Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 Y_RNA.595-201ENST00000410403 105 ntBASIC4□□□□□ -1.77
RXRBP28702 AL137159.1-201ENST00000452808 512 ntBASIC4□□□□□ -1.77
RXRBP28702 MTATP6P7-201ENST00000453315 681 ntBASIC4□□□□□ -1.77
RXRBP28702 RPL30P12-201ENST00000474666 353 ntBASIC4□□□□□ -1.77
RXRBP28702 RNA5SP458-201ENST00000516188 119 ntBASIC4□□□□□ -1.77
RXRBP28702 RNU6-919P-201ENST00000516731 104 ntBASIC4□□□□□ -1.77
RXRBP28702 RNU6-1198P-201ENST00000516904 67 ntBASIC4□□□□□ -1.77
RXRBP28702 RNU6-971P-201ENST00000516920 106 ntBASIC4□□□□□ -1.77
RXRBP28702 AC100767.1-201ENST00000528178 123 ntBASIC4□□□□□ -1.77
RXRBP28702 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4□□□□□ -1.77
RXRBP28702 MIR3690-201ENST00000580266 75 ntBASIC4□□□□□ -1.77
RXRBP28702 AC004467.1-201ENST00000615678 330 ntBASIC4□□□□□ -1.77
RXRBP28702 AC022149.2-201ENST00000621061 203 ntBASIC4□□□□□ -1.77
RXRBP28702 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC4□□□□□ -1.77
RXRBP28702 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC4□□□□□ -1.77
RXRBP28702 AC022336.2-201ENST00000568966 2538 ntBASIC4□□□□□ -1.77
RXRBP28702 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4□□□□□ -1.77
RXRBP28702 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.99□□□□□ -1.77
RXRBP28702 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
RXRBP28702 RNU1-100P-201ENST00000365255 165 ntBASIC3.99□□□□□ -1.77
RXRBP28702 MIR325-201ENST00000385260 98 ntBASIC3.99□□□□□ -1.77
RXRBP28702 MIR888-201ENST00000401186 77 ntBASIC3.99□□□□□ -1.77
RXRBP28702 RN7SKP61-201ENST00000410642 295 ntBASIC3.99□□□□□ -1.77
RXRBP28702 AL159169.1-201ENST00000421119 127 ntBASIC3.99□□□□□ -1.77
RXRBP28702 RAB28P5-201ENST00000427490 651 ntBASIC3.99□□□□□ -1.77
RXRBP28702 AC112220.1-201ENST00000434628 355 ntBASIC3.99□□□□□ -1.77
RXRBP28702 GPM6BP3-201ENST00000442797 145 ntBASIC3.99□□□□□ -1.77
RXRBP28702 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.99□□□□□ -1.77
RXRBP28702 AC006026.2-201ENST00000457376 180 ntBASIC3.99□□□□□ -1.77
RXRBP28702 RNU6-625P-201ENST00000459412 107 ntBASIC3.99□□□□□ -1.77
RXRBP28702 AL121594.1-201ENST00000475906 575 ntBASIC3.99□□□□□ -1.77
RXRBP28702 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.99□□□□□ -1.77
RXRBP28702 RNU6-1282P-201ENST00000516735 96 ntBASIC3.99□□□□□ -1.77
RXRBP28702 CR383656.8-201ENST00000549046 145 ntBASIC3.99□□□□□ -1.77
RXRBP28702 HSPE1P4-201ENST00000550617 308 ntBASIC3.99□□□□□ -1.77
RXRBP28702 MAPK10-373ENST00000641983 6772 ntBASIC3.99□□□□□ -1.77
RXRBP28702 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RXRBP28702 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.98□□□□□ -1.77
RXRBP28702 SNORA40-201ENST00000388090 126 ntBASIC3.98□□□□□ -1.77
RXRBP28702 RNU6-381P-201ENST00000391259 108 ntBASIC3.98□□□□□ -1.77
RXRBP28702 RNU6-1245P-201ENST00000411130 106 ntBASIC3.98□□□□□ -1.77
RXRBP28702 AC002075.2-201ENST00000425207 252 ntBASIC3.98□□□□□ -1.77
RXRBP28702 AC010154.1-201ENST00000425857 269 ntBASIC3.98□□□□□ -1.77
RXRBP28702 RNU6-1333P-201ENST00000516162 93 ntBASIC3.98□□□□□ -1.77
RXRBP28702 SNORA31.23-201ENST00000517219 133 ntBASIC3.98□□□□□ -1.77
RXRBP28702 FTX_3.1-201ENST00000610451 147 ntBASIC3.98□□□□□ -1.77
RXRBP28702 MIR6817-201ENST00000615588 66 ntBASIC3.98□□□□□ -1.77
RXRBP28702 AC068831.7-201ENST00000616954 363 ntBASIC3.98□□□□□ -1.77
RXRBP28702 MIR6134-201ENST00000617606 109 ntBASIC3.98□□□□□ -1.77
RXRBP28702 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RXRBP28702 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
RXRBP28702 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.98□□□□□ -1.77
RXRBP28702 MTND5P35-201ENST00000557537 1720 ntBASIC3.98□□□□□ -1.77
RXRBP28702 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RXRBP28702 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
RXRBP28702 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.97□□□□□ -1.77
RXRBP28702 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
RXRBP28702 RNU6-1141P-201ENST00000364520 107 ntBASIC3.97□□□□□ -1.77
RXRBP28702 SNORD116-14-201ENST00000383894 92 ntBASIC3.97□□□□□ -1.77
RXRBP28702 SNORD116-17-201ENST00000383929 92 ntBASIC3.97□□□□□ -1.77
RXRBP28702 SNORD116-15-201ENST00000384445 92 ntBASIC3.97□□□□□ -1.77
RXRBP28702 SNORD116-19-201ENST00000384729 92 ntBASIC3.97□□□□□ -1.77
RXRBP28702 MIR544A-201ENST00000384855 91 ntBASIC3.97□□□□□ -1.77
RXRBP28702 MIR592-201ENST00000384959 97 ntBASIC3.97□□□□□ -1.77
RXRBP28702 5S_rRNA.2-201ENST00000391293 112 ntBASIC3.97□□□□□ -1.77
RXRBP28702 RPS26P42-201ENST00000413485 326 ntBASIC3.97□□□□□ -1.77
RXRBP28702 CR769767.1-201ENST00000436337 346 ntBASIC3.97□□□□□ -1.77
RXRBP28702 HMGB3P8-201ENST00000449709 577 ntBASIC3.97□□□□□ -1.77
RXRBP28702 RPS3P1-201ENST00000456781 192 ntBASIC3.97□□□□□ -1.77
RXRBP28702 U8.19-201ENST00000459095 133 ntBASIC3.97□□□□□ -1.77
RXRBP28702 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.97□□□□□ -1.77
RXRBP28702 RPL30P5-201ENST00000494923 336 ntBASIC3.97□□□□□ -1.77
RXRBP28702 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.97□□□□□ -1.77
RXRBP28702 TGIF1P1-201ENST00000558095 802 ntBASIC3.97□□□□□ -1.77
RXRBP28702 AC019159.1-201ENST00000605094 187 ntBASIC3.97□□□□□ -1.77
RXRBP28702 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.97□□□□□ -1.77
RXRBP28702 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.97□□□□□ -1.77
RXRBP28702 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RXRBP28702 AC091564.4-201ENST00000533934 2194 ntBASIC3.96□□□□□ -1.78
RXRBP28702 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.96□□□□□ -1.78
RXRBP28702 RNU6-50P-201ENST00000362356 103 ntBASIC3.96□□□□□ -1.78
RXRBP28702 RNU6-1285P-201ENST00000363480 105 ntBASIC3.96□□□□□ -1.78
RXRBP28702 RNU6-799P-201ENST00000363567 107 ntBASIC3.96□□□□□ -1.78
RXRBP28702 RNU6-1325P-201ENST00000364905 105 ntBASIC3.96□□□□□ -1.78
RXRBP28702 SNORA72.2-201ENST00000365028 127 ntBASIC3.96□□□□□ -1.78
RXRBP28702 RNU6-217P-201ENST00000384164 104 ntBASIC3.96□□□□□ -1.78
RXRBP28702 SNORA26.3-201ENST00000391119 136 ntBASIC3.96□□□□□ -1.78
RXRBP28702 FTH1P15-201ENST00000406984 280 ntBASIC3.96□□□□□ -1.78
RXRBP28702 RNU2-54P-201ENST00000410299 190 ntBASIC3.96□□□□□ -1.78
RXRBP28702 AL135790.2-201ENST00000437701 267 ntBASIC3.96□□□□□ -1.78
RXRBP28702 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.96□□□□□ -1.78
RXRBP28702 RPS27P26-201ENST00000494583 239 ntBASIC3.96□□□□□ -1.78
RXRBP28702 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.96□□□□□ -1.78
RXRBP28702 AC016632.1-201ENST00000503994 196 ntBASIC3.96□□□□□ -1.78
RXRBP28702 AC006445.2-201ENST00000510061 472 ntBASIC3.96□□□□□ -1.78
RXRBP28702 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.96□□□□□ -1.78
RXRBP28702 RNU6-155P-201ENST00000516347 100 ntBASIC3.96□□□□□ -1.78
RXRBP28702 RNU6-1234P-201ENST00000516877 103 ntBASIC3.96□□□□□ -1.78
RXRBP28702 RMST_8.1-201ENST00000610287 165 ntBASIC3.96□□□□□ -1.78
RXRBP28702 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms