Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 MIR549A-201ENST00000385268 96 ntBASIC0.56□□□□□ -2.32
HDGFL3Q9Y3E1 SNORD70.1-201ENST00000391007 85 ntBASIC0.56□□□□□ -2.32
HDGFL3Q9Y3E1 AF228730.1-201ENST00000397972 663 ntBASIC0.56□□□□□ -2.32
HDGFL3Q9Y3E1 MIR548J-201ENST00000408833 112 ntBASIC0.56□□□□□ -2.32
HDGFL3Q9Y3E1 Y_RNA.598-201ENST00000410480 95 ntBASIC0.56□□□□□ -2.32
HDGFL3Q9Y3E1 MTCO2P8-201ENST00000412213 658 ntBASIC0.56□□□□□ -2.32
HDGFL3Q9Y3E1 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.56□□□□□ -2.32
HDGFL3Q9Y3E1 GPR143P-201ENST00000434155 205 ntBASIC0.56□□□□□ -2.32
HDGFL3Q9Y3E1 AC004854.1-201ENST00000440356 349 ntBASIC0.56□□□□□ -2.32
HDGFL3Q9Y3E1 NFU1P2-201ENST00000448700 469 ntBASIC0.56□□□□□ -2.32
HDGFL3Q9Y3E1 AC090142.3-201ENST00000519012 385 ntBASIC0.56□□□□□ -2.32
HDGFL3Q9Y3E1 DEFB108E-201ENST00000524692 240 ntBASIC0.56□□□□□ -2.32
HDGFL3Q9Y3E1 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.56□□□□□ -2.32
HDGFL3Q9Y3E1 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.56□□□□□ -2.32
HDGFL3Q9Y3E1 AGGF1P4-201ENST00000568249 801 ntBASIC0.56□□□□□ -2.32
HDGFL3Q9Y3E1 AL391840.1-201ENST00000571144 367 ntBASIC0.56□□□□□ -2.32
HDGFL3Q9Y3E1 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC0.56□□□□□ -2.32
HDGFL3Q9Y3E1 RSL24D1P11-201ENST00000591045 491 ntBASIC0.56□□□□□ -2.32
HDGFL3Q9Y3E1 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.56□□□□□ -2.32
HDGFL3Q9Y3E1 AC022217.4-201ENST00000604389 163 ntBASIC0.56□□□□□ -2.32
HDGFL3Q9Y3E1 TUSC7.1-201ENST00000610969 165 ntBASIC0.56□□□□□ -2.32
HDGFL3Q9Y3E1 GHRLOS.1-201ENST00000610995 70 ntBASIC0.56□□□□□ -2.32
HDGFL3Q9Y3E1 TCL6_2.1-201ENST00000615162 119 ntBASIC0.56□□□□□ -2.32
HDGFL3Q9Y3E1 uc_338.11-201ENST00000619132 160 ntBASIC0.56□□□□□ -2.32
HDGFL3Q9Y3E1 U6.108-201ENST00000637764 58 ntBASIC0.56□□□□□ -2.32
HDGFL3Q9Y3E1 RNU6-266P-201ENST00000364225 107 ntBASIC0.55□□□□□ -2.32
HDGFL3Q9Y3E1 RNU6-1127P-201ENST00000384580 107 ntBASIC0.55□□□□□ -2.32
HDGFL3Q9Y3E1 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.55□□□□□ -2.32
HDGFL3Q9Y3E1 RN7SKP200-201ENST00000410564 320 ntBASIC0.55□□□□□ -2.32
HDGFL3Q9Y3E1 SSR1P2-201ENST00000415208 787 ntBASIC0.55□□□□□ -2.32
HDGFL3Q9Y3E1 TIMM9P3-201ENST00000428659 274 ntBASIC0.55□□□□□ -2.32
HDGFL3Q9Y3E1 AC004386.2-201ENST00000441858 148 ntBASIC0.55□□□□□ -2.32
HDGFL3Q9Y3E1 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.55□□□□□ -2.32
HDGFL3Q9Y3E1 AC105758.1-201ENST00000506038 399 ntBASIC0.55□□□□□ -2.32
HDGFL3Q9Y3E1 RNU6-1069P-201ENST00000516612 133 ntBASIC0.55□□□□□ -2.32
HDGFL3Q9Y3E1 RNU6-922P-201ENST00000516753 99 ntBASIC0.55□□□□□ -2.32
HDGFL3Q9Y3E1 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
HDGFL3Q9Y3E1 AC004812.1-201ENST00000540773 146 ntBASIC0.55□□□□□ -2.32
HDGFL3Q9Y3E1 AC025423.5-201ENST00000550230 219 ntBASIC0.55□□□□□ -2.32
HDGFL3Q9Y3E1 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC0.55□□□□□ -2.32
HDGFL3Q9Y3E1 Z99497.2-201ENST00000603634 310 ntBASIC0.55□□□□□ -2.32
HDGFL3Q9Y3E1 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.55□□□□□ -2.32
HDGFL3Q9Y3E1 AL513423.1-201ENST00000621695 132 ntBASIC0.55□□□□□ -2.32
HDGFL3Q9Y3E1 AC006001.4-201ENST00000622243 395 ntBASIC0.55□□□□□ -2.32
HDGFL3Q9Y3E1 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.55□□□□□ -2.32
HDGFL3Q9Y3E1 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.54□□□□□ -2.32
HDGFL3Q9Y3E1 RNU6-1097P-201ENST00000363586 107 ntBASIC0.54□□□□□ -2.32
HDGFL3Q9Y3E1 Y_RNA.224-201ENST00000364308 111 ntBASIC0.54□□□□□ -2.32
HDGFL3Q9Y3E1 RNU6-108P-201ENST00000365558 107 ntBASIC0.54□□□□□ -2.32
HDGFL3Q9Y3E1 RNU6-969P-201ENST00000383900 105 ntBASIC0.54□□□□□ -2.32
HDGFL3Q9Y3E1 SNORA12.1-201ENST00000390873 148 ntBASIC0.54□□□□□ -2.32
HDGFL3Q9Y3E1 RNA5SP323-201ENST00000391094 133 ntBASIC0.54□□□□□ -2.32
HDGFL3Q9Y3E1 RPS3AP1-201ENST00000413190 320 ntBASIC0.54□□□□□ -2.32
HDGFL3Q9Y3E1 RPS26P42-201ENST00000413485 326 ntBASIC0.54□□□□□ -2.32
HDGFL3Q9Y3E1 AC106883.1-201ENST00000418805 562 ntBASIC0.54□□□□□ -2.32
HDGFL3Q9Y3E1 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.54□□□□□ -2.32
HDGFL3Q9Y3E1 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC0.54□□□□□ -2.32
HDGFL3Q9Y3E1 MTCO3P18-201ENST00000440206 761 ntBASIC0.54□□□□□ -2.32
HDGFL3Q9Y3E1 UBE2D3P4-201ENST00000441973 436 ntBASIC0.54□□□□□ -2.32
HDGFL3Q9Y3E1 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.54□□□□□ -2.32
HDGFL3Q9Y3E1 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.54□□□□□ -2.32
HDGFL3Q9Y3E1 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.54□□□□□ -2.32
HDGFL3Q9Y3E1 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.54□□□□□ -2.32
HDGFL3Q9Y3E1 snoU13.6-201ENST00000458785 104 ntBASIC0.54□□□□□ -2.32
HDGFL3Q9Y3E1 RNU6-322P-201ENST00000516010 103 ntBASIC0.54□□□□□ -2.32
HDGFL3Q9Y3E1 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC0.54□□□□□ -2.32
HDGFL3Q9Y3E1 MTND1P8-201ENST00000571424 950 ntBASIC0.54□□□□□ -2.32
HDGFL3Q9Y3E1 MIR4703-201ENST00000577728 79 ntBASIC0.54□□□□□ -2.32
HDGFL3Q9Y3E1 MIR5006-201ENST00000583027 110 ntBASIC0.54□□□□□ -2.32
HDGFL3Q9Y3E1 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.54□□□□□ -2.32
HDGFL3Q9Y3E1 AP000240.1-201ENST00000609910 452 ntBASIC0.54□□□□□ -2.32
HDGFL3Q9Y3E1 MIR8054-201ENST00000620877 86 ntBASIC0.54□□□□□ -2.32
HDGFL3Q9Y3E1 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.54□□□□□ -2.32
HDGFL3Q9Y3E1 AC027514.1-201ENST00000588561 1603 ntBASIC0.53□□□□□ -2.32
HDGFL3Q9Y3E1 RNU5F-7P-201ENST00000363696 115 ntBASIC0.53□□□□□ -2.32
HDGFL3Q9Y3E1 Y_RNA.399-201ENST00000383955 105 ntBASIC0.53□□□□□ -2.32
HDGFL3Q9Y3E1 SNORA80D-201ENST00000384488 135 ntBASIC0.53□□□□□ -2.32
HDGFL3Q9Y3E1 MIR653-201ENST00000385279 96 ntBASIC0.53□□□□□ -2.32
HDGFL3Q9Y3E1 RNU6-733P-201ENST00000410759 104 ntBASIC0.53□□□□□ -2.32
HDGFL3Q9Y3E1 AC016909.1-201ENST00000415916 166 ntBASIC0.53□□□□□ -2.32
HDGFL3Q9Y3E1 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC0.53□□□□□ -2.32
HDGFL3Q9Y3E1 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC0.53□□□□□ -2.32
HDGFL3Q9Y3E1 AC009237.7-201ENST00000447357 229 ntBASIC0.53□□□□□ -2.32
HDGFL3Q9Y3E1 ZNF114P1-201ENST00000453500 292 ntBASIC0.53□□□□□ -2.32
HDGFL3Q9Y3E1 SNRPGP9-201ENST00000456025 225 ntBASIC0.53□□□□□ -2.32
HDGFL3Q9Y3E1 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC0.53□□□□□ -2.32
HDGFL3Q9Y3E1 GMFBP1-201ENST00000467831 427 ntBASIC0.53□□□□□ -2.32
HDGFL3Q9Y3E1 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.53□□□□□ -2.32
HDGFL3Q9Y3E1 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.53□□□□□ -2.32
HDGFL3Q9Y3E1 RPS26P48-201ENST00000491713 339 ntBASIC0.53□□□□□ -2.32
HDGFL3Q9Y3E1 AC069113.1-201ENST00000517763 267 ntBASIC0.53□□□□□ -2.32
HDGFL3Q9Y3E1 ELOCP32-201ENST00000548625 324 ntBASIC0.53□□□□□ -2.32
HDGFL3Q9Y3E1 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.53□□□□□ -2.32
HDGFL3Q9Y3E1 MIR3941-201ENST00000582572 103 ntBASIC0.53□□□□□ -2.32
HDGFL3Q9Y3E1 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC0.53□□□□□ -2.32
HDGFL3Q9Y3E1 AP000720.1-201ENST00000625091 483 ntBASIC0.53□□□□□ -2.32
HDGFL3Q9Y3E1 SNORD3E-202ENST00000627253 216 ntBASIC0.53□□□□□ -2.32
HDGFL3Q9Y3E1 RNA5SP361-201ENST00000362686 118 ntBASIC0.52□□□□□ -2.33
HDGFL3Q9Y3E1 Y_RNA.226-201ENST00000364337 114 ntBASIC0.52□□□□□ -2.33
HDGFL3Q9Y3E1 Y_RNA.238-201ENST00000364441 102 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms