Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 RNU6-1109P-201ENST00000391187 107 ntBASIC2.76□□□□□ -1.97
FOXN3O00409 RNU2-52P-201ENST00000410680 190 ntBASIC2.76□□□□□ -1.97
FOXN3O00409 AC114482.1-201ENST00000418010 247 ntBASIC2.76□□□□□ -1.97
FOXN3O00409 AC009238.1-201ENST00000442165 424 ntBASIC2.76□□□□□ -1.97
FOXN3O00409 AC025750.2-201ENST00000442609 450 ntBASIC2.76□□□□□ -1.97
FOXN3O00409 AC009237.6-201ENST00000446969 424 ntBASIC2.76□□□□□ -1.97
FOXN3O00409 AL139109.1-201ENST00000455491 297 ntBASIC2.76□□□□□ -1.97
FOXN3O00409 SNORD109B-201ENST00000458961 67 ntBASIC2.76□□□□□ -1.97
FOXN3O00409 SNORD109A-201ENST00000459128 67 ntBASIC2.76□□□□□ -1.97
FOXN3O00409 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.76□□□□□ -1.97
FOXN3O00409 RNU6-1198P-201ENST00000516904 67 ntBASIC2.76□□□□□ -1.97
FOXN3O00409 SNORA48.11-201ENST00000517015 89 ntBASIC2.76□□□□□ -1.97
FOXN3O00409 AC022868.1-201ENST00000517767 391 ntBASIC2.76□□□□□ -1.97
FOXN3O00409 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.76□□□□□ -1.97
FOXN3O00409 AC022616.4-201ENST00000522985 181 ntBASIC2.76□□□□□ -1.97
FOXN3O00409 AC004817.2-201ENST00000561794 651 ntBASIC2.76□□□□□ -1.97
FOXN3O00409 MIR5006-201ENST00000583027 110 ntBASIC2.76□□□□□ -1.97
FOXN3O00409 VN1R91P-201ENST00000594377 169 ntBASIC2.76□□□□□ -1.97
FOXN3O00409 AL355297.3-201ENST00000604082 446 ntBASIC2.76□□□□□ -1.97
FOXN3O00409 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.76□□□□□ -1.97
FOXN3O00409 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
FOXN3O00409 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
FOXN3O00409 SNORA80A-201ENST00000363922 136 ntBASIC2.75□□□□□ -1.97
FOXN3O00409 Y_RNA.222-201ENST00000364264 102 ntBASIC2.75□□□□□ -1.97
FOXN3O00409 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
FOXN3O00409 MIR1252-201ENST00000408861 65 ntBASIC2.75□□□□□ -1.97
FOXN3O00409 Y_RNA.592-201ENST00000410274 109 ntBASIC2.75□□□□□ -1.97
FOXN3O00409 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.75□□□□□ -1.97
FOXN3O00409 CBX3P6-201ENST00000430257 527 ntBASIC2.75□□□□□ -1.97
FOXN3O00409 AC004386.2-201ENST00000441858 148 ntBASIC2.75□□□□□ -1.97
FOXN3O00409 AC011753.1-201ENST00000451001 220 ntBASIC2.75□□□□□ -1.97
FOXN3O00409 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.75□□□□□ -1.97
FOXN3O00409 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.75□□□□□ -1.97
FOXN3O00409 U8.22-201ENST00000459141 133 ntBASIC2.75□□□□□ -1.97
FOXN3O00409 SRIP1-201ENST00000489235 288 ntBASIC2.75□□□□□ -1.97
FOXN3O00409 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.75□□□□□ -1.97
FOXN3O00409 AC096725.1-201ENST00000514266 313 ntBASIC2.75□□□□□ -1.97
FOXN3O00409 SNORA4.4-201ENST00000515921 135 ntBASIC2.75□□□□□ -1.97
FOXN3O00409 SNORA25.14-201ENST00000516481 132 ntBASIC2.75□□□□□ -1.97
FOXN3O00409 SNORA40.14-201ENST00000516543 86 ntBASIC2.75□□□□□ -1.97
FOXN3O00409 AC144568.1-201ENST00000520139 137 ntBASIC2.75□□□□□ -1.97
FOXN3O00409 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.75□□□□□ -1.97
FOXN3O00409 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.75□□□□□ -1.97
FOXN3O00409 LARP7P3-201ENST00000579888 337 ntBASIC2.75□□□□□ -1.97
FOXN3O00409 PRR13P7-201ENST00000605538 430 ntBASIC2.75□□□□□ -1.97
FOXN3O00409 AC005562.2-201ENST00000618264 111 ntBASIC2.75□□□□□ -1.97
FOXN3O00409 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
FOXN3O00409 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
FOXN3O00409 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.75□□□□□ -1.97
FOXN3O00409 AL365361.1-201ENST00000566942 3481 ntBASIC2.74□□□□□ -1.97
FOXN3O00409 RNU6-873P-201ENST00000363833 107 ntBASIC2.74□□□□□ -1.97
FOXN3O00409 RNU6-879P-201ENST00000364328 108 ntBASIC2.74□□□□□ -1.97
FOXN3O00409 MIR95-201ENST00000385072 81 ntBASIC2.74□□□□□ -1.97
FOXN3O00409 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
FOXN3O00409 MIR320B2-201ENST00000408479 138 ntBASIC2.74□□□□□ -1.97
FOXN3O00409 COTL1P1-201ENST00000422309 375 ntBASIC2.74□□□□□ -1.97
FOXN3O00409 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.74□□□□□ -1.97
FOXN3O00409 AC007215.1-201ENST00000464893 276 ntBASIC2.74□□□□□ -1.97
FOXN3O00409 ANXA2P1-201ENST00000505539 926 ntBASIC2.74□□□□□ -1.97
FOXN3O00409 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.74□□□□□ -1.97
FOXN3O00409 HMGB3P3-201ENST00000510526 400 ntBASIC2.74□□□□□ -1.97
FOXN3O00409 RNY3P15-201ENST00000516297 97 ntBASIC2.74□□□□□ -1.97
FOXN3O00409 RNU2-44P-201ENST00000516795 194 ntBASIC2.74□□□□□ -1.97
FOXN3O00409 RNU6-667P-201ENST00000517186 102 ntBASIC2.74□□□□□ -1.97
FOXN3O00409 DEFB131C-201ENST00000528817 165 ntBASIC2.74□□□□□ -1.97
FOXN3O00409 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.74□□□□□ -1.97
FOXN3O00409 SNRPGP20-201ENST00000604477 205 ntBASIC2.74□□□□□ -1.97
FOXN3O00409 AL021879.1-201ENST00000611756 288 ntBASIC2.74□□□□□ -1.97
FOXN3O00409 AC005296.1-201ENST00000616145 209 ntBASIC2.74□□□□□ -1.97
FOXN3O00409 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
FOXN3O00409 Y_RNA.64-201ENST00000362845 102 ntBASIC2.73□□□□□ -1.97
FOXN3O00409 RNU6-727P-201ENST00000363592 107 ntBASIC2.73□□□□□ -1.97
FOXN3O00409 SNORA25B-201ENST00000365507 128 ntBASIC2.73□□□□□ -1.97
FOXN3O00409 Y_RNA.471-201ENST00000384312 102 ntBASIC2.73□□□□□ -1.97
FOXN3O00409 RNU6-713P-201ENST00000384761 107 ntBASIC2.73□□□□□ -1.97
FOXN3O00409 RPL21P1-201ENST00000399532 476 ntBASIC2.73□□□□□ -1.97
FOXN3O00409 ELOCP20-201ENST00000422460 345 ntBASIC2.73□□□□□ -1.97
FOXN3O00409 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.73□□□□□ -1.97
FOXN3O00409 AC108938.1-201ENST00000451204 136 ntBASIC2.73□□□□□ -1.97
FOXN3O00409 RNU7-14P-201ENST00000459331 62 ntBASIC2.73□□□□□ -1.97
FOXN3O00409 RNU6-1098P-201ENST00000516772 96 ntBASIC2.73□□□□□ -1.97
FOXN3O00409 RNA5SP54-201ENST00000516951 92 ntBASIC2.73□□□□□ -1.97
FOXN3O00409 RNU1-117P-201ENST00000517041 158 ntBASIC2.73□□□□□ -1.97
FOXN3O00409 RNU6-1271P-201ENST00000517049 105 ntBASIC2.73□□□□□ -1.97
FOXN3O00409 AC022616.8-201ENST00000533569 253 ntBASIC2.73□□□□□ -1.97
FOXN3O00409 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.73□□□□□ -1.97
FOXN3O00409 MYL12BP1-201ENST00000569826 507 ntBASIC2.73□□□□□ -1.97
FOXN3O00409 AC090617.3-201ENST00000573670 475 ntBASIC2.73□□□□□ -1.97
FOXN3O00409 MIR4298-201ENST00000584380 73 ntBASIC2.73□□□□□ -1.97
FOXN3O00409 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.73□□□□□ -1.97
FOXN3O00409 AL138825.1-201ENST00000618587 192 ntBASIC2.73□□□□□ -1.97
FOXN3O00409 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.73□□□□□ -1.97
FOXN3O00409 MIR1248-201ENST00000629190 106 ntBASIC2.73□□□□□ -1.97
FOXN3O00409 AC243829.7-201ENST00000633081 225 ntBASIC2.73□□□□□ -1.97
FOXN3O00409 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
FOXN3O00409 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
FOXN3O00409 ZNF271P-202ENST00000465539 1970 ntBASIC2.72□□□□□ -1.97
FOXN3O00409 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
FOXN3O00409 RNU6-859P-201ENST00000362728 107 ntBASIC2.72□□□□□ -1.97
FOXN3O00409 Y_RNA.307-201ENST00000365022 117 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 124.6 ms