Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 RNA5SP54-201ENST00000516951 92 ntBASIC2.71□□□□□ -1.98
COPB1P53618 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.71□□□□□ -1.98
COPB1P53618 MIR3923-201ENST00000579521 83 ntBASIC2.71□□□□□ -1.98
COPB1P53618 AC006006.1-201ENST00000603082 144 ntBASIC2.71□□□□□ -1.98
COPB1P53618 PCGEM1.1-201ENST00000613431 131 ntBASIC2.71□□□□□ -1.98
COPB1P53618 AC005296.1-201ENST00000616145 209 ntBASIC2.71□□□□□ -1.98
COPB1P53618 AC130454.1-201ENST00000622948 401 ntBASIC2.71□□□□□ -1.98
COPB1P53618 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.71□□□□□ -1.98
COPB1P53618 AL359854.1-201ENST00000614203 1594 ntBASIC2.7□□□□□ -1.98
COPB1P53618 MIR21-201ENST00000362134 72 ntBASIC2.7□□□□□ -1.98
COPB1P53618 RNU6-655P-201ENST00000362858 107 ntBASIC2.7□□□□□ -1.98
COPB1P53618 RNU6-1210P-201ENST00000363775 107 ntBASIC2.7□□□□□ -1.98
COPB1P53618 RNU6-879P-201ENST00000364328 108 ntBASIC2.7□□□□□ -1.98
COPB1P53618 RNU6-1145P-201ENST00000384246 107 ntBASIC2.7□□□□□ -1.98
COPB1P53618 RNU6-378P-201ENST00000384324 107 ntBASIC2.7□□□□□ -1.98
COPB1P53618 MT-TW-201ENST00000387382 68 ntBASIC2.7□□□□□ -1.98
COPB1P53618 SNORD78.2-201ENST00000391076 69 ntBASIC2.7□□□□□ -1.98
COPB1P53618 AL079342.1-201ENST00000401460 267 ntBASIC2.7□□□□□ -1.98
COPB1P53618 AL139095.1-201ENST00000404326 391 ntBASIC2.7□□□□□ -1.98
COPB1P53618 EIF4EP4-201ENST00000424916 578 ntBASIC2.7□□□□□ -1.98
COPB1P53618 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.7□□□□□ -1.98
COPB1P53618 AL445305.1-201ENST00000432577 575 ntBASIC2.7□□□□□ -1.98
COPB1P53618 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.7□□□□□ -1.98
COPB1P53618 AL109933.2-201ENST00000452651 260 ntBASIC2.7□□□□□ -1.98
COPB1P53618 RPS3P1-201ENST00000456781 192 ntBASIC2.7□□□□□ -1.98
COPB1P53618 RPL31P41-201ENST00000477967 372 ntBASIC2.7□□□□□ -1.98
COPB1P53618 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.7□□□□□ -1.98
COPB1P53618 RN7SKP49-201ENST00000516675 260 ntBASIC2.7□□□□□ -1.98
COPB1P53618 SNORA40.15-201ENST00000516884 107 ntBASIC2.7□□□□□ -1.98
COPB1P53618 SCARNA11.3-201ENST00000517276 130 ntBASIC2.7□□□□□ -1.98
COPB1P53618 AC136932.1-201ENST00000574771 208 ntBASIC2.7□□□□□ -1.98
COPB1P53618 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.7□□□□□ -1.98
COPB1P53618 MIR4446-201ENST00000578505 67 ntBASIC2.7□□□□□ -1.98
COPB1P53618 MIR5695-201ENST00000579717 85 ntBASIC2.7□□□□□ -1.98
COPB1P53618 MIR4659A-201ENST00000580269 81 ntBASIC2.7□□□□□ -1.98
COPB1P53618 MIR6715A-201ENST00000615929 79 ntBASIC2.7□□□□□ -1.98
COPB1P53618 BX322639.1-202ENST00000423987 2213 ntBASIC2.7□□□□□ -1.98
COPB1P53618 RNA5SP139-201ENST00000364340 117 ntBASIC2.69□□□□□ -1.98
COPB1P53618 Y_RNA.376-201ENST00000365638 108 ntBASIC2.69□□□□□ -1.98
COPB1P53618 Y_RNA.439-201ENST00000384119 94 ntBASIC2.69□□□□□ -1.98
COPB1P53618 MT-TG-201ENST00000387429 68 ntBASIC2.69□□□□□ -1.98
COPB1P53618 RNU6-1093P-201ENST00000391194 107 ntBASIC2.69□□□□□ -1.98
COPB1P53618 MRPL35P1-201ENST00000404272 572 ntBASIC2.69□□□□□ -1.98
COPB1P53618 RNU6-1328P-201ENST00000410938 106 ntBASIC2.69□□□□□ -1.98
COPB1P53618 RNU2-25P-201ENST00000411041 191 ntBASIC2.69□□□□□ -1.98
COPB1P53618 RNU6-1001P-201ENST00000411265 100 ntBASIC2.69□□□□□ -1.98
COPB1P53618 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.69□□□□□ -1.98
COPB1P53618 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.69□□□□□ -1.98
COPB1P53618 RNU2-53P-201ENST00000516257 147 ntBASIC2.69□□□□□ -1.98
COPB1P53618 SNORA31.15-201ENST00000516771 132 ntBASIC2.69□□□□□ -1.98
COPB1P53618 RNA5SP402-201ENST00000517148 110 ntBASIC2.69□□□□□ -1.98
COPB1P53618 AC093023.1-201ENST00000547375 507 ntBASIC2.69□□□□□ -1.98
COPB1P53618 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.69□□□□□ -1.98
COPB1P53618 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.69□□□□□ -1.98
COPB1P53618 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.69□□□□□ -1.98
COPB1P53618 MIR3945-201ENST00000581853 98 ntBASIC2.69□□□□□ -1.98
COPB1P53618 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.69□□□□□ -1.98
COPB1P53618 AC008739.2-201ENST00000597006 317 ntBASIC2.69□□□□□ -1.98
COPB1P53618 AC011476.5-201ENST00000615594 130 ntBASIC2.69□□□□□ -1.98
COPB1P53618 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.69□□□□□ -1.98
COPB1P53618 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
COPB1P53618 AC069528.2-201ENST00000624849 1991 ntBASIC2.69□□□□□ -1.98
COPB1P53618 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
COPB1P53618 RNU6-873P-201ENST00000363833 107 ntBASIC2.68□□□□□ -1.98
COPB1P53618 RNU4-56P-201ENST00000364700 142 ntBASIC2.68□□□□□ -1.98
COPB1P53618 RNU1-51P-201ENST00000365345 176 ntBASIC2.68□□□□□ -1.98
COPB1P53618 RNU6-1083P-201ENST00000384022 107 ntBASIC2.68□□□□□ -1.98
COPB1P53618 Y_RNA.518-201ENST00000384552 113 ntBASIC2.68□□□□□ -1.98
COPB1P53618 MIR27B-201ENST00000385129 97 ntBASIC2.68□□□□□ -1.98
COPB1P53618 MIR549A-201ENST00000385268 96 ntBASIC2.68□□□□□ -1.98
COPB1P53618 SNORD115-46-201ENST00000390982 71 ntBASIC2.68□□□□□ -1.98
COPB1P53618 MIR208B-201ENST00000401172 77 ntBASIC2.68□□□□□ -1.98
COPB1P53618 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.68□□□□□ -1.98
COPB1P53618 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.68□□□□□ -1.98
COPB1P53618 PCNPP5-201ENST00000452246 481 ntBASIC2.68□□□□□ -1.98
COPB1P53618 RPL26P26-201ENST00000480251 434 ntBASIC2.68□□□□□ -1.98
COPB1P53618 RNU6-408P-201ENST00000515910 100 ntBASIC2.68□□□□□ -1.98
COPB1P53618 Y_RNA.713-201ENST00000517013 96 ntBASIC2.68□□□□□ -1.98
COPB1P53618 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.68□□□□□ -1.98
COPB1P53618 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.68□□□□□ -1.98
COPB1P53618 AP003733.2-201ENST00000529409 171 ntBASIC2.68□□□□□ -1.98
COPB1P53618 AC023824.2-201ENST00000566185 400 ntBASIC2.68□□□□□ -1.98
COPB1P53618 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.68□□□□□ -1.98
COPB1P53618 MIR4765-201ENST00000585007 77 ntBASIC2.68□□□□□ -1.98
COPB1P53618 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.68□□□□□ -1.98
COPB1P53618 AC010620.2-201ENST00000600135 313 ntBASIC2.68□□□□□ -1.98
COPB1P53618 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.68□□□□□ -1.98
COPB1P53618 FO624990.1-201ENST00000636373 85 ntBASIC2.68□□□□□ -1.98
COPB1P53618 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
COPB1P53618 ZNF204P-201ENST00000416749 2397 ntBASIC2.67□□□□□ -1.98
COPB1P53618 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.67□□□□□ -1.98
COPB1P53618 OR56A5-201ENST00000340110 738 ntBASIC2.67□□□□□ -1.98
COPB1P53618 RNU6-280P-201ENST00000364145 104 ntBASIC2.67□□□□□ -1.98
COPB1P53618 RNU6-713P-201ENST00000384761 107 ntBASIC2.67□□□□□ -1.98
COPB1P53618 SNORD12B-201ENST00000410433 91 ntBASIC2.67□□□□□ -1.98
COPB1P53618 RPL21P38-201ENST00000418090 167 ntBASIC2.67□□□□□ -1.98
COPB1P53618 ARL5AP4-201ENST00000430731 512 ntBASIC2.67□□□□□ -1.98
COPB1P53618 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.67□□□□□ -1.98
COPB1P53618 AC098869.1-201ENST00000481627 292 ntBASIC2.67□□□□□ -1.98
COPB1P53618 RNA5SP320-201ENST00000516263 124 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms