Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 RNU6-1132P-201ENST00000459214 107 ntBASIC0.15□□□□□ -2.39
TRAV4A0A0B4J268 RNU7-57P-201ENST00000459540 60 ntBASIC0.15□□□□□ -2.39
TRAV4A0A0B4J268 RNU6-1110P-201ENST00000516462 101 ntBASIC0.15□□□□□ -2.39
TRAV4A0A0B4J268 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC0.15□□□□□ -2.39
TRAV4A0A0B4J268 AP003181.2-201ENST00000528941 181 ntBASIC0.15□□□□□ -2.39
TRAV4A0A0B4J268 AC016957.1-201ENST00000534895 309 ntBASIC0.15□□□□□ -2.39
TRAV4A0A0B4J268 SNORA28-201ENST00000606769 126 ntBASIC0.15□□□□□ -2.39
TRAV4A0A0B4J268 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.15□□□□□ -2.39
TRAV4A0A0B4J268 AP000568.1-201ENST00000282964 442 ntBASIC0.14□□□□□ -2.39
TRAV4A0A0B4J268 RNY1P12-201ENST00000364251 105 ntBASIC0.14□□□□□ -2.39
TRAV4A0A0B4J268 RNU6-1305P-201ENST00000364353 104 ntBASIC0.14□□□□□ -2.39
TRAV4A0A0B4J268 RNU6-1303P-201ENST00000364841 107 ntBASIC0.14□□□□□ -2.39
TRAV4A0A0B4J268 RNU6-1240P-201ENST00000365155 104 ntBASIC0.14□□□□□ -2.39
TRAV4A0A0B4J268 RNU6-715P-201ENST00000365204 103 ntBASIC0.14□□□□□ -2.39
TRAV4A0A0B4J268 RNU6-827P-201ENST00000365553 106 ntBASIC0.14□□□□□ -2.39
TRAV4A0A0B4J268 SNORA36.2-201ENST00000384004 127 ntBASIC0.14□□□□□ -2.39
TRAV4A0A0B4J268 RNU6-793P-201ENST00000384233 104 ntBASIC0.14□□□□□ -2.39
TRAV4A0A0B4J268 MIR586-201ENST00000385035 97 ntBASIC0.14□□□□□ -2.39
TRAV4A0A0B4J268 RNA5SP193-201ENST00000410353 107 ntBASIC0.14□□□□□ -2.39
TRAV4A0A0B4J268 RNA5SP504-201ENST00000410676 117 ntBASIC0.14□□□□□ -2.39
TRAV4A0A0B4J268 RNA5SP222-201ENST00000411039 105 ntBASIC0.14□□□□□ -2.39
TRAV4A0A0B4J268 MTCO2P21-201ENST00000419780 677 ntBASIC0.14□□□□□ -2.39
TRAV4A0A0B4J268 AL354692.1-201ENST00000423044 315 ntBASIC0.14□□□□□ -2.39
TRAV4A0A0B4J268 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC0.14□□□□□ -2.39
TRAV4A0A0B4J268 AL445305.1-201ENST00000432577 575 ntBASIC0.14□□□□□ -2.39
TRAV4A0A0B4J268 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.14□□□□□ -2.39
TRAV4A0A0B4J268 MTCO2P7-201ENST00000446518 666 ntBASIC0.14□□□□□ -2.39
TRAV4A0A0B4J268 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.14□□□□□ -2.39
TRAV4A0A0B4J268 AC079140.5-201ENST00000507882 310 ntBASIC0.14□□□□□ -2.39
TRAV4A0A0B4J268 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.14□□□□□ -2.39
TRAV4A0A0B4J268 SNORA68.3-201ENST00000515906 83 ntBASIC0.14□□□□□ -2.39
TRAV4A0A0B4J268 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC0.14□□□□□ -2.39
TRAV4A0A0B4J268 AC011195.1-201ENST00000578177 177 ntBASIC0.14□□□□□ -2.39
TRAV4A0A0B4J268 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.14□□□□□ -2.39
TRAV4A0A0B4J268 AL391903.3-201ENST00000612158 163 ntBASIC0.14□□□□□ -2.39
TRAV4A0A0B4J268 AL136317.1-201ENST00000612653 226 ntBASIC0.14□□□□□ -2.39
TRAV4A0A0B4J268 AC138649.3-201ENST00000622154 254 ntBASIC0.14□□□□□ -2.39
TRAV4A0A0B4J268 U6.114-201ENST00000636407 96 ntBASIC0.14□□□□□ -2.39
TRAV4A0A0B4J268 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.14□□□□□ -2.39
TRAV4A0A0B4J268 MIRLET7D-201ENST00000362263 87 ntBASIC0.13□□□□□ -2.39
TRAV4A0A0B4J268 RNU6-349P-201ENST00000362402 107 ntBASIC0.13□□□□□ -2.39
TRAV4A0A0B4J268 RNU5E-10P-201ENST00000363506 118 ntBASIC0.13□□□□□ -2.39
TRAV4A0A0B4J268 RNU6-42P-201ENST00000384165 107 ntBASIC0.13□□□□□ -2.39
TRAV4A0A0B4J268 Y_RNA.480-201ENST00000384364 102 ntBASIC0.13□□□□□ -2.39
TRAV4A0A0B4J268 MIR216A-201ENST00000385063 110 ntBASIC0.13□□□□□ -2.39
TRAV4A0A0B4J268 RNU1-139P-201ENST00000391307 165 ntBASIC0.13□□□□□ -2.39
TRAV4A0A0B4J268 AC244098.3-201ENST00000424803 96 ntBASIC0.13□□□□□ -2.39
TRAV4A0A0B4J268 MTATP6P16-201ENST00000434543 526 ntBASIC0.13□□□□□ -2.39
TRAV4A0A0B4J268 DAP3P1-201ENST00000441522 278 ntBASIC0.13□□□□□ -2.39
TRAV4A0A0B4J268 AC009237.7-201ENST00000447357 229 ntBASIC0.13□□□□□ -2.39
TRAV4A0A0B4J268 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC0.13□□□□□ -2.39
TRAV4A0A0B4J268 RNU7-94P-201ENST00000459576 63 ntBASIC0.13□□□□□ -2.39
TRAV4A0A0B4J268 AC025647.1-201ENST00000517879 253 ntBASIC0.13□□□□□ -2.39
TRAV4A0A0B4J268 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.13□□□□□ -2.39
TRAV4A0A0B4J268 AL121992.2-201ENST00000606262 256 ntBASIC0.13□□□□□ -2.39
TRAV4A0A0B4J268 AC004832.4-201ENST00000608952 331 ntBASIC0.13□□□□□ -2.39
TRAV4A0A0B4J268 AC017083.3-201ENST00000609955 700 ntBASIC0.13□□□□□ -2.39
TRAV4A0A0B4J268 AC068792.1-201ENST00000621354 417 ntBASIC0.13□□□□□ -2.39
TRAV4A0A0B4J268 MTND5P16-201ENST00000460269 1703 ntBASIC0.13□□□□□ -2.39
TRAV4A0A0B4J268 Y_RNA.18-201ENST00000362461 102 ntBASIC0.12□□□□□ -2.39
TRAV4A0A0B4J268 RNU6-1287P-201ENST00000362914 107 ntBASIC0.12□□□□□ -2.39
TRAV4A0A0B4J268 Y_RNA.330-201ENST00000365230 109 ntBASIC0.12□□□□□ -2.39
TRAV4A0A0B4J268 RNU6-1327P-201ENST00000365302 105 ntBASIC0.12□□□□□ -2.39
TRAV4A0A0B4J268 RNY1P14-201ENST00000384426 108 ntBASIC0.12□□□□□ -2.39
TRAV4A0A0B4J268 RNU6-1060P-201ENST00000384664 107 ntBASIC0.12□□□□□ -2.39
TRAV4A0A0B4J268 RNU6-550P-201ENST00000391057 101 ntBASIC0.12□□□□□ -2.39
TRAV4A0A0B4J268 RNU6-1000P-201ENST00000391066 106 ntBASIC0.12□□□□□ -2.39
TRAV4A0A0B4J268 MIR1287-201ENST00000408492 90 ntBASIC0.12□□□□□ -2.39
TRAV4A0A0B4J268 RNU6-1186P-201ENST00000410429 97 ntBASIC0.12□□□□□ -2.39
TRAV4A0A0B4J268 RPS3AP3-201ENST00000411933 242 ntBASIC0.12□□□□□ -2.39
TRAV4A0A0B4J268 AC016909.1-201ENST00000415916 166 ntBASIC0.12□□□□□ -2.39
TRAV4A0A0B4J268 AC106883.1-201ENST00000418805 562 ntBASIC0.12□□□□□ -2.39
TRAV4A0A0B4J268 MTCO2P23-201ENST00000425216 680 ntBASIC0.12□□□□□ -2.39
TRAV4A0A0B4J268 RPS20P10-201ENST00000451209 253 ntBASIC0.12□□□□□ -2.39
TRAV4A0A0B4J268 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC0.12□□□□□ -2.39
TRAV4A0A0B4J268 AC131055.1-201ENST00000584626 316 ntBASIC0.12□□□□□ -2.39
TRAV4A0A0B4J268 AC234772.3-201ENST00000602277 528 ntBASIC0.12□□□□□ -2.39
TRAV4A0A0B4J268 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.12□□□□□ -2.39
TRAV4A0A0B4J268 AC022709.1-201ENST00000615967 87 ntBASIC0.12□□□□□ -2.39
TRAV4A0A0B4J268 snoZ196.1-201ENST00000625269 89 ntBASIC0.12□□□□□ -2.39
TRAV4A0A0B4J268 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.12□□□□□ -2.39
TRAV4A0A0B4J268 MTND5P17-201ENST00000418405 1603 ntBASIC0.12□□□□□ -2.39
TRAV4A0A0B4J268 Y_RNA.116-201ENST00000363292 103 ntBASIC0.11□□□□□ -2.39
TRAV4A0A0B4J268 Y_RNA.226-201ENST00000364337 114 ntBASIC0.11□□□□□ -2.39
TRAV4A0A0B4J268 Y_RNA.354-201ENST00000365448 111 ntBASIC0.11□□□□□ -2.39
TRAV4A0A0B4J268 RNU6-342P-201ENST00000384521 104 ntBASIC0.11□□□□□ -2.39
TRAV4A0A0B4J268 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.11□□□□□ -2.39
TRAV4A0A0B4J268 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.11□□□□□ -2.39
TRAV4A0A0B4J268 AL162725.1-201ENST00000435405 301 ntBASIC0.11□□□□□ -2.39
TRAV4A0A0B4J268 snoU13.6-201ENST00000458785 104 ntBASIC0.11□□□□□ -2.39
TRAV4A0A0B4J268 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.11□□□□□ -2.39
TRAV4A0A0B4J268 OR9P1P-201ENST00000496431 281 ntBASIC0.11□□□□□ -2.39
TRAV4A0A0B4J268 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.11□□□□□ -2.39
TRAV4A0A0B4J268 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.11□□□□□ -2.39
TRAV4A0A0B4J268 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.11□□□□□ -2.39
TRAV4A0A0B4J268 AC022868.1-201ENST00000517767 391 ntBASIC0.11□□□□□ -2.39
TRAV4A0A0B4J268 AP003168.1-201ENST00000530091 307 ntBASIC0.11□□□□□ -2.39
TRAV4A0A0B4J268 AC109810.1-201ENST00000534066 224 ntBASIC0.11□□□□□ -2.39
TRAV4A0A0B4J268 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.11□□□□□ -2.39
TRAV4A0A0B4J268 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC0.11□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms