Protein–RNA interactions for Protein: Q16799

RTN1, Reticulon-1, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1Q16799 MIR15B-201ENST00000385045 98 ntBASIC3.98□□□□□ -1.77
RTN1Q16799 RN7SKP111-201ENST00000410349 271 ntBASIC3.98□□□□□ -1.77
RTN1Q16799 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.98□□□□□ -1.77
RTN1Q16799 HSPE1P21-201ENST00000438283 308 ntBASIC3.98□□□□□ -1.77
RTN1Q16799 RPS4XP2-201ENST00000458402 793 ntBASIC3.98□□□□□ -1.77
RTN1Q16799 PDCD5P2-201ENST00000507570 312 ntBASIC3.98□□□□□ -1.77
RTN1Q16799 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.98□□□□□ -1.77
RTN1Q16799 IGKV2-26-201ENST00000518305 343 ntBASIC3.98□□□□□ -1.77
RTN1Q16799 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.98□□□□□ -1.77
RTN1Q16799 MIR5688-201ENST00000580619 83 ntBASIC3.98□□□□□ -1.77
RTN1Q16799 AC110741.2-201ENST00000605278 268 ntBASIC3.98□□□□□ -1.77
RTN1Q16799 MIR4679-1-201ENST00000637619 75 ntBASIC3.98□□□□□ -1.77
RTN1Q16799 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.98□□□□□ -1.77
RTN1Q16799 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.98□□□□□ -1.77
RTN1Q16799 AC010680.1-201ENST00000590024 3590 ntBASIC3.98□□□□□ -1.77
RTN1Q16799 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RTN1Q16799 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RTN1Q16799 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.97□□□□□ -1.77
RTN1Q16799 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RTN1Q16799 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RTN1Q16799 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
RTN1Q16799 Y_RNA.172-201ENST00000363765 102 ntBASIC3.97□□□□□ -1.77
RTN1Q16799 Y_RNA.229-201ENST00000364347 113 ntBASIC3.97□□□□□ -1.77
RTN1Q16799 RNU6-407P-201ENST00000365280 104 ntBASIC3.97□□□□□ -1.77
RTN1Q16799 SNORD116-14-201ENST00000383894 92 ntBASIC3.97□□□□□ -1.77
RTN1Q16799 SNORD116-17-201ENST00000383929 92 ntBASIC3.97□□□□□ -1.77
RTN1Q16799 RNU6-643P-201ENST00000384018 107 ntBASIC3.97□□□□□ -1.77
RTN1Q16799 SNORD116-15-201ENST00000384445 92 ntBASIC3.97□□□□□ -1.77
RTN1Q16799 SNORD116-19-201ENST00000384729 92 ntBASIC3.97□□□□□ -1.77
RTN1Q16799 MIR490-201ENST00000384865 128 ntBASIC3.97□□□□□ -1.77
RTN1Q16799 MT-TT-201ENST00000387460 66 ntBASIC3.97□□□□□ -1.77
RTN1Q16799 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
RTN1Q16799 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.97□□□□□ -1.77
RTN1Q16799 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.97□□□□□ -1.77
RTN1Q16799 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.97□□□□□ -1.77
RTN1Q16799 AC079598.5-201ENST00000547460 117 ntBASIC3.97□□□□□ -1.77
RTN1Q16799 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.97□□□□□ -1.77
RTN1Q16799 RPL17P51-201ENST00000605218 238 ntBASIC3.97□□□□□ -1.77
RTN1Q16799 RNVU1-4-201ENST00000612985 164 ntBASIC3.97□□□□□ -1.77
RTN1Q16799 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.97□□□□□ -1.77
RTN1Q16799 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.97□□□□□ -1.77
RTN1Q16799 AL136164.4-201ENST00000625013 2135 ntBASIC3.97□□□□□ -1.77
RTN1Q16799 AL356274.2-201ENST00000624379 3752 ntBASIC3.97□□□□□ -1.77
RTN1Q16799 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.96□□□□□ -1.78
RTN1Q16799 MIR423-201ENST00000362201 94 ntBASIC3.96□□□□□ -1.78
RTN1Q16799 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.96□□□□□ -1.78
RTN1Q16799 RNU6-144P-201ENST00000383951 107 ntBASIC3.96□□□□□ -1.78
RTN1Q16799 Y_RNA.525-201ENST00000384570 113 ntBASIC3.96□□□□□ -1.78
RTN1Q16799 MIR586-201ENST00000385035 97 ntBASIC3.96□□□□□ -1.78
RTN1Q16799 RNA5SP252-201ENST00000391131 119 ntBASIC3.96□□□□□ -1.78
RTN1Q16799 AL606845.1-201ENST00000404881 255 ntBASIC3.96□□□□□ -1.78
RTN1Q16799 RHEBP3-201ENST00000411920 351 ntBASIC3.96□□□□□ -1.78
RTN1Q16799 RPL23AP67-201ENST00000465341 474 ntBASIC3.96□□□□□ -1.78
RTN1Q16799 FCF1P8-201ENST00000510322 597 ntBASIC3.96□□□□□ -1.78
RTN1Q16799 AC107934.2-201ENST00000518653 310 ntBASIC3.96□□□□□ -1.78
RTN1Q16799 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.96□□□□□ -1.78
RTN1Q16799 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.96□□□□□ -1.78
RTN1Q16799 MIR4429-201ENST00000580105 73 ntBASIC3.96□□□□□ -1.78
RTN1Q16799 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.96□□□□□ -1.78
RTN1Q16799 uc_338.14-201ENST00000613162 166 ntBASIC3.96□□□□□ -1.78
RTN1Q16799 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RTN1Q16799 PWAR6-201ENST00000552334 4618 ntBASIC3.96□□□□□ -1.78
RTN1Q16799 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.96□□□□□ -1.78
RTN1Q16799 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.96□□□□□ -1.78
RTN1Q16799 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
RTN1Q16799 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.95□□□□□ -1.78
RTN1Q16799 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RTN1Q16799 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
RTN1Q16799 RNA5SP50-201ENST00000363731 107 ntBASIC3.95□□□□□ -1.78
RTN1Q16799 AP002088.1-201ENST00000382740 395 ntBASIC3.95□□□□□ -1.78
RTN1Q16799 Y_RNA.542-201ENST00000384641 111 ntBASIC3.95□□□□□ -1.78
RTN1Q16799 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.95□□□□□ -1.78
RTN1Q16799 RN7SKP27-201ENST00000410684 333 ntBASIC3.95□□□□□ -1.78
RTN1Q16799 AC126124.2-201ENST00000413542 321 ntBASIC3.95□□□□□ -1.78
RTN1Q16799 CENPBD1P1-201ENST00000464061 469 ntBASIC3.95□□□□□ -1.78
RTN1Q16799 RN7SL293P-201ENST00000481765 281 ntBASIC3.95□□□□□ -1.78
RTN1Q16799 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.95□□□□□ -1.78
RTN1Q16799 RNU5F-4P-201ENST00000516581 114 ntBASIC3.95□□□□□ -1.78
RTN1Q16799 RNA5SP309-201ENST00000516670 106 ntBASIC3.95□□□□□ -1.78
RTN1Q16799 SNORA31.21-201ENST00000517180 77 ntBASIC3.95□□□□□ -1.78
RTN1Q16799 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC3.95□□□□□ -1.78
RTN1Q16799 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.95□□□□□ -1.78
RTN1Q16799 LARP7P3-201ENST00000579888 337 ntBASIC3.95□□□□□ -1.78
RTN1Q16799 AC006111.3-201ENST00000622137 383 ntBASIC3.95□□□□□ -1.78
RTN1Q16799 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.94□□□□□ -1.78
RTN1Q16799 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RTN1Q16799 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.94□□□□□ -1.78
RTN1Q16799 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.94□□□□□ -1.78
RTN1Q16799 MIR30E-201ENST00000362104 92 ntBASIC3.94□□□□□ -1.78
RTN1Q16799 RNA5SP119-201ENST00000362715 117 ntBASIC3.94□□□□□ -1.78
RTN1Q16799 RNU6-728P-201ENST00000365375 104 ntBASIC3.94□□□□□ -1.78
RTN1Q16799 RNU6-1228P-201ENST00000391014 107 ntBASIC3.94□□□□□ -1.78
RTN1Q16799 SNORA48.7-201ENST00000391302 135 ntBASIC3.94□□□□□ -1.78
RTN1Q16799 YME1L1P1-201ENST00000429435 297 ntBASIC3.94□□□□□ -1.78
RTN1Q16799 RPL21P129-201ENST00000491732 478 ntBASIC3.94□□□□□ -1.78
RTN1Q16799 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.94□□□□□ -1.78
RTN1Q16799 MIR2276-201ENST00000516886 89 ntBASIC3.94□□□□□ -1.78
RTN1Q16799 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.94□□□□□ -1.78
RTN1Q16799 MIR4425-201ENST00000580572 84 ntBASIC3.94□□□□□ -1.78
RTN1Q16799 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms