Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 AC015911.1-201ENST00000495111 156 ntBASIC0.27□□□□□ -2.37
PHRF1Q9P1Y6 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.27□□□□□ -2.37
PHRF1Q9P1Y6 AC016550.1-201ENST00000505348 785 ntBASIC0.27□□□□□ -2.37
PHRF1Q9P1Y6 RNU6-947P-201ENST00000516264 106 ntBASIC0.27□□□□□ -2.37
PHRF1Q9P1Y6 AC023050.3-201ENST00000541142 333 ntBASIC0.27□□□□□ -2.37
PHRF1Q9P1Y6 AC110760.3-201ENST00000598794 467 ntBASIC0.27□□□□□ -2.37
PHRF1Q9P1Y6 uc_338.11-201ENST00000619132 160 ntBASIC0.27□□□□□ -2.37
PHRF1Q9P1Y6 AP002782.1-201ENST00000623107 614 ntBASIC0.27□□□□□ -2.37
PHRF1Q9P1Y6 RNY4P16-201ENST00000364768 94 ntBASIC0.26□□□□□ -2.37
PHRF1Q9P1Y6 RNU4-12P-201ENST00000365233 139 ntBASIC0.26□□□□□ -2.37
PHRF1Q9P1Y6 RNU6-877P-201ENST00000383868 107 ntBASIC0.26□□□□□ -2.37
PHRF1Q9P1Y6 SNORA24.1-201ENST00000384401 135 ntBASIC0.26□□□□□ -2.37
PHRF1Q9P1Y6 RNU6-1237P-201ENST00000384777 107 ntBASIC0.26□□□□□ -2.37
PHRF1Q9P1Y6 MIR1283-1-201ENST00000408494 87 ntBASIC0.26□□□□□ -2.37
PHRF1Q9P1Y6 EEF1A1P40-201ENST00000412883 573 ntBASIC0.26□□□□□ -2.37
PHRF1Q9P1Y6 MTND2P9-201ENST00000422293 931 ntBASIC0.26□□□□□ -2.37
PHRF1Q9P1Y6 AC010154.1-201ENST00000425857 269 ntBASIC0.26□□□□□ -2.37
PHRF1Q9P1Y6 MTND3P1-201ENST00000441336 220 ntBASIC0.26□□□□□ -2.37
PHRF1Q9P1Y6 AL358794.1-201ENST00000445689 381 ntBASIC0.26□□□□□ -2.37
PHRF1Q9P1Y6 snoU109.3-201ENST00000459477 145 ntBASIC0.26□□□□□ -2.37
PHRF1Q9P1Y6 RNU7-94P-201ENST00000459576 63 ntBASIC0.26□□□□□ -2.37
PHRF1Q9P1Y6 SNRPGP7-201ENST00000469016 106 ntBASIC0.26□□□□□ -2.37
PHRF1Q9P1Y6 AC098869.1-201ENST00000481627 292 ntBASIC0.26□□□□□ -2.37
PHRF1Q9P1Y6 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.26□□□□□ -2.37
PHRF1Q9P1Y6 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC0.26□□□□□ -2.37
PHRF1Q9P1Y6 RNU6-123P-201ENST00000516163 102 ntBASIC0.26□□□□□ -2.37
PHRF1Q9P1Y6 AC090049.2-201ENST00000550377 109 ntBASIC0.26□□□□□ -2.37
PHRF1Q9P1Y6 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.26□□□□□ -2.37
PHRF1Q9P1Y6 AC004584.2-201ENST00000570407 410 ntBASIC0.26□□□□□ -2.37
PHRF1Q9P1Y6 AL929325.1-201ENST00000603096 117 ntBASIC0.26□□□□□ -2.37
PHRF1Q9P1Y6 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.26□□□□□ -2.37
PHRF1Q9P1Y6 AC104465.1-201ENST00000611365 139 ntBASIC0.26□□□□□ -2.37
PHRF1Q9P1Y6 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.26□□□□□ -2.37
PHRF1Q9P1Y6 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
PHRF1Q9P1Y6 RNU6-428P-201ENST00000362942 107 ntBASIC0.25□□□□□ -2.37
PHRF1Q9P1Y6 Y_RNA.124-201ENST00000363339 93 ntBASIC0.25□□□□□ -2.37
PHRF1Q9P1Y6 RPS26P5-201ENST00000418544 335 ntBASIC0.25□□□□□ -2.37
PHRF1Q9P1Y6 MTCYBP1-201ENST00000454315 1119 ntBASIC0.25□□□□□ -2.37
PHRF1Q9P1Y6 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.25□□□□□ -2.37
PHRF1Q9P1Y6 RBBP4P6-201ENST00000508098 202 ntBASIC0.25□□□□□ -2.37
PHRF1Q9P1Y6 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.25□□□□□ -2.37
PHRF1Q9P1Y6 AC078795.3-201ENST00000602913 472 ntBASIC0.25□□□□□ -2.37
PHRF1Q9P1Y6 AL031281.1-201ENST00000604049 488 ntBASIC0.25□□□□□ -2.37
PHRF1Q9P1Y6 AL360219.1-201ENST00000610230 366 ntBASIC0.25□□□□□ -2.37
PHRF1Q9P1Y6 AC009509.4-201ENST00000619202 509 ntBASIC0.25□□□□□ -2.37
PHRF1Q9P1Y6 AL359697.1-201ENST00000624879 587 ntBASIC0.25□□□□□ -2.37
PHRF1Q9P1Y6 SNORD3E-202ENST00000627253 216 ntBASIC0.25□□□□□ -2.37
PHRF1Q9P1Y6 snoU2-30.2-201ENST00000362805 70 ntBASIC0.24□□□□□ -2.37
PHRF1Q9P1Y6 SNORD114-15-201ENST00000364687 72 ntBASIC0.24□□□□□ -2.37
PHRF1Q9P1Y6 SNORD32A-201ENST00000364805 84 ntBASIC0.24□□□□□ -2.37
PHRF1Q9P1Y6 SNORA4.2-201ENST00000365313 147 ntBASIC0.24□□□□□ -2.37
PHRF1Q9P1Y6 Y_RNA.363-201ENST00000365529 113 ntBASIC0.24□□□□□ -2.37
PHRF1Q9P1Y6 RNU6-975P-201ENST00000384296 105 ntBASIC0.24□□□□□ -2.37
PHRF1Q9P1Y6 RNU6-45P-201ENST00000384471 107 ntBASIC0.24□□□□□ -2.37
PHRF1Q9P1Y6 RNU6-440P-201ENST00000390882 105 ntBASIC0.24□□□□□ -2.37
PHRF1Q9P1Y6 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
PHRF1Q9P1Y6 EEF1A1P39-201ENST00000440791 250 ntBASIC0.24□□□□□ -2.37
PHRF1Q9P1Y6 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.24□□□□□ -2.37
PHRF1Q9P1Y6 RPL39P39-201ENST00000455840 151 ntBASIC0.24□□□□□ -2.37
PHRF1Q9P1Y6 AC022364.2-201ENST00000457963 554 ntBASIC0.24□□□□□ -2.37
PHRF1Q9P1Y6 BET1P1-201ENST00000482276 359 ntBASIC0.24□□□□□ -2.37
PHRF1Q9P1Y6 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.24□□□□□ -2.37
PHRF1Q9P1Y6 CYCTP-201ENST00000504253 315 ntBASIC0.24□□□□□ -2.37
PHRF1Q9P1Y6 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.24□□□□□ -2.37
PHRF1Q9P1Y6 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.24□□□□□ -2.37
PHRF1Q9P1Y6 AL357312.1-201ENST00000603879 298 ntBASIC0.24□□□□□ -2.37
PHRF1Q9P1Y6 AC104458.1-201ENST00000608243 463 ntBASIC0.24□□□□□ -2.37
PHRF1Q9P1Y6 AC108747.1-201ENST00000609508 535 ntBASIC0.24□□□□□ -2.37
PHRF1Q9P1Y6 TCL6_2.1-201ENST00000615162 119 ntBASIC0.24□□□□□ -2.37
PHRF1Q9P1Y6 MIR8054-201ENST00000620877 86 ntBASIC0.24□□□□□ -2.37
PHRF1Q9P1Y6 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.24□□□□□ -2.37
PHRF1Q9P1Y6 Y_RNA.170-201ENST00000363746 110 ntBASIC0.24□□□□□ -2.37
PHRF1Q9P1Y6 RNU4-1-201ENST00000363925 141 ntBASIC0.24□□□□□ -2.37
PHRF1Q9P1Y6 RNY1P12-201ENST00000364251 105 ntBASIC0.24□□□□□ -2.37
PHRF1Q9P1Y6 RNU6-1031P-201ENST00000384773 107 ntBASIC0.24□□□□□ -2.37
PHRF1Q9P1Y6 SNORD99-201ENST00000408612 74 ntBASIC0.24□□□□□ -2.37
PHRF1Q9P1Y6 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC0.24□□□□□ -2.37
PHRF1Q9P1Y6 AC012306.1-201ENST00000423267 114 ntBASIC0.24□□□□□ -2.37
PHRF1Q9P1Y6 AC007283.2-201ENST00000424739 197 ntBASIC0.24□□□□□ -2.37
PHRF1Q9P1Y6 EXOSC3P1-201ENST00000448649 500 ntBASIC0.24□□□□□ -2.37
PHRF1Q9P1Y6 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.24□□□□□ -2.37
PHRF1Q9P1Y6 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
PHRF1Q9P1Y6 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC0.24□□□□□ -2.37
PHRF1Q9P1Y6 AC116347.2-201ENST00000514912 523 ntBASIC0.24□□□□□ -2.37
PHRF1Q9P1Y6 RNU6-758P-201ENST00000516292 89 ntBASIC0.24□□□□□ -2.37
PHRF1Q9P1Y6 AL391840.1-201ENST00000571144 367 ntBASIC0.24□□□□□ -2.37
PHRF1Q9P1Y6 AL353765.1-201ENST00000605514 183 ntBASIC0.24□□□□□ -2.37
PHRF1Q9P1Y6 AC013244.3-201ENST00000605614 388 ntBASIC0.24□□□□□ -2.37
PHRF1Q9P1Y6 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.24□□□□□ -2.37
PHRF1Q9P1Y6 AP000484.1-201ENST00000620067 1252 ntBASIC0.24□□□□□ -2.37
PHRF1Q9P1Y6 AL450472.1-202ENST00000637286 180 ntBASIC0.24□□□□□ -2.37
PHRF1Q9P1Y6 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
PHRF1Q9P1Y6 AC090625.1-201ENST00000357130 210 ntBASIC0.23□□□□□ -2.37
PHRF1Q9P1Y6 RNA5SP368-201ENST00000364298 116 ntBASIC0.23□□□□□ -2.37
PHRF1Q9P1Y6 RNU6-969P-201ENST00000383900 105 ntBASIC0.23□□□□□ -2.37
PHRF1Q9P1Y6 RNU6-700P-201ENST00000391043 107 ntBASIC0.23□□□□□ -2.37
PHRF1Q9P1Y6 RNU6-1000P-201ENST00000391066 106 ntBASIC0.23□□□□□ -2.37
PHRF1Q9P1Y6 SNORA26.3-201ENST00000391119 136 ntBASIC0.23□□□□□ -2.37
PHRF1Q9P1Y6 AF228730.1-201ENST00000397972 663 ntBASIC0.23□□□□□ -2.37
PHRF1Q9P1Y6 MIR1253-201ENST00000408273 105 ntBASIC0.23□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 142.9 ms