Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
CNGA1P29973 SNORA25B-201ENST00000365507 128 ntBASIC3.09□□□□□ -1.91
CNGA1P29973 MIR181B1-201ENST00000385240 110 ntBASIC3.09□□□□□ -1.91
CNGA1P29973 AL451074.5-201ENST00000415894 435 ntBASIC3.09□□□□□ -1.91
CNGA1P29973 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.09□□□□□ -1.91
CNGA1P29973 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.09□□□□□ -1.91
CNGA1P29973 AC091179.3-201ENST00000474761 144 ntBASIC3.09□□□□□ -1.91
CNGA1P29973 UBL5P3-201ENST00000475112 231 ntBASIC3.09□□□□□ -1.91
CNGA1P29973 RPS23P5-201ENST00000495419 428 ntBASIC3.09□□□□□ -1.91
CNGA1P29973 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.09□□□□□ -1.91
CNGA1P29973 SCARNA15.1-201ENST00000516384 125 ntBASIC3.09□□□□□ -1.91
CNGA1P29973 RNU5F-4P-201ENST00000516581 114 ntBASIC3.09□□□□□ -1.91
CNGA1P29973 RN7SKP49-201ENST00000516675 260 ntBASIC3.09□□□□□ -1.91
CNGA1P29973 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.09□□□□□ -1.91
CNGA1P29973 MIR4680-201ENST00000580906 66 ntBASIC3.09□□□□□ -1.91
CNGA1P29973 AC104695.3-201ENST00000604052 296 ntBASIC3.09□□□□□ -1.91
CNGA1P29973 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.09□□□□□ -1.91
CNGA1P29973 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.09□□□□□ -1.91
CNGA1P29973 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.08□□□□□ -1.92
CNGA1P29973 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.08□□□□□ -1.92
CNGA1P29973 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
CNGA1P29973 RNU6-708P-201ENST00000384217 107 ntBASIC3.08□□□□□ -1.92
CNGA1P29973 RNU6-793P-201ENST00000384233 104 ntBASIC3.08□□□□□ -1.92
CNGA1P29973 RNU6-1145P-201ENST00000384246 107 ntBASIC3.08□□□□□ -1.92
CNGA1P29973 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.08□□□□□ -1.92
CNGA1P29973 AC007395.1-201ENST00000451333 677 ntBASIC3.08□□□□□ -1.92
CNGA1P29973 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.08□□□□□ -1.92
CNGA1P29973 ZNF861P-201ENST00000588126 639 ntBASIC3.08□□□□□ -1.92
CNGA1P29973 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.08□□□□□ -1.92
CNGA1P29973 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
CNGA1P29973 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.07□□□□□ -1.92
CNGA1P29973 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CNGA1P29973 Y_RNA.179-201ENST00000363844 90 ntBASIC3.07□□□□□ -1.92
CNGA1P29973 SNORD14.1-201ENST00000365609 90 ntBASIC3.07□□□□□ -1.92
CNGA1P29973 RNU6-611P-201ENST00000384276 104 ntBASIC3.07□□□□□ -1.92
CNGA1P29973 Y_RNA.526-201ENST00000384572 110 ntBASIC3.07□□□□□ -1.92
CNGA1P29973 MIR592-201ENST00000384959 97 ntBASIC3.07□□□□□ -1.92
CNGA1P29973 AL356057.3-201ENST00000402607 340 ntBASIC3.07□□□□□ -1.92
CNGA1P29973 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.07□□□□□ -1.92
CNGA1P29973 AC009238.1-201ENST00000442165 424 ntBASIC3.07□□□□□ -1.92
CNGA1P29973 AC009237.6-201ENST00000446969 424 ntBASIC3.07□□□□□ -1.92
CNGA1P29973 snoU13.26-201ENST00000459452 105 ntBASIC3.07□□□□□ -1.92
CNGA1P29973 RPS27AP9-201ENST00000477681 438 ntBASIC3.07□□□□□ -1.92
CNGA1P29973 SRP72-202ENST00000504757 745 ntTSL 2 BASIC3.07□□□□□ -1.92
CNGA1P29973 ATP5EP1-201ENST00000510257 156 ntBASIC3.07□□□□□ -1.92
CNGA1P29973 Y_RNA.683-201ENST00000516508 93 ntBASIC3.07□□□□□ -1.92
CNGA1P29973 RNU6-826P-201ENST00000516827 104 ntBASIC3.07□□□□□ -1.92
CNGA1P29973 AC006504.6-201ENST00000590142 199 ntBASIC3.07□□□□□ -1.92
CNGA1P29973 SNORD11B-201ENST00000607707 90 ntBASIC3.07□□□□□ -1.92
CNGA1P29973 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.07□□□□□ -1.92
CNGA1P29973 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CNGA1P29973 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.07□□□□□ -1.92
CNGA1P29973 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CNGA1P29973 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CNGA1P29973 MIR181A2-201ENST00000384863 110 ntBASIC3.06□□□□□ -1.92
CNGA1P29973 IFNA11P-201ENST00000446352 526 ntBASIC3.06□□□□□ -1.92
CNGA1P29973 RNU6-1137P-201ENST00000517073 99 ntBASIC3.06□□□□□ -1.92
CNGA1P29973 RNU6-667P-201ENST00000517186 102 ntBASIC3.06□□□□□ -1.92
CNGA1P29973 AC040926.1-201ENST00000530195 238 ntBASIC3.06□□□□□ -1.92
CNGA1P29973 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.06□□□□□ -1.92
CNGA1P29973 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.06□□□□□ -1.92
CNGA1P29973 MZT1P2-201ENST00000604387 248 ntBASIC3.06□□□□□ -1.92
CNGA1P29973 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.06□□□□□ -1.92
CNGA1P29973 AC008873.1-201ENST00000625051 138 ntBASIC3.06□□□□□ -1.92
CNGA1P29973 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CNGA1P29973 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CNGA1P29973 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CNGA1P29973 MTND5P35-201ENST00000557537 1720 ntBASIC3.05□□□□□ -1.92
CNGA1P29973 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
CNGA1P29973 Y_RNA.424-201ENST00000384063 103 ntBASIC3.05□□□□□ -1.92
CNGA1P29973 SNORA67.2-201ENST00000384300 149 ntBASIC3.05□□□□□ -1.92
CNGA1P29973 RNU6-1160P-201ENST00000384546 104 ntBASIC3.05□□□□□ -1.92
CNGA1P29973 RNA5SP504-201ENST00000410676 117 ntBASIC3.05□□□□□ -1.92
CNGA1P29973 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.05□□□□□ -1.92
CNGA1P29973 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.05□□□□□ -1.92
CNGA1P29973 RNU7-14P-201ENST00000459331 62 ntBASIC3.05□□□□□ -1.92
CNGA1P29973 RNU6-1012P-201ENST00000516606 109 ntBASIC3.05□□□□□ -1.92
CNGA1P29973 Y_RNA.721-201ENST00000517207 102 ntBASIC3.05□□□□□ -1.92
CNGA1P29973 AC034114.1-201ENST00000520293 285 ntBASIC3.05□□□□□ -1.92
CNGA1P29973 AC022616.4-201ENST00000522985 181 ntBASIC3.05□□□□□ -1.92
CNGA1P29973 NDUFA5P6-201ENST00000542110 379 ntBASIC3.05□□□□□ -1.92
CNGA1P29973 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.05□□□□□ -1.92
CNGA1P29973 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.05□□□□□ -1.92
CNGA1P29973 MIR4658-201ENST00000584344 65 ntBASIC3.05□□□□□ -1.92
CNGA1P29973 AL162373.1-201ENST00000620433 407 ntBASIC3.05□□□□□ -1.92
CNGA1P29973 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
CNGA1P29973 U6.92-201ENST00000636464 89 ntBASIC3.05□□□□□ -1.92
CNGA1P29973 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.05□□□□□ -1.92
CNGA1P29973 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CNGA1P29973 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.05□□□□□ -1.92
CNGA1P29973 RNU1-109P-201ENST00000383960 147 ntBASIC3.04□□□□□ -1.92
CNGA1P29973 MIR606-201ENST00000384851 96 ntBASIC3.04□□□□□ -1.92
CNGA1P29973 MIR504-201ENST00000385065 83 ntBASIC3.04□□□□□ -1.92
CNGA1P29973 RNU6-823P-201ENST00000391042 103 ntBASIC3.04□□□□□ -1.92
CNGA1P29973 AL590004.2-201ENST00000404787 371 ntBASIC3.04□□□□□ -1.92
CNGA1P29973 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CNGA1P29973 AL357139.1-201ENST00000407792 426 ntBASIC3.04□□□□□ -1.92
CNGA1P29973 Y_RNA.595-201ENST00000410403 105 ntBASIC3.04□□□□□ -1.92
CNGA1P29973 SDAD1P3-201ENST00000427380 333 ntBASIC3.04□□□□□ -1.92
CNGA1P29973 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 150.6 ms