Protein–RNA interactions for Protein: Q9NXE4

SMPD4, Sphingomyelin phosphodiesterase 4, humanhuman

Predictions only

Length 827 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4Q9NXE4 RNU6-137P-201ENST00000363680 108 ntBASIC3.25□□□□□ -1.89
SMPD4Q9NXE4 snoU2_19.4-201ENST00000364329 80 ntBASIC3.25□□□□□ -1.89
SMPD4Q9NXE4 SNORA72.2-201ENST00000365028 127 ntBASIC3.25□□□□□ -1.89
SMPD4Q9NXE4 MIR539-201ENST00000365690 78 ntBASIC3.25□□□□□ -1.89
SMPD4Q9NXE4 RNU6-1056P-201ENST00000383996 107 ntBASIC3.25□□□□□ -1.89
SMPD4Q9NXE4 SNORD67-201ENST00000390833 111 ntBASIC3.25□□□□□ -1.89
SMPD4Q9NXE4 RNU6-763P-201ENST00000390865 106 ntBASIC3.25□□□□□ -1.89
SMPD4Q9NXE4 AC245291.1-201ENST00000419501 328 ntBASIC3.25□□□□□ -1.89
SMPD4Q9NXE4 AC124916.1-201ENST00000444020 547 ntBASIC3.25□□□□□ -1.89
SMPD4Q9NXE4 RPS27P29-201ENST00000463110 252 ntBASIC3.25□□□□□ -1.89
SMPD4Q9NXE4 AL121594.1-201ENST00000475906 575 ntBASIC3.25□□□□□ -1.89
SMPD4Q9NXE4 AL049873.1-201ENST00000480540 376 ntBASIC3.25□□□□□ -1.89
SMPD4Q9NXE4 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.25□□□□□ -1.89
SMPD4Q9NXE4 RNU1-103P-201ENST00000516502 125 ntBASIC3.25□□□□□ -1.89
SMPD4Q9NXE4 SNORA64.4-201ENST00000516632 81 ntBASIC3.25□□□□□ -1.89
SMPD4Q9NXE4 MIR5571-201ENST00000577998 113 ntBASIC3.25□□□□□ -1.89
SMPD4Q9NXE4 U6.99-201ENST00000637524 83 ntBASIC3.25□□□□□ -1.89
SMPD4Q9NXE4 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SMPD4Q9NXE4 CUL1P1-201ENST00000509510 2425 ntBASIC3.25□□□□□ -1.89
SMPD4Q9NXE4 AL359693.1-201ENST00000614959 2407 ntBASIC3.25□□□□□ -1.89
SMPD4Q9NXE4 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
SMPD4Q9NXE4 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SMPD4Q9NXE4 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SMPD4Q9NXE4 RNA5SP383-201ENST00000362934 120 ntBASIC3.24□□□□□ -1.89
SMPD4Q9NXE4 Y_RNA.172-201ENST00000363765 102 ntBASIC3.24□□□□□ -1.89
SMPD4Q9NXE4 RNU6-173P-201ENST00000364215 104 ntBASIC3.24□□□□□ -1.89
SMPD4Q9NXE4 Y_RNA.563-201ENST00000384707 108 ntBASIC3.24□□□□□ -1.89
SMPD4Q9NXE4 SNORD15B-201ENST00000384714 146 ntBASIC3.24□□□□□ -1.89
SMPD4Q9NXE4 SNORA40.19-201ENST00000390846 128 ntBASIC3.24□□□□□ -1.89
SMPD4Q9NXE4 RNU6-578P-201ENST00000390980 103 ntBASIC3.24□□□□□ -1.89
SMPD4Q9NXE4 MIR513C-201ENST00000401352 84 ntBASIC3.24□□□□□ -1.89
SMPD4Q9NXE4 Y_RNA.595-201ENST00000410403 105 ntBASIC3.24□□□□□ -1.89
SMPD4Q9NXE4 RPL27AP8-201ENST00000424277 446 ntBASIC3.24□□□□□ -1.89
SMPD4Q9NXE4 AL356867.1-201ENST00000429623 299 ntBASIC3.24□□□□□ -1.89
SMPD4Q9NXE4 AL135790.2-201ENST00000437701 267 ntBASIC3.24□□□□□ -1.89
SMPD4Q9NXE4 RNU6-625P-201ENST00000459412 107 ntBASIC3.24□□□□□ -1.89
SMPD4Q9NXE4 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.24□□□□□ -1.89
SMPD4Q9NXE4 RNU6-155P-201ENST00000516347 100 ntBASIC3.24□□□□□ -1.89
SMPD4Q9NXE4 SCARNA13-201ENST00000516672 275 ntBASIC3.24□□□□□ -1.89
SMPD4Q9NXE4 AC018448.1-201ENST00000552843 316 ntBASIC3.24□□□□□ -1.89
SMPD4Q9NXE4 EIF4BP1-201ENST00000554881 351 ntBASIC3.24□□□□□ -1.89
SMPD4Q9NXE4 MED28P6-201ENST00000558776 231 ntBASIC3.24□□□□□ -1.89
SMPD4Q9NXE4 AC020895.1-201ENST00000595362 272 ntBASIC3.24□□□□□ -1.89
SMPD4Q9NXE4 AC136601.2-201ENST00000604356 474 ntBASIC3.24□□□□□ -1.89
SMPD4Q9NXE4 AL137843.1-201ENST00000605078 385 ntBASIC3.24□□□□□ -1.89
SMPD4Q9NXE4 AC069294.1-201ENST00000608397 350 ntBASIC3.24□□□□□ -1.89
SMPD4Q9NXE4 AC010999.1-201ENST00000611856 324 ntBASIC3.24□□□□□ -1.89
SMPD4Q9NXE4 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.24□□□□□ -1.89
SMPD4Q9NXE4 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.24□□□□□ -1.89
SMPD4Q9NXE4 AC073476.4-201ENST00000628409 72 ntBASIC3.24□□□□□ -1.89
SMPD4Q9NXE4 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.24□□□□□ -1.89
SMPD4Q9NXE4 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.24□□□□□ -1.89
SMPD4Q9NXE4 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.24□□□□□ -1.89
SMPD4Q9NXE4 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SMPD4Q9NXE4 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SMPD4Q9NXE4 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
SMPD4Q9NXE4 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SMPD4Q9NXE4 SNORD56.3-201ENST00000363507 71 ntBASIC3.23□□□□□ -1.89
SMPD4Q9NXE4 RNU4-10P-201ENST00000364383 140 ntBASIC3.23□□□□□ -1.89
SMPD4Q9NXE4 RNU1-140P-201ENST00000365040 165 ntBASIC3.23□□□□□ -1.89
SMPD4Q9NXE4 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
SMPD4Q9NXE4 SNORA54-201ENST00000384281 123 ntBASIC3.23□□□□□ -1.89
SMPD4Q9NXE4 Y_RNA.572-201ENST00000384757 98 ntBASIC3.23□□□□□ -1.89
SMPD4Q9NXE4 MIR634-201ENST00000385208 97 ntBASIC3.23□□□□□ -1.89
SMPD4Q9NXE4 MIR549A-201ENST00000385268 96 ntBASIC3.23□□□□□ -1.89
SMPD4Q9NXE4 ELOCP21-201ENST00000412558 336 ntBASIC3.23□□□□□ -1.89
SMPD4Q9NXE4 AL358075.3-201ENST00000426289 226 ntBASIC3.23□□□□□ -1.89
SMPD4Q9NXE4 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.23□□□□□ -1.89
SMPD4Q9NXE4 RPS20P10-201ENST00000451209 253 ntBASIC3.23□□□□□ -1.89
SMPD4Q9NXE4 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.23□□□□□ -1.89
SMPD4Q9NXE4 AC016925.1-201ENST00000458303 298 ntBASIC3.23□□□□□ -1.89
SMPD4Q9NXE4 RN7SL330P-201ENST00000469709 307 ntBASIC3.23□□□□□ -1.89
SMPD4Q9NXE4 RPL30P12-201ENST00000474666 353 ntBASIC3.23□□□□□ -1.89
SMPD4Q9NXE4 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.23□□□□□ -1.89
SMPD4Q9NXE4 MLLT10P2-201ENST00000506434 249 ntBASIC3.23□□□□□ -1.89
SMPD4Q9NXE4 SNORA72.7-201ENST00000516349 94 ntBASIC3.23□□□□□ -1.89
SMPD4Q9NXE4 RNU6-1183P-201ENST00000517054 60 ntBASIC3.23□□□□□ -1.89
SMPD4Q9NXE4 AP004607.1-201ENST00000524456 203 ntBASIC3.23□□□□□ -1.89
SMPD4Q9NXE4 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SMPD4Q9NXE4 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SMPD4Q9NXE4 MIR3613-201ENST00000579844 87 ntBASIC3.23□□□□□ -1.89
SMPD4Q9NXE4 MIR4744-201ENST00000581563 82 ntBASIC3.23□□□□□ -1.89
SMPD4Q9NXE4 Y_RNA.802-201ENST00000614892 130 ntBASIC3.23□□□□□ -1.89
SMPD4Q9NXE4 MIR6129-201ENST00000616087 109 ntBASIC3.23□□□□□ -1.89
SMPD4Q9NXE4 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.23□□□□□ -1.89
SMPD4Q9NXE4 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SMPD4Q9NXE4 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.23□□□□□ -1.89
SMPD4Q9NXE4 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SMPD4Q9NXE4 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SMPD4Q9NXE4 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.22□□□□□ -1.89
SMPD4Q9NXE4 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SMPD4Q9NXE4 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SMPD4Q9NXE4 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
SMPD4Q9NXE4 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.22□□□□□ -1.89
SMPD4Q9NXE4 MTND5P35-201ENST00000557537 1720 ntBASIC3.22□□□□□ -1.89
SMPD4Q9NXE4 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SMPD4Q9NXE4 AL136164.4-201ENST00000625013 2135 ntBASIC3.22□□□□□ -1.89
SMPD4Q9NXE4 AC002546.1-201ENST00000588041 2504 ntBASIC3.22□□□□□ -1.89
SMPD4Q9NXE4 RNY1P11-201ENST00000363759 113 ntBASIC3.22□□□□□ -1.89
SMPD4Q9NXE4 RNU6-898P-201ENST00000365627 104 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 179.6 ms