Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 U6.115-201ENST00000636045 103 ntBASIC3.87□□□□□ -1.79
CNTN3Q9P232 U6.105-201ENST00000637379 88 ntBASIC3.87□□□□□ -1.79
CNTN3Q9P232 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CNTN3Q9P232 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.87□□□□□ -1.79
CNTN3Q9P232 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.86□□□□□ -1.79
CNTN3Q9P232 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.86□□□□□ -1.79
CNTN3Q9P232 SNORA63.1-201ENST00000362493 131 ntBASIC3.86□□□□□ -1.79
CNTN3Q9P232 RNU6-1290P-201ENST00000362957 109 ntBASIC3.86□□□□□ -1.79
CNTN3Q9P232 MIR569-201ENST00000385228 96 ntBASIC3.86□□□□□ -1.79
CNTN3Q9P232 MIR526A2-201ENST00000390198 65 ntBASIC3.86□□□□□ -1.79
CNTN3Q9P232 RNU6-855P-201ENST00000410395 104 ntBASIC3.86□□□□□ -1.79
CNTN3Q9P232 AL139281.1-201ENST00000422120 335 ntBASIC3.86□□□□□ -1.79
CNTN3Q9P232 RN7SL330P-201ENST00000469709 307 ntBASIC3.86□□□□□ -1.79
CNTN3Q9P232 RNU6-426P-201ENST00000516464 97 ntBASIC3.86□□□□□ -1.79
CNTN3Q9P232 HSPE1P18-201ENST00000517602 280 ntBASIC3.86□□□□□ -1.79
CNTN3Q9P232 AC012314.7-201ENST00000619693 93 ntBASIC3.86□□□□□ -1.79
CNTN3Q9P232 AP003355.3-201ENST00000623465 114 ntBASIC3.86□□□□□ -1.79
CNTN3Q9P232 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
CNTN3Q9P232 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
CNTN3Q9P232 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CNTN3Q9P232 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CNTN3Q9P232 AC134026.1-201ENST00000623249 2239 ntBASIC3.86□□□□□ -1.79
CNTN3Q9P232 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CNTN3Q9P232 AC103988.1-201ENST00000566382 2177 ntBASIC3.85□□□□□ -1.79
CNTN3Q9P232 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CNTN3Q9P232 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.85□□□□□ -1.79
CNTN3Q9P232 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.85□□□□□ -1.79
CNTN3Q9P232 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CNTN3Q9P232 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
CNTN3Q9P232 SNORD114-7-201ENST00000362520 77 ntBASIC3.85□□□□□ -1.79
CNTN3Q9P232 AP002088.1-201ENST00000382740 395 ntBASIC3.85□□□□□ -1.79
CNTN3Q9P232 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC3.85□□□□□ -1.79
CNTN3Q9P232 AC074290.1-201ENST00000448883 135 ntBASIC3.85□□□□□ -1.79
CNTN3Q9P232 AC112771.1-201ENST00000463581 102 ntBASIC3.85□□□□□ -1.79
CNTN3Q9P232 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.85□□□□□ -1.79
CNTN3Q9P232 RPS29P2-201ENST00000479278 136 ntBASIC3.85□□□□□ -1.79
CNTN3Q9P232 RPL36AP48-201ENST00000485521 314 ntBASIC3.85□□□□□ -1.79
CNTN3Q9P232 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.85□□□□□ -1.79
CNTN3Q9P232 RN7SKP83-201ENST00000516512 178 ntBASIC3.85□□□□□ -1.79
CNTN3Q9P232 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC3.85□□□□□ -1.79
CNTN3Q9P232 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.85□□□□□ -1.79
CNTN3Q9P232 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.85□□□□□ -1.79
CNTN3Q9P232 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.85□□□□□ -1.79
CNTN3Q9P232 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
CNTN3Q9P232 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CNTN3Q9P232 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CNTN3Q9P232 snoU2_19.4-201ENST00000364329 80 ntBASIC3.84□□□□□ -1.79
CNTN3Q9P232 Y_RNA.310-201ENST00000365063 113 ntBASIC3.84□□□□□ -1.79
CNTN3Q9P232 MIR616-201ENST00000385293 97 ntBASIC3.84□□□□□ -1.79
CNTN3Q9P232 AC022616.8-201ENST00000533569 253 ntBASIC3.84□□□□□ -1.79
CNTN3Q9P232 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.84□□□□□ -1.79
CNTN3Q9P232 MIR3944-201ENST00000581277 108 ntBASIC3.84□□□□□ -1.79
CNTN3Q9P232 DNAJC19P2-201ENST00000593340 302 ntBASIC3.84□□□□□ -1.79
CNTN3Q9P232 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.84□□□□□ -1.79
CNTN3Q9P232 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.84□□□□□ -1.8
CNTN3Q9P232 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CNTN3Q9P232 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.83□□□□□ -1.8
CNTN3Q9P232 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.83□□□□□ -1.8
CNTN3Q9P232 AC006504.1-201ENST00000562493 3666 ntBASIC3.83□□□□□ -1.8
CNTN3Q9P232 RNA5SP42-201ENST00000364278 115 ntBASIC3.83□□□□□ -1.8
CNTN3Q9P232 RNU6-144P-201ENST00000383951 107 ntBASIC3.83□□□□□ -1.8
CNTN3Q9P232 MIR586-201ENST00000385035 97 ntBASIC3.83□□□□□ -1.8
CNTN3Q9P232 SNORA40-201ENST00000388090 126 ntBASIC3.83□□□□□ -1.8
CNTN3Q9P232 RNU6-257P-201ENST00000410238 98 ntBASIC3.83□□□□□ -1.8
CNTN3Q9P232 RPL30P13-201ENST00000418873 348 ntBASIC3.83□□□□□ -1.8
CNTN3Q9P232 ARF4P2-201ENST00000430209 526 ntBASIC3.83□□□□□ -1.8
CNTN3Q9P232 AC008267.6-201ENST00000441664 139 ntBASIC3.83□□□□□ -1.8
CNTN3Q9P232 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.83□□□□□ -1.8
CNTN3Q9P232 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.83□□□□□ -1.8
CNTN3Q9P232 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.83□□□□□ -1.8
CNTN3Q9P232 AL391903.3-201ENST00000612158 163 ntBASIC3.83□□□□□ -1.8
CNTN3Q9P232 U7.8-201ENST00000619968 63 ntBASIC3.83□□□□□ -1.8
CNTN3Q9P232 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
CNTN3Q9P232 AC010332.2-201ENST00000613083 1904 ntBASIC3.83□□□□□ -1.8
CNTN3Q9P232 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
CNTN3Q9P232 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CNTN3Q9P232 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CNTN3Q9P232 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CNTN3Q9P232 AC110774.1-201ENST00000623567 2018 ntBASIC3.82□□□□□ -1.8
CNTN3Q9P232 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CNTN3Q9P232 Y_RNA.24-201ENST00000362508 103 ntBASIC3.82□□□□□ -1.8
CNTN3Q9P232 RNU6-1205P-201ENST00000363625 106 ntBASIC3.82□□□□□ -1.8
CNTN3Q9P232 Y_RNA.337-201ENST00000365312 102 ntBASIC3.82□□□□□ -1.8
CNTN3Q9P232 SNORA22C-201ENST00000384614 134 ntBASIC3.82□□□□□ -1.8
CNTN3Q9P232 MIR548B-201ENST00000385247 97 ntBASIC3.82□□□□□ -1.8
CNTN3Q9P232 MIR513C-201ENST00000401352 84 ntBASIC3.82□□□□□ -1.8
CNTN3Q9P232 RNU6-735P-201ENST00000410612 107 ntBASIC3.82□□□□□ -1.8
CNTN3Q9P232 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.82□□□□□ -1.8
CNTN3Q9P232 RPS29P31-201ENST00000446147 164 ntBASIC3.82□□□□□ -1.8
CNTN3Q9P232 AC091153.1-201ENST00000466297 402 ntBASIC3.82□□□□□ -1.8
CNTN3Q9P232 AC109810.1-201ENST00000534066 224 ntBASIC3.82□□□□□ -1.8
CNTN3Q9P232 MIR5047-201ENST00000579212 100 ntBASIC3.82□□□□□ -1.8
CNTN3Q9P232 MIR7975-201ENST00000619350 68 ntBASIC3.82□□□□□ -1.8
CNTN3Q9P232 U4.6-201ENST00000621618 127 ntBASIC3.82□□□□□ -1.8
CNTN3Q9P232 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CNTN3Q9P232 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
CNTN3Q9P232 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CNTN3Q9P232 MFSD8-233ENST00000641482 4860 ntBASIC3.82□□□□□ -1.8
CNTN3Q9P232 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CNTN3Q9P232 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 228.4 ms