Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 SNORD115-41-201ENST00000363608 82 ntBASIC-1.89□□□□□ -2.71
RPL39P62891 SNORD114-25-201ENST00000363742 72 ntBASIC-1.89□□□□□ -2.71
RPL39P62891 RNU6-1207P-201ENST00000384343 107 ntBASIC-1.89□□□□□ -2.71
RPL39P62891 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC-1.89□□□□□ -2.71
RPL39P62891 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC-1.89□□□□□ -2.71
RPL39P62891 AL356583.2-201ENST00000426536 280 ntBASIC-1.89□□□□□ -2.71
RPL39P62891 AL500527.2-201ENST00000454105 95 ntBASIC-1.89□□□□□ -2.71
RPL39P62891 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC-1.89□□□□□ -2.71
RPL39P62891 AC093519.1-201ENST00000566109 298 ntBASIC-1.89□□□□□ -2.71
RPL39P62891 MIR3115-201ENST00000577915 68 ntBASIC-1.89□□□□□ -2.71
RPL39P62891 BNIP3P26-201ENST00000600827 554 ntBASIC-1.89□□□□□ -2.71
RPL39P62891 AC122133.1-201ENST00000613964 233 ntBASIC-1.89□□□□□ -2.71
RPL39P62891 AP003400.6-201ENST00000624698 740 ntBASIC-1.89□□□□□ -2.71
RPL39P62891 ANKRD20A17P-201ENST00000511745 1330 ntBASIC-1.9□□□□□ -2.71
RPL39P62891 MIR409-201ENST00000362237 79 ntBASIC-1.9□□□□□ -2.71
RPL39P62891 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.9□□□□□ -2.71
RPL39P62891 MIR301A-201ENST00000385261 86 ntBASIC-1.9□□□□□ -2.71
RPL39P62891 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC-1.9□□□□□ -2.71
RPL39P62891 RNU6-705P-201ENST00000410601 104 ntBASIC-1.9□□□□□ -2.71
RPL39P62891 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-1.9□□□□□ -2.71
RPL39P62891 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-1.9□□□□□ -2.71
RPL39P62891 SNORA59B-202ENST00000578183 701 ntBASIC-1.9□□□□□ -2.71
RPL39P62891 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC-1.9□□□□□ -2.71
RPL39P62891 MIR4320-201ENST00000636981 65 ntBASIC-1.9□□□□□ -2.71
RPL39P62891 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC-1.91□□□□□ -2.72
RPL39P62891 AC007000.2-201ENST00000442564 487 ntBASIC-1.91□□□□□ -2.72
RPL39P62891 RNA5SP476-201ENST00000516613 103 ntBASIC-1.91□□□□□ -2.72
RPL39P62891 RNU6-706P-201ENST00000517229 104 ntBASIC-1.91□□□□□ -2.72
RPL39P62891 AC090897.1-201ENST00000580909 226 ntBASIC-1.91□□□□□ -2.72
RPL39P62891 RNU1-29P-201ENST00000606574 126 ntBASIC-1.91□□□□□ -2.72
RPL39P62891 AL139286.2-201ENST00000606838 396 ntBASIC-1.91□□□□□ -2.72
RPL39P62891 RNU6-428P-201ENST00000362942 107 ntBASIC-1.92□□□□□ -2.72
RPL39P62891 AL365184.2-201ENST00000431139 435 ntBASIC-1.92□□□□□ -2.72
RPL39P62891 RPS24P1-201ENST00000438550 371 ntBASIC-1.92□□□□□ -2.72
RPL39P62891 HSFY5P-201ENST00000453726 309 ntBASIC-1.92□□□□□ -2.72
RPL39P62891 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC-1.92□□□□□ -2.72
RPL39P62891 RNU6-840P-201ENST00000517275 65 ntBASIC-1.92□□□□□ -2.72
RPL39P62891 AC093023.1-201ENST00000547375 507 ntBASIC-1.92□□□□□ -2.72
RPL39P62891 MIR6828-201ENST00000636181 60 ntBASIC-1.92□□□□□ -2.72
RPL39P62891 RNU6-487P-201ENST00000365430 104 ntBASIC-1.93□□□□□ -2.72
RPL39P62891 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.93□□□□□ -2.72
RPL39P62891 MT-TY-201ENST00000387409 66 ntBASIC-1.93□□□□□ -2.72
RPL39P62891 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.93□□□□□ -2.72
RPL39P62891 RPP40P1-201ENST00000426762 456 ntBASIC-1.93□□□□□ -2.72
RPL39P62891 AC010153.1-201ENST00000432862 727 ntBASIC-1.93□□□□□ -2.72
RPL39P62891 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC-1.93□□□□□ -2.72
RPL39P62891 POLR2KP2-201ENST00000438155 177 ntBASIC-1.93□□□□□ -2.72
RPL39P62891 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-1.93□□□□□ -2.72
RPL39P62891 MIR204-201ENST00000385200 110 ntBASIC-1.94□□□□□ -2.72
RPL39P62891 RNU2-23P-201ENST00000410545 195 ntBASIC-1.94□□□□□ -2.72
RPL39P62891 RNU6-1304P-201ENST00000411374 106 ntBASIC-1.94□□□□□ -2.72
RPL39P62891 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC-1.94□□□□□ -2.72
RPL39P62891 TRIM60P10Y-201ENST00000425589 751 ntBASIC-1.94□□□□□ -2.72
RPL39P62891 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC-1.94□□□□□ -2.72
RPL39P62891 AP000870.1-201ENST00000472927 406 ntBASIC-1.94□□□□□ -2.72
RPL39P62891 AC025459.1-201ENST00000504072 156 ntBASIC-1.94□□□□□ -2.72
RPL39P62891 RNU6-504P-201ENST00000516568 104 ntBASIC-1.94□□□□□ -2.72
RPL39P62891 7SK.7-201ENST00000603504 247 ntBASIC-1.94□□□□□ -2.72
RPL39P62891 AC091304.9-201ENST00000612091 226 ntBASIC-1.94□□□□□ -2.72
RPL39P62891 SEC63P2-201ENST00000503863 1939 ntBASIC-1.94□□□□□ -2.72
RPL39P62891 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC-1.94□□□□□ -2.72
RPL39P62891 RNU6-438P-201ENST00000365561 103 ntBASIC-1.95□□□□□ -2.72
RPL39P62891 AC092809.3-201ENST00000415453 231 ntBASIC-1.95□□□□□ -2.72
RPL39P62891 AL117339.3-201ENST00000418733 162 ntBASIC-1.95□□□□□ -2.72
RPL39P62891 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC-1.95□□□□□ -2.72
RPL39P62891 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC-1.95□□□□□ -2.72
RPL39P62891 AL360271.2-201ENST00000447710 161 ntBASIC-1.95□□□□□ -2.72
RPL39P62891 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC-1.95□□□□□ -2.72
RPL39P62891 AC040926.1-201ENST00000530195 238 ntBASIC-1.95□□□□□ -2.72
RPL39P62891 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC-1.95□□□□□ -2.72
RPL39P62891 AP000484.1-201ENST00000620067 1252 ntBASIC-1.95□□□□□ -2.72
RPL39P62891 RNU4-32P-201ENST00000363404 141 ntBASIC-1.96□□□□□ -2.72
RPL39P62891 Y_RNA.142-201ENST00000363491 102 ntBASIC-1.96□□□□□ -2.72
RPL39P62891 Y_RNA.168-201ENST00000363740 102 ntBASIC-1.96□□□□□ -2.72
RPL39P62891 SNORD32B-201ENST00000364460 84 ntBASIC-1.96□□□□□ -2.72
RPL39P62891 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC-1.96□□□□□ -2.72
RPL39P62891 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC-1.96□□□□□ -2.72
RPL39P62891 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC-1.96□□□□□ -2.72
RPL39P62891 RNA5SP117-201ENST00000365294 118 ntBASIC-1.97□□□□□ -2.72
RPL39P62891 SNORA12.2-201ENST00000391040 156 ntBASIC-1.97□□□□□ -2.72
RPL39P62891 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC-1.97□□□□□ -2.72
RPL39P62891 AL606517.2-201ENST00000442855 241 ntBASIC-1.97□□□□□ -2.72
RPL39P62891 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC-1.97□□□□□ -2.72
RPL39P62891 RNA5SP216-201ENST00000516111 123 ntBASIC-1.97□□□□□ -2.72
RPL39P62891 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-1.97□□□□□ -2.72
RPL39P62891 AC138749.4-201ENST00000563970 127 ntBASIC-1.97□□□□□ -2.72
RPL39P62891 AC140658.3-201ENST00000567603 271 ntBASIC-1.97□□□□□ -2.72
RPL39P62891 AC005332.6-201ENST00000613178 446 ntBASIC-1.97□□□□□ -2.72
RPL39P62891 MIR8054-201ENST00000620877 86 ntBASIC-1.97□□□□□ -2.72
RPL39P62891 AP003072.5-201ENST00000623872 773 ntBASIC-1.97□□□□□ -2.72
RPL39P62891 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC-1.97□□□□□ -2.72
RPL39P62891 SNORD38B-202ENST00000625943 69 ntBASIC-1.97□□□□□ -2.72
RPL39P62891 RNY4P24-201ENST00000362735 96 ntBASIC-1.98□□□□□ -2.73
RPL39P62891 RNU5E-8P-201ENST00000363502 116 ntBASIC-1.98□□□□□ -2.73
RPL39P62891 RNU6-1048P-201ENST00000364054 107 ntBASIC-1.98□□□□□ -2.73
RPL39P62891 RNU6-843P-201ENST00000384454 104 ntBASIC-1.98□□□□□ -2.73
RPL39P62891 Y_RNA.498-201ENST00000384460 102 ntBASIC-1.98□□□□□ -2.73
RPL39P62891 MTCO3P40-201ENST00000392516 676 ntBASIC-1.98□□□□□ -2.73
RPL39P62891 FGFR1OP2P1-201ENST00000395943 500 ntBASIC-1.98□□□□□ -2.73
RPL39P62891 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC-1.98□□□□□ -2.73
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms