Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.2□□□□□ -2.06
IGHV4-28A0A0C4DH34 MIR3186-201ENST00000577404 85 ntBASIC2.2□□□□□ -2.06
IGHV4-28A0A0C4DH34 MIR4423-201ENST00000580922 80 ntBASIC2.2□□□□□ -2.06
IGHV4-28A0A0C4DH34 AL109918.3-201ENST00000603072 338 ntBASIC2.2□□□□□ -2.06
IGHV4-28A0A0C4DH34 AC011373.1-201ENST00000607270 237 ntBASIC2.2□□□□□ -2.06
IGHV4-28A0A0C4DH34 U1.23-201ENST00000610293 146 ntBASIC2.2□□□□□ -2.06
IGHV4-28A0A0C4DH34 RNU1-68P-201ENST00000615382 146 ntBASIC2.2□□□□□ -2.06
IGHV4-28A0A0C4DH34 U1.39-201ENST00000621562 146 ntBASIC2.2□□□□□ -2.06
IGHV4-28A0A0C4DH34 U6.104-201ENST00000637979 90 ntBASIC2.2□□□□□ -2.06
IGHV4-28A0A0C4DH34 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.2□□□□□ -2.06
IGHV4-28A0A0C4DH34 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.2□□□□□ -2.06
IGHV4-28A0A0C4DH34 AL365361.1-201ENST00000566942 3481 ntBASIC2.2□□□□□ -2.06
IGHV4-28A0A0C4DH34 Z82209.1-201ENST00000422141 2135 ntBASIC2.2□□□□□ -2.06
IGHV4-28A0A0C4DH34 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
IGHV4-28A0A0C4DH34 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
IGHV4-28A0A0C4DH34 MAPK10-266ENST00000641066 6555 ntBASIC2.19□□□□□ -2.06
IGHV4-28A0A0C4DH34 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.19□□□□□ -2.06
IGHV4-28A0A0C4DH34 Y_RNA.230-201ENST00000364348 109 ntBASIC2.19□□□□□ -2.06
IGHV4-28A0A0C4DH34 Y_RNA.286-201ENST00000364813 102 ntBASIC2.19□□□□□ -2.06
IGHV4-28A0A0C4DH34 Y_RNA.288-201ENST00000364854 92 ntBASIC2.19□□□□□ -2.06
IGHV4-28A0A0C4DH34 RNU6-1264P-201ENST00000383891 107 ntBASIC2.19□□□□□ -2.06
IGHV4-28A0A0C4DH34 RNU6-21P-201ENST00000384710 107 ntBASIC2.19□□□□□ -2.06
IGHV4-28A0A0C4DH34 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
IGHV4-28A0A0C4DH34 Y_RNA.581-201ENST00000391017 97 ntBASIC2.19□□□□□ -2.06
IGHV4-28A0A0C4DH34 RPL21P3-201ENST00000395517 478 ntBASIC2.19□□□□□ -2.06
IGHV4-28A0A0C4DH34 RNU6-1203P-201ENST00000410703 110 ntBASIC2.19□□□□□ -2.06
IGHV4-28A0A0C4DH34 AC096920.1-201ENST00000423991 241 ntBASIC2.19□□□□□ -2.06
IGHV4-28A0A0C4DH34 AC107222.1-201ENST00000510899 637 ntBASIC2.19□□□□□ -2.06
IGHV4-28A0A0C4DH34 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.19□□□□□ -2.06
IGHV4-28A0A0C4DH34 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.19□□□□□ -2.06
IGHV4-28A0A0C4DH34 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.19□□□□□ -2.06
IGHV4-28A0A0C4DH34 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.19□□□□□ -2.06
IGHV4-28A0A0C4DH34 AC091932.3-201ENST00000624223 323 ntBASIC2.19□□□□□ -2.06
IGHV4-28A0A0C4DH34 AC008873.1-201ENST00000625051 138 ntBASIC2.19□□□□□ -2.06
IGHV4-28A0A0C4DH34 MIR3674-201ENST00000636576 68 ntBASIC2.19□□□□□ -2.06
IGHV4-28A0A0C4DH34 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.19□□□□□ -2.06
IGHV4-28A0A0C4DH34 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
IGHV4-28A0A0C4DH34 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
IGHV4-28A0A0C4DH34 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.18□□□□□ -2.06
IGHV4-28A0A0C4DH34 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
IGHV4-28A0A0C4DH34 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.18□□□□□ -2.06
IGHV4-28A0A0C4DH34 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
IGHV4-28A0A0C4DH34 SNORA51.4-201ENST00000364993 124 ntBASIC2.18□□□□□ -2.06
IGHV4-28A0A0C4DH34 Y_RNA.541-201ENST00000384640 113 ntBASIC2.18□□□□□ -2.06
IGHV4-28A0A0C4DH34 MIR548B-201ENST00000385247 97 ntBASIC2.18□□□□□ -2.06
IGHV4-28A0A0C4DH34 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
IGHV4-28A0A0C4DH34 MIR1283-1-201ENST00000408494 87 ntBASIC2.18□□□□□ -2.06
IGHV4-28A0A0C4DH34 RNA5SP475-201ENST00000410568 110 ntBASIC2.18□□□□□ -2.06
IGHV4-28A0A0C4DH34 RNU2-38P-201ENST00000410856 79 ntBASIC2.18□□□□□ -2.06
IGHV4-28A0A0C4DH34 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.18□□□□□ -2.06
IGHV4-28A0A0C4DH34 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.18□□□□□ -2.06
IGHV4-28A0A0C4DH34 AC104389.3-201ENST00000445629 235 ntBASIC2.18□□□□□ -2.06
IGHV4-28A0A0C4DH34 RPL23AP3-201ENST00000453844 468 ntBASIC2.18□□□□□ -2.06
IGHV4-28A0A0C4DH34 HSPE1P25-201ENST00000455484 251 ntBASIC2.18□□□□□ -2.06
IGHV4-28A0A0C4DH34 S100A11P2-201ENST00000467589 312 ntBASIC2.18□□□□□ -2.06
IGHV4-28A0A0C4DH34 HMGN2P9-201ENST00000476875 229 ntBASIC2.18□□□□□ -2.06
IGHV4-28A0A0C4DH34 RNU6-496P-201ENST00000516145 99 ntBASIC2.18□□□□□ -2.06
IGHV4-28A0A0C4DH34 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.18□□□□□ -2.06
IGHV4-28A0A0C4DH34 AC062037.2-201ENST00000610137 73 ntBASIC2.18□□□□□ -2.06
IGHV4-28A0A0C4DH34 AC004467.1-201ENST00000615678 330 ntBASIC2.18□□□□□ -2.06
IGHV4-28A0A0C4DH34 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.18□□□□□ -2.06
IGHV4-28A0A0C4DH34 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
IGHV4-28A0A0C4DH34 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
IGHV4-28A0A0C4DH34 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
IGHV4-28A0A0C4DH34 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.18□□□□□ -2.06
IGHV4-28A0A0C4DH34 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.18□□□□□ -2.06
IGHV4-28A0A0C4DH34 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
IGHV4-28A0A0C4DH34 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.18□□□□□ -2.06
IGHV4-28A0A0C4DH34 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
IGHV4-28A0A0C4DH34 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
IGHV4-28A0A0C4DH34 AC135776.4-201ENST00000624300 1904 ntBASIC2.17□□□□□ -2.06
IGHV4-28A0A0C4DH34 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.17□□□□□ -2.06
IGHV4-28A0A0C4DH34 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.17□□□□□ -2.06
IGHV4-28A0A0C4DH34 Y_RNA.16-201ENST00000362421 102 ntBASIC2.17□□□□□ -2.06
IGHV4-28A0A0C4DH34 Y_RNA.101-201ENST00000363154 102 ntBASIC2.17□□□□□ -2.06
IGHV4-28A0A0C4DH34 Y_RNA.331-201ENST00000365267 102 ntBASIC2.17□□□□□ -2.06
IGHV4-28A0A0C4DH34 RNU6-1310P-201ENST00000384153 107 ntBASIC2.17□□□□□ -2.06
IGHV4-28A0A0C4DH34 MIR586-201ENST00000385035 97 ntBASIC2.17□□□□□ -2.06
IGHV4-28A0A0C4DH34 RPS29P26-201ENST00000477483 171 ntBASIC2.17□□□□□ -2.06
IGHV4-28A0A0C4DH34 SEPT14P8-201ENST00000508026 178 ntBASIC2.17□□□□□ -2.06
IGHV4-28A0A0C4DH34 RNU6-966P-201ENST00000516479 104 ntBASIC2.17□□□□□ -2.06
IGHV4-28A0A0C4DH34 RNA5SP490-201ENST00000517141 136 ntBASIC2.17□□□□□ -2.06
IGHV4-28A0A0C4DH34 RN7SKP40-201ENST00000517211 242 ntBASIC2.17□□□□□ -2.06
IGHV4-28A0A0C4DH34 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.17□□□□□ -2.06
IGHV4-28A0A0C4DH34 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.17□□□□□ -2.06
IGHV4-28A0A0C4DH34 MIR4753-201ENST00000585119 83 ntBASIC2.17□□□□□ -2.06
IGHV4-28A0A0C4DH34 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.17□□□□□ -2.06
IGHV4-28A0A0C4DH34 AC006006.1-201ENST00000603082 144 ntBASIC2.17□□□□□ -2.06
IGHV4-28A0A0C4DH34 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.17□□□□□ -2.06
IGHV4-28A0A0C4DH34 SNORD113-5-201ENST00000607261 78 ntBASIC2.17□□□□□ -2.06
IGHV4-28A0A0C4DH34 AC093732.2-201ENST00000607950 274 ntBASIC2.17□□□□□ -2.06
IGHV4-28A0A0C4DH34 AP001282.2-201ENST00000616149 309 ntBASIC2.17□□□□□ -2.06
IGHV4-28A0A0C4DH34 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.17□□□□□ -2.06
IGHV4-28A0A0C4DH34 AC010615.1-201ENST00000594254 1764 ntBASIC2.17□□□□□ -2.06
IGHV4-28A0A0C4DH34 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
IGHV4-28A0A0C4DH34 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
IGHV4-28A0A0C4DH34 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.17□□□□□ -2.06
IGHV4-28A0A0C4DH34 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
IGHV4-28A0A0C4DH34 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.16□□□□□ -2.06
IGHV4-28A0A0C4DH34 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms