Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
ZC3H4Q9UPT8 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
ZC3H4Q9UPT8 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.53□□□□□ -1.68
ZC3H4Q9UPT8 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
ZC3H4Q9UPT8 SNORD114-19-201ENST00000363072 75 ntBASIC4.52□□□□□ -1.69
ZC3H4Q9UPT8 RNA5SP322-201ENST00000363617 119 ntBASIC4.52□□□□□ -1.69
ZC3H4Q9UPT8 Y_RNA.456-201ENST00000384232 111 ntBASIC4.52□□□□□ -1.69
ZC3H4Q9UPT8 AL159169.1-201ENST00000421119 127 ntBASIC4.52□□□□□ -1.69
ZC3H4Q9UPT8 RPL23AP58-201ENST00000440453 469 ntBASIC4.52□□□□□ -1.69
ZC3H4Q9UPT8 EEF1B2P7-201ENST00000451177 676 ntBASIC4.52□□□□□ -1.69
ZC3H4Q9UPT8 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC4.52□□□□□ -1.69
ZC3H4Q9UPT8 RNU4-57P-201ENST00000515980 135 ntBASIC4.52□□□□□ -1.69
ZC3H4Q9UPT8 RNU2-44P-201ENST00000516795 194 ntBASIC4.52□□□□□ -1.69
ZC3H4Q9UPT8 HSPE1P18-201ENST00000517602 280 ntBASIC4.52□□□□□ -1.69
ZC3H4Q9UPT8 AC091152.3-201ENST00000604227 325 ntBASIC4.52□□□□□ -1.69
ZC3H4Q9UPT8 AL391903.3-201ENST00000612158 163 ntBASIC4.52□□□□□ -1.69
ZC3H4Q9UPT8 MIR7112-201ENST00000616126 65 ntBASIC4.52□□□□□ -1.69
ZC3H4Q9UPT8 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.52□□□□□ -1.69
ZC3H4Q9UPT8 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
ZC3H4Q9UPT8 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
ZC3H4Q9UPT8 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.52□□□□□ -1.69
ZC3H4Q9UPT8 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
ZC3H4Q9UPT8 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.52□□□□□ -1.69
ZC3H4Q9UPT8 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
ZC3H4Q9UPT8 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
ZC3H4Q9UPT8 AC007656.2-201ENST00000624902 4547 ntBASIC4.51□□□□□ -1.69
ZC3H4Q9UPT8 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
ZC3H4Q9UPT8 RNU4-15P-201ENST00000362613 141 ntBASIC4.51□□□□□ -1.69
ZC3H4Q9UPT8 Y_RNA.243-201ENST00000364481 109 ntBASIC4.51□□□□□ -1.69
ZC3H4Q9UPT8 MIR526A2-201ENST00000390198 65 ntBASIC4.51□□□□□ -1.69
ZC3H4Q9UPT8 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
ZC3H4Q9UPT8 AL606845.1-201ENST00000404881 255 ntBASIC4.51□□□□□ -1.69
ZC3H4Q9UPT8 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.51□□□□□ -1.69
ZC3H4Q9UPT8 HSPE1P21-201ENST00000438283 308 ntBASIC4.51□□□□□ -1.69
ZC3H4Q9UPT8 Z75741.1-201ENST00000446793 314 ntBASIC4.51□□□□□ -1.69
ZC3H4Q9UPT8 RNU2-56P-201ENST00000516826 190 ntBASIC4.51□□□□□ -1.69
ZC3H4Q9UPT8 MIR4724-201ENST00000579485 89 ntBASIC4.51□□□□□ -1.69
ZC3H4Q9UPT8 MIR6844-201ENST00000637122 62 ntBASIC4.51□□□□□ -1.69
ZC3H4Q9UPT8 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
ZC3H4Q9UPT8 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.51□□□□□ -1.69
ZC3H4Q9UPT8 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
ZC3H4Q9UPT8 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
ZC3H4Q9UPT8 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.51□□□□□ -1.69
ZC3H4Q9UPT8 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
ZC3H4Q9UPT8 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
ZC3H4Q9UPT8 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.5□□□□□ -1.69
ZC3H4Q9UPT8 ZNF702P-202ENST00000434269 1966 ntBASIC4.5□□□□□ -1.69
ZC3H4Q9UPT8 Y_RNA.229-201ENST00000364347 113 ntBASIC4.5□□□□□ -1.69
ZC3H4Q9UPT8 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.5□□□□□ -1.69
ZC3H4Q9UPT8 RNU6-1056P-201ENST00000383996 107 ntBASIC4.5□□□□□ -1.69
ZC3H4Q9UPT8 RNU7-170P-201ENST00000459303 61 ntBASIC4.5□□□□□ -1.69
ZC3H4Q9UPT8 AC025518.1-201ENST00000479856 347 ntBASIC4.5□□□□□ -1.69
ZC3H4Q9UPT8 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC4.5□□□□□ -1.69
ZC3H4Q9UPT8 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC4.5□□□□□ -1.69
ZC3H4Q9UPT8 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC4.5□□□□□ -1.69
ZC3H4Q9UPT8 U6.115-201ENST00000636045 103 ntBASIC4.5□□□□□ -1.69
ZC3H4Q9UPT8 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC4.5□□□□□ -1.69
ZC3H4Q9UPT8 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
ZC3H4Q9UPT8 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
ZC3H4Q9UPT8 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC4.5□□□□□ -1.69
ZC3H4Q9UPT8 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
ZC3H4Q9UPT8 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.5□□□□□ -1.69
ZC3H4Q9UPT8 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC4.5□□□□□ -1.69
ZC3H4Q9UPT8 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
ZC3H4Q9UPT8 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
ZC3H4Q9UPT8 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
ZC3H4Q9UPT8 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
ZC3H4Q9UPT8 RNU1-75P-201ENST00000347264 129 ntBASIC4.49□□□□□ -1.69
ZC3H4Q9UPT8 RNU6-1180P-201ENST00000364935 107 ntBASIC4.49□□□□□ -1.69
ZC3H4Q9UPT8 Y_RNA.310-201ENST00000365063 113 ntBASIC4.49□□□□□ -1.69
ZC3H4Q9UPT8 RNU6-728P-201ENST00000365375 104 ntBASIC4.49□□□□□ -1.69
ZC3H4Q9UPT8 AL139281.1-201ENST00000422120 335 ntBASIC4.49□□□□□ -1.69
ZC3H4Q9UPT8 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC4.49□□□□□ -1.69
ZC3H4Q9UPT8 S100A11P2-201ENST00000467589 312 ntBASIC4.49□□□□□ -1.69
ZC3H4Q9UPT8 RPL27AP5-201ENST00000469428 449 ntBASIC4.49□□□□□ -1.69
ZC3H4Q9UPT8 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.49□□□□□ -1.69
ZC3H4Q9UPT8 SNORA62.6-201ENST00000606322 83 ntBASIC4.49□□□□□ -1.69
ZC3H4Q9UPT8 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
ZC3H4Q9UPT8 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
ZC3H4Q9UPT8 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
ZC3H4Q9UPT8 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
ZC3H4Q9UPT8 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
ZC3H4Q9UPT8 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
ZC3H4Q9UPT8 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
ZC3H4Q9UPT8 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
ZC3H4Q9UPT8 AC023141.4-201ENST00000412031 328 ntBASIC4.48□□□□□ -1.69
ZC3H4Q9UPT8 AC091179.1-201ENST00000461606 579 ntBASIC4.48□□□□□ -1.69
ZC3H4Q9UPT8 SRIP1-201ENST00000489235 288 ntBASIC4.48□□□□□ -1.69
ZC3H4Q9UPT8 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC4.48□□□□□ -1.69
ZC3H4Q9UPT8 SNORA70.12-201ENST00000516084 153 ntBASIC4.48□□□□□ -1.69
ZC3H4Q9UPT8 RNU6-561P-201ENST00000516222 102 ntBASIC4.48□□□□□ -1.69
ZC3H4Q9UPT8 SNORD19.2-201ENST00000516978 73 ntBASIC4.48□□□□□ -1.69
ZC3H4Q9UPT8 AP001328.1-201ENST00000528550 176 ntBASIC4.48□□□□□ -1.69
ZC3H4Q9UPT8 MIR5004-201ENST00000579078 107 ntBASIC4.48□□□□□ -1.69
ZC3H4Q9UPT8 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC4.48□□□□□ -1.69
ZC3H4Q9UPT8 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.48□□□□□ -1.69
ZC3H4Q9UPT8 HSPE1P7-201ENST00000604681 321 ntBASIC4.48□□□□□ -1.69
ZC3H4Q9UPT8 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.48□□□□□ -1.69
ZC3H4Q9UPT8 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.48□□□□□ -1.69
ZC3H4Q9UPT8 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms