Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 RNU6-1181P-201ENST00000384191 106 ntBASIC4.54□□□□□ -1.68
RC3H1Q5TC82 RNU6-1197P-201ENST00000391183 107 ntBASIC4.54□□□□□ -1.68
RC3H1Q5TC82 RNU2-55P-201ENST00000411146 174 ntBASIC4.54□□□□□ -1.68
RC3H1Q5TC82 NDUFS5P4-201ENST00000412983 318 ntBASIC4.54□□□□□ -1.68
RC3H1Q5TC82 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.54□□□□□ -1.68
RC3H1Q5TC82 RNU5F-2P-201ENST00000516066 82 ntBASIC4.54□□□□□ -1.68
RC3H1Q5TC82 AL160236.1-201ENST00000556317 195 ntBASIC4.54□□□□□ -1.68
RC3H1Q5TC82 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RC3H1Q5TC82 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
RC3H1Q5TC82 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
RC3H1Q5TC82 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
RC3H1Q5TC82 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RC3H1Q5TC82 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RC3H1Q5TC82 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RC3H1Q5TC82 RNU1-75P-201ENST00000347264 129 ntBASIC4.53□□□□□ -1.68
RC3H1Q5TC82 RNU6-1107P-201ENST00000364817 104 ntBASIC4.53□□□□□ -1.68
RC3H1Q5TC82 RNU6-1080P-201ENST00000383982 107 ntBASIC4.53□□□□□ -1.68
RC3H1Q5TC82 AC004552.1-201ENST00000419089 348 ntBASIC4.53□□□□□ -1.68
RC3H1Q5TC82 AC027124.2-201ENST00000428249 105 ntBASIC4.53□□□□□ -1.68
RC3H1Q5TC82 HMGN2P32-201ENST00000444648 269 ntBASIC4.53□□□□□ -1.68
RC3H1Q5TC82 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC4.53□□□□□ -1.68
RC3H1Q5TC82 RPS26P3-201ENST00000470205 348 ntBASIC4.53□□□□□ -1.68
RC3H1Q5TC82 AC090543.2-201ENST00000483963 348 ntBASIC4.53□□□□□ -1.68
RC3H1Q5TC82 AC004057.1-201ENST00000485827 348 ntBASIC4.53□□□□□ -1.68
RC3H1Q5TC82 AC078817.1-201ENST00000492623 435 ntBASIC4.53□□□□□ -1.68
RC3H1Q5TC82 RPL30P5-201ENST00000494923 336 ntBASIC4.53□□□□□ -1.68
RC3H1Q5TC82 IGKV2-26-201ENST00000518305 343 ntBASIC4.53□□□□□ -1.68
RC3H1Q5TC82 PCGEM1.1-201ENST00000613431 131 ntBASIC4.53□□□□□ -1.68
RC3H1Q5TC82 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
RC3H1Q5TC82 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC4.53□□□□□ -1.68
RC3H1Q5TC82 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC4.53□□□□□ -1.68
RC3H1Q5TC82 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.53□□□□□ -1.68
RC3H1Q5TC82 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.53□□□□□ -1.68
RC3H1Q5TC82 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.69
RC3H1Q5TC82 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
RC3H1Q5TC82 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.52□□□□□ -1.69
RC3H1Q5TC82 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
RC3H1Q5TC82 RNU6-508P-201ENST00000363231 103 ntBASIC4.52□□□□□ -1.69
RC3H1Q5TC82 Y_RNA.328-201ENST00000365208 113 ntBASIC4.52□□□□□ -1.69
RC3H1Q5TC82 Y_RNA.432-201ENST00000384087 111 ntBASIC4.52□□□□□ -1.69
RC3H1Q5TC82 RNA5SP496-201ENST00000391240 109 ntBASIC4.52□□□□□ -1.69
RC3H1Q5TC82 CYCSP48-201ENST00000417124 323 ntBASIC4.52□□□□□ -1.69
RC3H1Q5TC82 AL139281.1-201ENST00000422120 335 ntBASIC4.52□□□□□ -1.69
RC3H1Q5TC82 TRBV12-2-201ENST00000489763 344 ntBASIC4.52□□□□□ -1.69
RC3H1Q5TC82 RPS27AP10-201ENST00000496103 208 ntBASIC4.52□□□□□ -1.69
RC3H1Q5TC82 RNU6-579P-201ENST00000516879 102 ntBASIC4.52□□□□□ -1.69
RC3H1Q5TC82 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.52□□□□□ -1.69
RC3H1Q5TC82 MIR4513-201ENST00000581077 86 ntBASIC4.52□□□□□ -1.69
RC3H1Q5TC82 MIR4325-201ENST00000583049 90 ntBASIC4.52□□□□□ -1.69
RC3H1Q5TC82 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.52□□□□□ -1.69
RC3H1Q5TC82 AP003357.1-201ENST00000604497 148 ntBASIC4.52□□□□□ -1.69
RC3H1Q5TC82 AL137843.1-201ENST00000605078 385 ntBASIC4.52□□□□□ -1.69
RC3H1Q5TC82 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.52□□□□□ -1.69
RC3H1Q5TC82 AP003355.3-201ENST00000623465 114 ntBASIC4.52□□□□□ -1.69
RC3H1Q5TC82 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RC3H1Q5TC82 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RC3H1Q5TC82 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RC3H1Q5TC82 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RC3H1Q5TC82 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RC3H1Q5TC82 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
RC3H1Q5TC82 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
RC3H1Q5TC82 U3.8-201ENST00000363675 217 ntBASIC4.51□□□□□ -1.69
RC3H1Q5TC82 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.51□□□□□ -1.69
RC3H1Q5TC82 RNU6-756P-201ENST00000383997 107 ntBASIC4.51□□□□□ -1.69
RC3H1Q5TC82 RNU6-484P-201ENST00000384016 107 ntBASIC4.51□□□□□ -1.69
RC3H1Q5TC82 MIR518C-201ENST00000384822 101 ntBASIC4.51□□□□□ -1.69
RC3H1Q5TC82 RN7SKP101-201ENST00000411376 320 ntBASIC4.51□□□□□ -1.69
RC3H1Q5TC82 AL356535.1-201ENST00000440335 398 ntBASIC4.51□□□□□ -1.69
RC3H1Q5TC82 HMGN2P10-201ENST00000448085 265 ntBASIC4.51□□□□□ -1.69
RC3H1Q5TC82 S100A11P2-201ENST00000467589 312 ntBASIC4.51□□□□□ -1.69
RC3H1Q5TC82 AC005921.1-201ENST00000510589 286 ntBASIC4.51□□□□□ -1.69
RC3H1Q5TC82 MIR5006-201ENST00000583027 110 ntBASIC4.51□□□□□ -1.69
RC3H1Q5TC82 RMST_8.1-201ENST00000610287 165 ntBASIC4.51□□□□□ -1.69
RC3H1Q5TC82 U4.6-201ENST00000621618 127 ntBASIC4.51□□□□□ -1.69
RC3H1Q5TC82 AC087190.4-201ENST00000574616 8334 ntBASIC4.51□□□□□ -1.69
RC3H1Q5TC82 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.51□□□□□ -1.69
RC3H1Q5TC82 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.51□□□□□ -1.69
RC3H1Q5TC82 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.51□□□□□ -1.69
RC3H1Q5TC82 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.51□□□□□ -1.69
RC3H1Q5TC82 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RC3H1Q5TC82 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RC3H1Q5TC82 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.5□□□□□ -1.69
RC3H1Q5TC82 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.5□□□□□ -1.69
RC3H1Q5TC82 USP8P1-201ENST00000494673 3183 ntBASIC4.5□□□□□ -1.69
RC3H1Q5TC82 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RC3H1Q5TC82 RNA5SP173-201ENST00000364857 136 ntBASIC4.5□□□□□ -1.69
RC3H1Q5TC82 RNA5SP201-201ENST00000410316 124 ntBASIC4.5□□□□□ -1.69
RC3H1Q5TC82 AC126124.2-201ENST00000413542 321 ntBASIC4.5□□□□□ -1.69
RC3H1Q5TC82 AC090515.1-201ENST00000465295 476 ntBASIC4.5□□□□□ -1.69
RC3H1Q5TC82 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.5□□□□□ -1.69
RC3H1Q5TC82 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.5□□□□□ -1.69
RC3H1Q5TC82 MIR5004-201ENST00000579078 107 ntBASIC4.5□□□□□ -1.69
RC3H1Q5TC82 AL034555.1-201ENST00000604816 211 ntBASIC4.5□□□□□ -1.69
RC3H1Q5TC82 MIR4727-201ENST00000622232 55 ntBASIC4.5□□□□□ -1.69
RC3H1Q5TC82 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RC3H1Q5TC82 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RC3H1Q5TC82 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
RC3H1Q5TC82 MFSD8-233ENST00000641482 4860 ntBASIC4.49□□□□□ -1.69
RC3H1Q5TC82 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RC3H1Q5TC82 SNORD114-7-201ENST00000362520 77 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms