Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 C8orf59P2-201ENST00000603441 271 ntBASIC1.85□□□□□ -2.11
TRBV4-1A0A0J9YWV2 AC025754.2-201ENST00000606491 432 ntBASIC1.85□□□□□ -2.11
TRBV4-1A0A0J9YWV2 AC133104.2-201ENST00000615272 193 ntBASIC1.85□□□□□ -2.11
TRBV4-1A0A0J9YWV2 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.85□□□□□ -2.11
TRBV4-1A0A0J9YWV2 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC1.84□□□□□ -2.11
TRBV4-1A0A0J9YWV2 RNU1-62P-201ENST00000362599 164 ntBASIC1.84□□□□□ -2.11
TRBV4-1A0A0J9YWV2 RNU6-873P-201ENST00000363833 107 ntBASIC1.84□□□□□ -2.11
TRBV4-1A0A0J9YWV2 Y_RNA.364-201ENST00000365532 101 ntBASIC1.84□□□□□ -2.11
TRBV4-1A0A0J9YWV2 SNORA67.2-201ENST00000384300 149 ntBASIC1.84□□□□□ -2.11
TRBV4-1A0A0J9YWV2 Y_RNA.577-201ENST00000384794 101 ntBASIC1.84□□□□□ -2.11
TRBV4-1A0A0J9YWV2 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
TRBV4-1A0A0J9YWV2 MIR300-201ENST00000401138 83 ntBASIC1.84□□□□□ -2.11
TRBV4-1A0A0J9YWV2 AL023284.1-201ENST00000403956 276 ntBASIC1.84□□□□□ -2.11
TRBV4-1A0A0J9YWV2 RNU4-53P-201ENST00000410828 140 ntBASIC1.84□□□□□ -2.11
TRBV4-1A0A0J9YWV2 MTCO2P27-201ENST00000420740 428 ntBASIC1.84□□□□□ -2.11
TRBV4-1A0A0J9YWV2 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.84□□□□□ -2.11
TRBV4-1A0A0J9YWV2 RPL23AP50-201ENST00000434149 455 ntBASIC1.84□□□□□ -2.11
TRBV4-1A0A0J9YWV2 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.84□□□□□ -2.11
TRBV4-1A0A0J9YWV2 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.84□□□□□ -2.11
TRBV4-1A0A0J9YWV2 AC022493.2-201ENST00000506122 481 ntBASIC1.84□□□□□ -2.11
TRBV4-1A0A0J9YWV2 AC093303.1-201ENST00000514549 295 ntBASIC1.84□□□□□ -2.11
TRBV4-1A0A0J9YWV2 RNU6-1114P-201ENST00000516022 107 ntBASIC1.84□□□□□ -2.11
TRBV4-1A0A0J9YWV2 RNA5SP364-201ENST00000516938 78 ntBASIC1.84□□□□□ -2.11
TRBV4-1A0A0J9YWV2 MIR5089-201ENST00000580047 84 ntBASIC1.84□□□□□ -2.11
TRBV4-1A0A0J9YWV2 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
TRBV4-1A0A0J9YWV2 Y_RNA.783-201ENST00000613546 102 ntBASIC1.84□□□□□ -2.11
TRBV4-1A0A0J9YWV2 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.84□□□□□ -2.11
TRBV4-1A0A0J9YWV2 AC084781.2-201ENST00000615568 161 ntBASIC1.84□□□□□ -2.11
TRBV4-1A0A0J9YWV2 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.84□□□□□ -2.12
TRBV4-1A0A0J9YWV2 MTND5P16-201ENST00000460269 1703 ntBASIC1.83□□□□□ -2.12
TRBV4-1A0A0J9YWV2 RNU6-222P-201ENST00000362438 107 ntBASIC1.83□□□□□ -2.12
TRBV4-1A0A0J9YWV2 RNU6-545P-201ENST00000362681 104 ntBASIC1.83□□□□□ -2.12
TRBV4-1A0A0J9YWV2 Y_RNA.58-201ENST00000362807 102 ntBASIC1.83□□□□□ -2.12
TRBV4-1A0A0J9YWV2 Y_RNA.154-201ENST00000363624 102 ntBASIC1.83□□□□□ -2.12
TRBV4-1A0A0J9YWV2 RNU6-280P-201ENST00000364145 104 ntBASIC1.83□□□□□ -2.12
TRBV4-1A0A0J9YWV2 RNU6-99P-201ENST00000364721 107 ntBASIC1.83□□□□□ -2.12
TRBV4-1A0A0J9YWV2 RNY3P1-201ENST00000365085 102 ntBASIC1.83□□□□□ -2.12
TRBV4-1A0A0J9YWV2 RNY3-201ENST00000365484 102 ntBASIC1.83□□□□□ -2.12
TRBV4-1A0A0J9YWV2 RNU6-438P-201ENST00000365561 103 ntBASIC1.83□□□□□ -2.12
TRBV4-1A0A0J9YWV2 XGY1-201ENST00000381172 446 ntBASIC1.83□□□□□ -2.12
TRBV4-1A0A0J9YWV2 Y_RNA.509-201ENST00000384506 99 ntBASIC1.83□□□□□ -2.12
TRBV4-1A0A0J9YWV2 MIR559-201ENST00000385188 96 ntBASIC1.83□□□□□ -2.12
TRBV4-1A0A0J9YWV2 MIR1283-1-201ENST00000408494 87 ntBASIC1.83□□□□□ -2.12
TRBV4-1A0A0J9YWV2 MIR1283-2-201ENST00000408621 87 ntBASIC1.83□□□□□ -2.12
TRBV4-1A0A0J9YWV2 AC007098.1-201ENST00000420122 367 ntBASIC1.83□□□□□ -2.12
TRBV4-1A0A0J9YWV2 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.83□□□□□ -2.12
TRBV4-1A0A0J9YWV2 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC1.83□□□□□ -2.12
TRBV4-1A0A0J9YWV2 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.83□□□□□ -2.12
TRBV4-1A0A0J9YWV2 MTCO1P44-201ENST00000441935 243 ntBASIC1.83□□□□□ -2.12
TRBV4-1A0A0J9YWV2 AC096638.1-201ENST00000444678 216 ntBASIC1.83□□□□□ -2.12
TRBV4-1A0A0J9YWV2 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.83□□□□□ -2.12
TRBV4-1A0A0J9YWV2 SNORA25.14-201ENST00000516481 132 ntBASIC1.83□□□□□ -2.12
TRBV4-1A0A0J9YWV2 RNU2-19P-201ENST00000517288 84 ntBASIC1.83□□□□□ -2.12
TRBV4-1A0A0J9YWV2 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.83□□□□□ -2.12
TRBV4-1A0A0J9YWV2 RRN3P3-201ENST00000549207 578 ntBASIC1.83□□□□□ -2.12
TRBV4-1A0A0J9YWV2 SNRPGP19-201ENST00000603826 189 ntBASIC1.83□□□□□ -2.12
TRBV4-1A0A0J9YWV2 AC008873.1-201ENST00000625051 138 ntBASIC1.83□□□□□ -2.12
TRBV4-1A0A0J9YWV2 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
TRBV4-1A0A0J9YWV2 LINC02555-201ENST00000563933 1951 ntBASIC1.83□□□□□ -2.12
TRBV4-1A0A0J9YWV2 MTND5P10-201ENST00000603719 1809 ntBASIC1.82□□□□□ -2.12
TRBV4-1A0A0J9YWV2 Y_RNA.187-201ENST00000363918 113 ntBASIC1.82□□□□□ -2.12
TRBV4-1A0A0J9YWV2 SNORD114-6-201ENST00000364393 72 ntBASIC1.82□□□□□ -2.12
TRBV4-1A0A0J9YWV2 RNU6-1040P-201ENST00000383974 107 ntBASIC1.82□□□□□ -2.12
TRBV4-1A0A0J9YWV2 RNU6-281P-201ENST00000384212 103 ntBASIC1.82□□□□□ -2.12
TRBV4-1A0A0J9YWV2 RNU6-1026P-201ENST00000384465 108 ntBASIC1.82□□□□□ -2.12
TRBV4-1A0A0J9YWV2 MIR586-201ENST00000385035 97 ntBASIC1.82□□□□□ -2.12
TRBV4-1A0A0J9YWV2 NDUFB4P4-201ENST00000404822 243 ntBASIC1.82□□□□□ -2.12
TRBV4-1A0A0J9YWV2 RNA5SP504-201ENST00000410676 117 ntBASIC1.82□□□□□ -2.12
TRBV4-1A0A0J9YWV2 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.82□□□□□ -2.12
TRBV4-1A0A0J9YWV2 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.82□□□□□ -2.12
TRBV4-1A0A0J9YWV2 EIF1P2-201ENST00000428233 350 ntBASIC1.82□□□□□ -2.12
TRBV4-1A0A0J9YWV2 USP9YP16-201ENST00000430287 407 ntBASIC1.82□□□□□ -2.12
TRBV4-1A0A0J9YWV2 AC236972.2-201ENST00000434979 310 ntBASIC1.82□□□□□ -2.12
TRBV4-1A0A0J9YWV2 USP9YP23-201ENST00000455085 407 ntBASIC1.82□□□□□ -2.12
TRBV4-1A0A0J9YWV2 RNU1-131P-201ENST00000458943 161 ntBASIC1.82□□□□□ -2.12
TRBV4-1A0A0J9YWV2 AC055731.1-201ENST00000474387 401 ntBASIC1.82□□□□□ -2.12
TRBV4-1A0A0J9YWV2 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.82□□□□□ -2.12
TRBV4-1A0A0J9YWV2 AC090617.3-201ENST00000573670 475 ntBASIC1.82□□□□□ -2.12
TRBV4-1A0A0J9YWV2 MIR4529-201ENST00000578110 78 ntBASIC1.82□□□□□ -2.12
TRBV4-1A0A0J9YWV2 MIR4448-201ENST00000584360 86 ntBASIC1.82□□□□□ -2.12
TRBV4-1A0A0J9YWV2 AC126177.8-201ENST00000618339 1015 ntBASIC1.82□□□□□ -2.12
TRBV4-1A0A0J9YWV2 MIR6873-201ENST00000622788 63 ntBASIC1.82□□□□□ -2.12
TRBV4-1A0A0J9YWV2 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.82□□□□□ -2.12
TRBV4-1A0A0J9YWV2 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
TRBV4-1A0A0J9YWV2 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
TRBV4-1A0A0J9YWV2 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
TRBV4-1A0A0J9YWV2 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
TRBV4-1A0A0J9YWV2 RNU1-58P-201ENST00000362413 163 ntBASIC1.81□□□□□ -2.12
TRBV4-1A0A0J9YWV2 RNU5F-3P-201ENST00000363767 117 ntBASIC1.81□□□□□ -2.12
TRBV4-1A0A0J9YWV2 RNU6-160P-201ENST00000384591 107 ntBASIC1.81□□□□□ -2.12
TRBV4-1A0A0J9YWV2 MIR17-201ENST00000385012 84 ntBASIC1.81□□□□□ -2.12
TRBV4-1A0A0J9YWV2 SUMO2P12-201ENST00000405924 140 ntBASIC1.81□□□□□ -2.12
TRBV4-1A0A0J9YWV2 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.81□□□□□ -2.12
TRBV4-1A0A0J9YWV2 BX510359.4-201ENST00000423750 193 ntBASIC1.81□□□□□ -2.12
TRBV4-1A0A0J9YWV2 HMGN2P38-201ENST00000423806 265 ntBASIC1.81□□□□□ -2.12
TRBV4-1A0A0J9YWV2 AL445305.1-201ENST00000432577 575 ntBASIC1.81□□□□□ -2.12
TRBV4-1A0A0J9YWV2 AC007395.1-201ENST00000451333 677 ntBASIC1.81□□□□□ -2.12
TRBV4-1A0A0J9YWV2 AP001486.1-201ENST00000463339 476 ntBASIC1.81□□□□□ -2.12
TRBV4-1A0A0J9YWV2 AC010531.2-201ENST00000465012 153 ntBASIC1.81□□□□□ -2.12
TRBV4-1A0A0J9YWV2 HMGN2P9-201ENST00000476875 229 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 175.6 ms