Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
HOXA2O43364 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.38□□□□□ -1.71
HOXA2O43364 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.38□□□□□ -1.71
HOXA2O43364 AC018555.1-201ENST00000567548 1980 ntBASIC4.38□□□□□ -1.71
HOXA2O43364 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HOXA2O43364 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
HOXA2O43364 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.37□□□□□ -1.71
HOXA2O43364 Y_RNA.116-201ENST00000363292 103 ntBASIC4.37□□□□□ -1.71
HOXA2O43364 Y_RNA.203-201ENST00000364106 102 ntBASIC4.37□□□□□ -1.71
HOXA2O43364 RNU6-309P-201ENST00000364573 106 ntBASIC4.37□□□□□ -1.71
HOXA2O43364 MIR449B-201ENST00000384995 97 ntBASIC4.37□□□□□ -1.71
HOXA2O43364 MIRLET7F2-201ENST00000385277 83 ntBASIC4.37□□□□□ -1.71
HOXA2O43364 RN7SKP167-201ENST00000411047 285 ntBASIC4.37□□□□□ -1.71
HOXA2O43364 SNORA57.3-201ENST00000411095 141 ntBASIC4.37□□□□□ -1.71
HOXA2O43364 MTATP6P21-201ENST00000440681 189 ntBASIC4.37□□□□□ -1.71
HOXA2O43364 RPL21P10-201ENST00000463521 490 ntBASIC4.37□□□□□ -1.71
HOXA2O43364 Y_RNA.677-201ENST00000516401 85 ntBASIC4.37□□□□□ -1.71
HOXA2O43364 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
HOXA2O43364 AC039056.2-201ENST00000622261 511 ntBASIC4.37□□□□□ -1.71
HOXA2O43364 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
HOXA2O43364 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.37□□□□□ -1.71
HOXA2O43364 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HOXA2O43364 AC091152.2-201ENST00000591628 2569 ntBASIC4.37□□□□□ -1.71
HOXA2O43364 AL672167.1-203ENST00000641299 2975 ntBASIC4.37□□□□□ -1.71
HOXA2O43364 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HOXA2O43364 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.37□□□□□ -1.71
HOXA2O43364 AC009487.4-201ENST00000624969 3585 ntBASIC4.37□□□□□ -1.71
HOXA2O43364 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.36□□□□□ -1.71
HOXA2O43364 AC103988.1-201ENST00000566382 2177 ntBASIC4.36□□□□□ -1.71
HOXA2O43364 RNU1-15P-201ENST00000353977 144 ntBASIC4.36□□□□□ -1.71
HOXA2O43364 SNORD35B-201ENST00000363660 87 ntBASIC4.36□□□□□ -1.71
HOXA2O43364 Y_RNA.369-201ENST00000365568 117 ntBASIC4.36□□□□□ -1.71
HOXA2O43364 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.36□□□□□ -1.71
HOXA2O43364 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC4.36□□□□□ -1.71
HOXA2O43364 MIR449C-201ENST00000516047 92 ntBASIC4.36□□□□□ -1.71
HOXA2O43364 RNU7-143P-201ENST00000516781 65 ntBASIC4.36□□□□□ -1.71
HOXA2O43364 AL929325.1-201ENST00000603096 117 ntBASIC4.36□□□□□ -1.71
HOXA2O43364 uc_338.28-201ENST00000612082 187 ntBASIC4.36□□□□□ -1.71
HOXA2O43364 U6.98-201ENST00000637157 84 ntBASIC4.36□□□□□ -1.71
HOXA2O43364 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC4.36□□□□□ -1.71
HOXA2O43364 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC4.36□□□□□ -1.71
HOXA2O43364 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HOXA2O43364 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.36□□□□□ -1.71
HOXA2O43364 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.35□□□□□ -1.71
HOXA2O43364 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HOXA2O43364 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
HOXA2O43364 Y_RNA.52-201ENST00000362760 96 ntBASIC4.35□□□□□ -1.71
HOXA2O43364 RNA5SP97-201ENST00000365006 84 ntBASIC4.35□□□□□ -1.71
HOXA2O43364 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.35□□□□□ -1.71
HOXA2O43364 U6atac.2-201ENST00000408644 118 ntBASIC4.35□□□□□ -1.71
HOXA2O43364 RNA5SP127-201ENST00000411051 133 ntBASIC4.35□□□□□ -1.71
HOXA2O43364 AC008134.1-201ENST00000420943 193 ntBASIC4.35□□□□□ -1.71
HOXA2O43364 Z98742.2-201ENST00000431564 187 ntBASIC4.35□□□□□ -1.71
HOXA2O43364 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC4.35□□□□□ -1.71
HOXA2O43364 AL500522.2-201ENST00000448562 343 ntBASIC4.35□□□□□ -1.71
HOXA2O43364 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.35□□□□□ -1.71
HOXA2O43364 U3.44-201ENST00000458938 192 ntBASIC4.35□□□□□ -1.71
HOXA2O43364 RN7SL271P-201ENST00000487601 295 ntBASIC4.35□□□□□ -1.71
HOXA2O43364 RNU6-412P-201ENST00000516434 106 ntBASIC4.35□□□□□ -1.71
HOXA2O43364 RNU1-104P-201ENST00000517280 175 ntBASIC4.35□□□□□ -1.71
HOXA2O43364 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.35□□□□□ -1.71
HOXA2O43364 MIR4662B-201ENST00000579498 81 ntBASIC4.35□□□□□ -1.71
HOXA2O43364 AC096577.2-201ENST00000611455 153 ntBASIC4.35□□□□□ -1.71
HOXA2O43364 XIST_intron.1-201ENST00000619444 68 ntBASIC4.35□□□□□ -1.71
HOXA2O43364 AC006111.3-201ENST00000622137 383 ntBASIC4.35□□□□□ -1.71
HOXA2O43364 AC058791.1-201ENST00000608412 3198 ntBASIC4.35□□□□□ -1.71
HOXA2O43364 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.34□□□□□ -1.71
HOXA2O43364 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
HOXA2O43364 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
HOXA2O43364 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HOXA2O43364 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HOXA2O43364 RNU6-234P-201ENST00000365229 104 ntBASIC4.34□□□□□ -1.71
HOXA2O43364 RNU6-117P-201ENST00000365415 107 ntBASIC4.34□□□□□ -1.71
HOXA2O43364 MIR624-201ENST00000385217 97 ntBASIC4.34□□□□□ -1.71
HOXA2O43364 MIR591-201ENST00000385290 95 ntBASIC4.34□□□□□ -1.71
HOXA2O43364 RNA5SP372-201ENST00000390836 115 ntBASIC4.34□□□□□ -1.71
HOXA2O43364 HMGN2P8-201ENST00000391458 268 ntBASIC4.34□□□□□ -1.71
HOXA2O43364 RNA5SP38-201ENST00000410750 119 ntBASIC4.34□□□□□ -1.71
HOXA2O43364 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HOXA2O43364 AC016717.1-201ENST00000448918 286 ntBASIC4.34□□□□□ -1.71
HOXA2O43364 RNU6ATAC13P-201ENST00000516152 131 ntBASIC4.34□□□□□ -1.71
HOXA2O43364 RNU6-948P-201ENST00000516374 107 ntBASIC4.34□□□□□ -1.71
HOXA2O43364 SNORA31.21-201ENST00000517180 77 ntBASIC4.34□□□□□ -1.71
HOXA2O43364 MIR3944-201ENST00000581277 108 ntBASIC4.34□□□□□ -1.71
HOXA2O43364 AL022345.2-201ENST00000606307 135 ntBASIC4.34□□□□□ -1.71
HOXA2O43364 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
HOXA2O43364 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
HOXA2O43364 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
HOXA2O43364 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
HOXA2O43364 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
HOXA2O43364 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
HOXA2O43364 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HOXA2O43364 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HOXA2O43364 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HOXA2O43364 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HOXA2O43364 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.33□□□□□ -1.72
HOXA2O43364 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
HOXA2O43364 Y_RNA.111-201ENST00000363248 100 ntBASIC4.33□□□□□ -1.72
HOXA2O43364 MIR1302-4-201ENST00000408701 150 ntBASIC4.33□□□□□ -1.72
HOXA2O43364 RN7SKP156-201ENST00000410308 342 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms