201ENST00000511602 785 ntBASIC1.07□□□□□ -2.24
RPRD2Q5VT52 RNU6-189P-201ENST00000516120 101 ntBASIC1.07□□□□□ -2.24
RPRD2Q5VT52 SNORA40.12-201ENST00000516329 111 ntBASIC1.07□□□□□ -2.24
RPRD2Q5VT52 SUMO2P18-201ENST00000518873 252 ntBASIC1.07□□□□□ -2.24
RPRD2Q5VT52 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.07□□□□□ -2.24
RPRD2Q5VT52 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.07□□□□□ -2.24
RPRD2Q5VT52 MIR8074-201ENST00000615081 81 ntBASIC1.07□□□□□ -2.24
RPRD2Q5VT52 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC1.07□□□□□ -2.24
RPRD2Q5VT52 RNU6-562P-201ENST00000362731 107 ntBASIC1.06□□□□□ -2.24
RPRD2Q5VT52 RNU6-227P-201ENST00000362865 103 ntBASIC1.06□□□□□ -2.24
RPRD2Q5VT52 RNU6-112P-201ENST00000363599 104 ntBASIC1.06□□□□□ -2.24
RPRD2Q5VT52 Y_RNA.481-201ENST00000384373 102 ntBASIC1.06□□□□□ -2.24
RPRD2Q5VT52 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
RPRD2Q5VT52 MIR208B-201ENST00000401172 77 ntBASIC1.06□□□□□ -2.24
RPRD2Q5VT52 RNU6ATAC31P-201ENST00000408513 126 ntBASIC1.06□□□□□ -2.24
RPRD2Q5VT52 AL353193.1-201ENST00000421444 268 ntBASIC1.06□□□□□ -2.24
RPRD2Q5VT52 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.06□□□□□ -2.24
RPRD2Q5VT52 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.06□□□□□ -2.24
RPRD2Q5VT52 AC087477.1-201ENST00000465747 340 ntBASIC1.06□□□□□ -2.24
RPRD2Q5VT52 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.06□□□□□ -2.24
RPRD2Q5VT52 AC097473.1-201ENST00000508142 408 ntBASIC1.06□□□□□ -2.24
RPRD2Q5VT52 RNU6-1069P-201ENST00000516612 133 ntBASIC1.06□□□□□ -2.24
RPRD2Q5VT52 RNU6-612P-201ENST00000516909 102 ntBASIC1.06□□□□□ -2.24
RPRD2Q5VT52 SNORA31.17-201ENST00000516953 127 ntBASIC1.06□□□□□ -2.24
RPRD2Q5VT52 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms