Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 AC025754.2-201ENST00000606491 432 ntBASIC2.46□□□□□ -2.02
LTBQ06643 AC011373.1-201ENST00000607270 237 ntBASIC2.46□□□□□ -2.02
LTBQ06643 AC141273.2-201ENST00000618989 130 ntBASIC2.46□□□□□ -2.02
LTBQ06643 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
LTBQ06643 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.46□□□□□ -2.02
LTBQ06643 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
LTBQ06643 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.45□□□□□ -2.02
LTBQ06643 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
LTBQ06643 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.45□□□□□ -2.02
LTBQ06643 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.45□□□□□ -2.02
LTBQ06643 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
LTBQ06643 AL391987.6-201ENST00000305671 199 ntBASIC2.45□□□□□ -2.02
LTBQ06643 SNORD113-8-201ENST00000363497 74 ntBASIC2.45□□□□□ -2.02
LTBQ06643 SNORD27-201ENST00000363981 72 ntBASIC2.45□□□□□ -2.02
LTBQ06643 Y_RNA.416-201ENST00000384014 113 ntBASIC2.45□□□□□ -2.02
LTBQ06643 Y_RNA.539-201ENST00000384635 107 ntBASIC2.45□□□□□ -2.02
LTBQ06643 MIR592-201ENST00000384959 97 ntBASIC2.45□□□□□ -2.02
LTBQ06643 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.45□□□□□ -2.02
LTBQ06643 SNORA26.3-201ENST00000391119 136 ntBASIC2.45□□□□□ -2.02
LTBQ06643 MRPL35P1-201ENST00000404272 572 ntBASIC2.45□□□□□ -2.02
LTBQ06643 Y_RNA.602-201ENST00000410535 92 ntBASIC2.45□□□□□ -2.02
LTBQ06643 RNU6-1001P-201ENST00000411265 100 ntBASIC2.45□□□□□ -2.02
LTBQ06643 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.45□□□□□ -2.02
LTBQ06643 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.45□□□□□ -2.02
LTBQ06643 AC096920.1-201ENST00000423991 241 ntBASIC2.45□□□□□ -2.02
LTBQ06643 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.45□□□□□ -2.02
LTBQ06643 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.45□□□□□ -2.02
LTBQ06643 RNU6-548P-201ENST00000517083 115 ntBASIC2.45□□□□□ -2.02
LTBQ06643 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.45□□□□□ -2.02
LTBQ06643 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.44□□□□□ -2.02
LTBQ06643 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.44□□□□□ -2.02
LTBQ06643 AC092268.1-201ENST00000342691 405 ntBASIC2.44□□□□□ -2.02
LTBQ06643 MIR335-201ENST00000362173 94 ntBASIC2.44□□□□□ -2.02
LTBQ06643 RNU6-529P-201ENST00000363383 104 ntBASIC2.44□□□□□ -2.02
LTBQ06643 RNU6-19P-201ENST00000384718 107 ntBASIC2.44□□□□□ -2.02
LTBQ06643 MIR329-1-201ENST00000385028 80 ntBASIC2.44□□□□□ -2.02
LTBQ06643 MIR549A-201ENST00000385268 96 ntBASIC2.44□□□□□ -2.02
LTBQ06643 Y_RNA.581-201ENST00000391017 97 ntBASIC2.44□□□□□ -2.02
LTBQ06643 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.44□□□□□ -2.02
LTBQ06643 AL590135.1-201ENST00000422215 156 ntBASIC2.44□□□□□ -2.02
LTBQ06643 AC012306.1-201ENST00000423267 114 ntBASIC2.44□□□□□ -2.02
LTBQ06643 AC019205.3-201ENST00000424573 156 ntBASIC2.44□□□□□ -2.02
LTBQ06643 AC104332.2-201ENST00000429959 156 ntBASIC2.44□□□□□ -2.02
LTBQ06643 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.44□□□□□ -2.02
LTBQ06643 RPL26P26-201ENST00000480251 434 ntBASIC2.44□□□□□ -2.02
LTBQ06643 RNU6-496P-201ENST00000516145 99 ntBASIC2.44□□□□□ -2.02
LTBQ06643 RNU6-1338P-201ENST00000516328 91 ntBASIC2.44□□□□□ -2.02
LTBQ06643 RNU5B-3P-201ENST00000516601 115 ntBASIC2.44□□□□□ -2.02
LTBQ06643 RNU6-56P-201ENST00000516986 93 ntBASIC2.44□□□□□ -2.02
LTBQ06643 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.44□□□□□ -2.02
LTBQ06643 AC021231.3-201ENST00000558497 370 ntBASIC2.44□□□□□ -2.02
LTBQ06643 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.44□□□□□ -2.02
LTBQ06643 AC138915.1-201ENST00000565427 1685 ntBASIC2.44□□□□□ -2.02
LTBQ06643 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.44□□□□□ -2.02
LTBQ06643 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
LTBQ06643 Y_RNA.20-201ENST00000362479 113 ntBASIC2.43□□□□□ -2.02
LTBQ06643 RNU6-137P-201ENST00000363680 108 ntBASIC2.43□□□□□ -2.02
LTBQ06643 SNORD115-8-201ENST00000363856 82 ntBASIC2.43□□□□□ -2.02
LTBQ06643 SNORD115-38-201ENST00000365037 82 ntBASIC2.43□□□□□ -2.02
LTBQ06643 RNU6-338P-201ENST00000383888 105 ntBASIC2.43□□□□□ -2.02
LTBQ06643 RNU6-1145P-201ENST00000384246 107 ntBASIC2.43□□□□□ -2.02
LTBQ06643 Y_RNA.478-201ENST00000384358 107 ntBASIC2.43□□□□□ -2.02
LTBQ06643 SNORA26.7-201ENST00000391288 122 ntBASIC2.43□□□□□ -2.02
LTBQ06643 RNU2-14P-201ENST00000411053 191 ntBASIC2.43□□□□□ -2.02
LTBQ06643 PTGES3P4-201ENST00000426243 356 ntBASIC2.43□□□□□ -2.02
LTBQ06643 AL358075.3-201ENST00000426289 226 ntBASIC2.43□□□□□ -2.02
LTBQ06643 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.43□□□□□ -2.02
LTBQ06643 AC005002.2-201ENST00000438228 269 ntBASIC2.43□□□□□ -2.02
LTBQ06643 RAC1P5-201ENST00000512182 576 ntBASIC2.43□□□□□ -2.02
LTBQ06643 RN7SKP49-201ENST00000516675 260 ntBASIC2.43□□□□□ -2.02
LTBQ06643 SCARNA24.2-201ENST00000516968 130 ntBASIC2.43□□□□□ -2.02
LTBQ06643 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.43□□□□□ -2.02
LTBQ06643 AL109918.3-201ENST00000603072 338 ntBASIC2.43□□□□□ -2.02
LTBQ06643 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.43□□□□□ -2.02
LTBQ06643 AC137590.2-201ENST00000619709 240 ntBASIC2.43□□□□□ -2.02
LTBQ06643 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
LTBQ06643 AC010889.1-201ENST00000566193 2666 ntBASIC2.43□□□□□ -2.02
LTBQ06643 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.43□□□□□ -2.02
LTBQ06643 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
LTBQ06643 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.42□□□□□ -2.02
LTBQ06643 Y_RNA.40-201ENST00000362645 93 ntBASIC2.42□□□□□ -2.02
LTBQ06643 RNU6-859P-201ENST00000362728 107 ntBASIC2.42□□□□□ -2.02
LTBQ06643 RNU6-1159P-201ENST00000362933 107 ntBASIC2.42□□□□□ -2.02
LTBQ06643 SNORD81.1-201ENST00000363064 77 ntBASIC2.42□□□□□ -2.02
LTBQ06643 RNU6-961P-201ENST00000363893 105 ntBASIC2.42□□□□□ -2.02
LTBQ06643 Y_RNA.286-201ENST00000364813 102 ntBASIC2.42□□□□□ -2.02
LTBQ06643 SNORD63-201ENST00000384262 68 ntBASIC2.42□□□□□ -2.02
LTBQ06643 AL603910.2-201ENST00000407268 136 ntBASIC2.42□□□□□ -2.02
LTBQ06643 AL591806.2-201ENST00000433122 173 ntBASIC2.42□□□□□ -2.02
LTBQ06643 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.42□□□□□ -2.02
LTBQ06643 HSPE1P25-201ENST00000455484 251 ntBASIC2.42□□□□□ -2.02
LTBQ06643 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.42□□□□□ -2.02
LTBQ06643 RPS27P26-201ENST00000494583 239 ntBASIC2.42□□□□□ -2.02
LTBQ06643 RNU6-991P-201ENST00000516168 107 ntBASIC2.42□□□□□ -2.02
LTBQ06643 SNORD19.2-201ENST00000516978 73 ntBASIC2.42□□□□□ -2.02
LTBQ06643 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.42□□□□□ -2.02
LTBQ06643 AL138963.2-201ENST00000605137 226 ntBASIC2.42□□□□□ -2.02
LTBQ06643 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.42□□□□□ -2.02
LTBQ06643 AL357075.2-201ENST00000614906 189 ntBASIC2.42□□□□□ -2.02
LTBQ06643 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 202.9 ms