Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 MIR190B-201ENST00000401119 79 ntBASIC3.4□□□□□ -1.87
USP35Q9P2H5 DPH3P2-201ENST00000422618 250 ntBASIC3.4□□□□□ -1.87
USP35Q9P2H5 AC004386.2-201ENST00000441858 148 ntBASIC3.4□□□□□ -1.87
USP35Q9P2H5 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.4□□□□□ -1.87
USP35Q9P2H5 HMGN2P18-201ENST00000450680 270 ntBASIC3.4□□□□□ -1.87
USP35Q9P2H5 MTCO3P10-201ENST00000455912 772 ntBASIC3.4□□□□□ -1.87
USP35Q9P2H5 AC093259.1-201ENST00000509755 300 ntBASIC3.4□□□□□ -1.87
USP35Q9P2H5 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC3.4□□□□□ -1.87
USP35Q9P2H5 MIR4795-201ENST00000584182 89 ntBASIC3.4□□□□□ -1.87
USP35Q9P2H5 AL049779.4-201ENST00000604500 156 ntBASIC3.4□□□□□ -1.87
USP35Q9P2H5 AL355802.3-201ENST00000607571 545 ntBASIC3.4□□□□□ -1.87
USP35Q9P2H5 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.4□□□□□ -1.87
USP35Q9P2H5 AC126177.8-201ENST00000618339 1015 ntBASIC3.4□□□□□ -1.87
USP35Q9P2H5 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
USP35Q9P2H5 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.39□□□□□ -1.87
USP35Q9P2H5 RNU4-79P-201ENST00000362764 141 ntBASIC3.39□□□□□ -1.87
USP35Q9P2H5 RNU6-743P-201ENST00000364151 106 ntBASIC3.39□□□□□ -1.87
USP35Q9P2H5 SNORA67.1-201ENST00000364749 141 ntBASIC3.39□□□□□ -1.87
USP35Q9P2H5 Y_RNA.332-201ENST00000365271 113 ntBASIC3.39□□□□□ -1.87
USP35Q9P2H5 Y_RNA.577-201ENST00000384794 101 ntBASIC3.39□□□□□ -1.87
USP35Q9P2H5 RNU1-139P-201ENST00000391307 165 ntBASIC3.39□□□□□ -1.87
USP35Q9P2H5 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.39□□□□□ -1.87
USP35Q9P2H5 RNU7-14P-201ENST00000459331 62 ntBASIC3.39□□□□□ -1.87
USP35Q9P2H5 TOMM22P6-201ENST00000465035 409 ntBASIC3.39□□□□□ -1.87
USP35Q9P2H5 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.39□□□□□ -1.87
USP35Q9P2H5 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC3.39□□□□□ -1.87
USP35Q9P2H5 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.39□□□□□ -1.87
USP35Q9P2H5 AC004584.2-201ENST00000570407 410 ntBASIC3.39□□□□□ -1.87
USP35Q9P2H5 MIR5194-201ENST00000582634 120 ntBASIC3.39□□□□□ -1.87
USP35Q9P2H5 MIR5006-201ENST00000583027 110 ntBASIC3.39□□□□□ -1.87
USP35Q9P2H5 AL031274.2-201ENST00000599419 203 ntBASIC3.39□□□□□ -1.87
USP35Q9P2H5 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.39□□□□□ -1.87
USP35Q9P2H5 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.39□□□□□ -1.87
USP35Q9P2H5 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.39□□□□□ -1.87
USP35Q9P2H5 ZNF204P-201ENST00000416749 2397 ntBASIC3.39□□□□□ -1.87
USP35Q9P2H5 MTND5P10-201ENST00000603719 1809 ntBASIC3.38□□□□□ -1.87
USP35Q9P2H5 RNA5SP393-201ENST00000363423 117 ntBASIC3.38□□□□□ -1.87
USP35Q9P2H5 Y_RNA.187-201ENST00000363918 113 ntBASIC3.38□□□□□ -1.87
USP35Q9P2H5 SNORA3A-201ENST00000364113 130 ntBASIC3.38□□□□□ -1.87
USP35Q9P2H5 Y_RNA.238-201ENST00000364441 102 ntBASIC3.38□□□□□ -1.87
USP35Q9P2H5 MIR487A-201ENST00000385009 80 ntBASIC3.38□□□□□ -1.87
USP35Q9P2H5 MIR300-201ENST00000401138 83 ntBASIC3.38□□□□□ -1.87
USP35Q9P2H5 RNA5SP270-201ENST00000411361 118 ntBASIC3.38□□□□□ -1.87
USP35Q9P2H5 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.38□□□□□ -1.87
USP35Q9P2H5 MTND3P23-201ENST00000431980 347 ntBASIC3.38□□□□□ -1.87
USP35Q9P2H5 RNU6-470P-201ENST00000515954 104 ntBASIC3.38□□□□□ -1.87
USP35Q9P2H5 RNU6-344P-201ENST00000516635 111 ntBASIC3.38□□□□□ -1.87
USP35Q9P2H5 C8orf59P2-201ENST00000603441 271 ntBASIC3.38□□□□□ -1.87
USP35Q9P2H5 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
USP35Q9P2H5 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
USP35Q9P2H5 Y_RNA.364-201ENST00000365532 101 ntBASIC3.37□□□□□ -1.87
USP35Q9P2H5 SNORD14D-201ENST00000384390 87 ntBASIC3.37□□□□□ -1.87
USP35Q9P2H5 5S_rRNA.2-201ENST00000391293 112 ntBASIC3.37□□□□□ -1.87
USP35Q9P2H5 MTCO3P8-201ENST00000453691 755 ntBASIC3.37□□□□□ -1.87
USP35Q9P2H5 AC016925.1-201ENST00000458303 298 ntBASIC3.37□□□□□ -1.87
USP35Q9P2H5 AC022493.2-201ENST00000506122 481 ntBASIC3.37□□□□□ -1.87
USP35Q9P2H5 ATP5EP1-201ENST00000510257 156 ntBASIC3.37□□□□□ -1.87
USP35Q9P2H5 RNU6-1114P-201ENST00000516022 107 ntBASIC3.37□□□□□ -1.87
USP35Q9P2H5 Y_RNA.675-201ENST00000516389 149 ntBASIC3.37□□□□□ -1.87
USP35Q9P2H5 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.37□□□□□ -1.87
USP35Q9P2H5 AC009127.3-201ENST00000570531 403 ntBASIC3.37□□□□□ -1.87
USP35Q9P2H5 AC084781.2-201ENST00000615568 161 ntBASIC3.37□□□□□ -1.87
USP35Q9P2H5 AL359314.1-201ENST00000616913 261 ntBASIC3.37□□□□□ -1.87
USP35Q9P2H5 AC104985.2-201ENST00000620598 500 ntBASIC3.37□□□□□ -1.87
USP35Q9P2H5 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3.37□□□□□ -1.87
USP35Q9P2H5 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
USP35Q9P2H5 RNU1-62P-201ENST00000362599 164 ntBASIC3.36□□□□□ -1.87
USP35Q9P2H5 RNU6-1026P-201ENST00000384465 108 ntBASIC3.36□□□□□ -1.87
USP35Q9P2H5 MIR1262-201ENST00000408276 93 ntBASIC3.36□□□□□ -1.87
USP35Q9P2H5 RNU6-1304P-201ENST00000411374 106 ntBASIC3.36□□□□□ -1.87
USP35Q9P2H5 USP9YP16-201ENST00000430287 407 ntBASIC3.36□□□□□ -1.87
USP35Q9P2H5 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.36□□□□□ -1.87
USP35Q9P2H5 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC3.36□□□□□ -1.87
USP35Q9P2H5 USP9YP23-201ENST00000455085 407 ntBASIC3.36□□□□□ -1.87
USP35Q9P2H5 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.36□□□□□ -1.87
USP35Q9P2H5 Y_RNA.673-201ENST00000516306 88 ntBASIC3.36□□□□□ -1.87
USP35Q9P2H5 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC3.36□□□□□ -1.87
USP35Q9P2H5 AC087441.2-201ENST00000529141 262 ntBASIC3.36□□□□□ -1.87
USP35Q9P2H5 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.36□□□□□ -1.87
USP35Q9P2H5 PRELID2P1-201ENST00000552837 301 ntBASIC3.36□□□□□ -1.87
USP35Q9P2H5 ANP32BP3-201ENST00000559213 706 ntBASIC3.36□□□□□ -1.87
USP35Q9P2H5 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.36□□□□□ -1.87
USP35Q9P2H5 FO624990.1-201ENST00000636373 85 ntBASIC3.36□□□□□ -1.87
USP35Q9P2H5 RNU6-490P-201ENST00000362985 107 ntBASIC3.35□□□□□ -1.87
USP35Q9P2H5 Y_RNA.106-201ENST00000363189 100 ntBASIC3.35□□□□□ -1.87
USP35Q9P2H5 Y_RNA.315-201ENST00000365117 102 ntBASIC3.35□□□□□ -1.87
USP35Q9P2H5 RNU6-438P-201ENST00000365561 103 ntBASIC3.35□□□□□ -1.87
USP35Q9P2H5 RNU1-138P-201ENST00000384093 164 ntBASIC3.35□□□□□ -1.87
USP35Q9P2H5 AC123900.1-201ENST00000420390 96 ntBASIC3.35□□□□□ -1.87
USP35Q9P2H5 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC3.35□□□□□ -1.87
USP35Q9P2H5 AF228730.4-201ENST00000421457 183 ntBASIC3.35□□□□□ -1.87
USP35Q9P2H5 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC3.35□□□□□ -1.87
USP35Q9P2H5 AP000870.1-201ENST00000472927 406 ntBASIC3.35□□□□□ -1.87
USP35Q9P2H5 AC234781.5-201ENST00000508429 271 ntBASIC3.35□□□□□ -1.87
USP35Q9P2H5 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3.35□□□□□ -1.87
USP35Q9P2H5 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.35□□□□□ -1.87
USP35Q9P2H5 SNORA31.11-201ENST00000516528 139 ntBASIC3.35□□□□□ -1.87
USP35Q9P2H5 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC3.35□□□□□ -1.87
USP35Q9P2H5 CYP2C61P-201ENST00000604072 290 ntBASIC3.35□□□□□ -1.87
USP35Q9P2H5 RNU6-1040P-201ENST00000383974 107 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms