Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 RN7SL810P-201ENST00000493031 276 ntBASIC4.17□□□□□ -1.74
PRDM9Q9NQV7 MRPS17P9-201ENST00000511924 393 ntBASIC4.17□□□□□ -1.74
PRDM9Q9NQV7 RNU1-61P-201ENST00000516107 151 ntBASIC4.17□□□□□ -1.74
PRDM9Q9NQV7 AC026421.1-201ENST00000519101 163 ntBASIC4.17□□□□□ -1.74
PRDM9Q9NQV7 AC109329.2-201ENST00000519658 482 ntBASIC4.17□□□□□ -1.74
PRDM9Q9NQV7 MIR4277-201ENST00000578298 84 ntBASIC4.17□□□□□ -1.74
PRDM9Q9NQV7 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PRDM9Q9NQV7 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PRDM9Q9NQV7 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
PRDM9Q9NQV7 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PRDM9Q9NQV7 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.16□□□□□ -1.74
PRDM9Q9NQV7 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PRDM9Q9NQV7 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PRDM9Q9NQV7 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
PRDM9Q9NQV7 SNORD61-201ENST00000384252 73 ntBASIC4.16□□□□□ -1.74
PRDM9Q9NQV7 HDGFP1-201ENST00000405943 252 ntBASIC4.16□□□□□ -1.74
PRDM9Q9NQV7 SNORA11F-201ENST00000408237 128 ntBASIC4.16□□□□□ -1.74
PRDM9Q9NQV7 RPL18P10-201ENST00000425606 538 ntBASIC4.16□□□□□ -1.74
PRDM9Q9NQV7 AC016717.1-201ENST00000448918 286 ntBASIC4.16□□□□□ -1.74
PRDM9Q9NQV7 AC107297.1-201ENST00000459991 176 ntBASIC4.16□□□□□ -1.74
PRDM9Q9NQV7 RPS29P21-201ENST00000496272 170 ntBASIC4.16□□□□□ -1.74
PRDM9Q9NQV7 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC4.16□□□□□ -1.74
PRDM9Q9NQV7 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.16□□□□□ -1.74
PRDM9Q9NQV7 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC4.16□□□□□ -1.74
PRDM9Q9NQV7 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.16□□□□□ -1.74
PRDM9Q9NQV7 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
PRDM9Q9NQV7 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.16□□□□□ -1.74
PRDM9Q9NQV7 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC4.16□□□□□ -1.74
PRDM9Q9NQV7 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PRDM9Q9NQV7 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.16□□□□□ -1.74
PRDM9Q9NQV7 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
PRDM9Q9NQV7 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.74
PRDM9Q9NQV7 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
PRDM9Q9NQV7 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.15□□□□□ -1.74
PRDM9Q9NQV7 MIR494-201ENST00000349529 81 ntBASIC4.15□□□□□ -1.75
PRDM9Q9NQV7 Y_RNA.107-201ENST00000363190 121 ntBASIC4.15□□□□□ -1.75
PRDM9Q9NQV7 RNU6-414P-201ENST00000363705 104 ntBASIC4.15□□□□□ -1.75
PRDM9Q9NQV7 RNU6-1134P-201ENST00000365156 101 ntBASIC4.15□□□□□ -1.75
PRDM9Q9NQV7 Y_RNA.342-201ENST00000365352 113 ntBASIC4.15□□□□□ -1.75
PRDM9Q9NQV7 SNORA19.1-201ENST00000410656 129 ntBASIC4.15□□□□□ -1.75
PRDM9Q9NQV7 AC016909.1-201ENST00000415916 166 ntBASIC4.15□□□□□ -1.75
PRDM9Q9NQV7 EIF4EP4-201ENST00000424916 578 ntBASIC4.15□□□□□ -1.75
PRDM9Q9NQV7 PHBP16-201ENST00000446318 950 ntBASIC4.15□□□□□ -1.75
PRDM9Q9NQV7 AC009220.1-201ENST00000451614 275 ntBASIC4.15□□□□□ -1.75
PRDM9Q9NQV7 RN7SL98P-201ENST00000462271 300 ntBASIC4.15□□□□□ -1.75
PRDM9Q9NQV7 RPL30P14-201ENST00000482744 348 ntBASIC4.15□□□□□ -1.75
PRDM9Q9NQV7 AC096725.1-201ENST00000514266 313 ntBASIC4.15□□□□□ -1.75
PRDM9Q9NQV7 RNU6-240P-201ENST00000516098 97 ntBASIC4.15□□□□□ -1.75
PRDM9Q9NQV7 RNY4P20-201ENST00000516678 93 ntBASIC4.15□□□□□ -1.75
PRDM9Q9NQV7 RN7SKP282-201ENST00000516824 299 ntBASIC4.15□□□□□ -1.75
PRDM9Q9NQV7 RNU7-172P-201ENST00000517125 64 ntBASIC4.15□□□□□ -1.75
PRDM9Q9NQV7 AC141557.1-201ENST00000540982 400 ntBASIC4.15□□□□□ -1.75
PRDM9Q9NQV7 AC084364.2-201ENST00000546924 395 ntBASIC4.15□□□□□ -1.75
PRDM9Q9NQV7 MIR5197-201ENST00000583721 112 ntBASIC4.15□□□□□ -1.75
PRDM9Q9NQV7 MIR4438-201ENST00000585271 93 ntBASIC4.15□□□□□ -1.75
PRDM9Q9NQV7 AL138721.1-201ENST00000616756 179 ntBASIC4.15□□□□□ -1.75
PRDM9Q9NQV7 uc_338.13-201ENST00000618243 179 ntBASIC4.15□□□□□ -1.75
PRDM9Q9NQV7 AL590808.1-201ENST00000618696 141 ntBASIC4.15□□□□□ -1.75
PRDM9Q9NQV7 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.15□□□□□ -1.75
PRDM9Q9NQV7 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.15□□□□□ -1.75
PRDM9Q9NQV7 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
PRDM9Q9NQV7 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.75
PRDM9Q9NQV7 MFSD8-236ENST00000641509 4050 ntBASIC4.15□□□□□ -1.75
PRDM9Q9NQV7 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
PRDM9Q9NQV7 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PRDM9Q9NQV7 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.14□□□□□ -1.75
PRDM9Q9NQV7 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PRDM9Q9NQV7 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PRDM9Q9NQV7 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC4.14□□□□□ -1.75
PRDM9Q9NQV7 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PRDM9Q9NQV7 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
PRDM9Q9NQV7 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
PRDM9Q9NQV7 RNU6-198P-201ENST00000384258 104 ntBASIC4.14□□□□□ -1.75
PRDM9Q9NQV7 MIR141-201ENST00000384975 95 ntBASIC4.14□□□□□ -1.75
PRDM9Q9NQV7 MIR520G-201ENST00000385064 90 ntBASIC4.14□□□□□ -1.75
PRDM9Q9NQV7 RPS26P28-201ENST00000470806 348 ntBASIC4.14□□□□□ -1.75
PRDM9Q9NQV7 NDUFA4P2-201ENST00000489989 244 ntBASIC4.14□□□□□ -1.75
PRDM9Q9NQV7 RNU6-1270P-201ENST00000517128 108 ntBASIC4.14□□□□□ -1.75
PRDM9Q9NQV7 MIR3117-201ENST00000584034 78 ntBASIC4.14□□□□□ -1.75
PRDM9Q9NQV7 AC113403.1-201ENST00000604910 193 ntBASIC4.14□□□□□ -1.75
PRDM9Q9NQV7 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
PRDM9Q9NQV7 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
PRDM9Q9NQV7 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.13□□□□□ -1.75
PRDM9Q9NQV7 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
PRDM9Q9NQV7 RNA5SP509-201ENST00000364577 119 ntBASIC4.13□□□□□ -1.75
PRDM9Q9NQV7 SNORD77.3-201ENST00000391113 65 ntBASIC4.13□□□□□ -1.75
PRDM9Q9NQV7 RPS29P17-201ENST00000430795 166 ntBASIC4.13□□□□□ -1.75
PRDM9Q9NQV7 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.13□□□□□ -1.75
PRDM9Q9NQV7 ABCF2P2-201ENST00000450549 296 ntBASIC4.13□□□□□ -1.75
PRDM9Q9NQV7 RN7SL807P-201ENST00000470923 297 ntBASIC4.13□□□□□ -1.75
PRDM9Q9NQV7 AC006445.1-201ENST00000491925 405 ntBASIC4.13□□□□□ -1.75
PRDM9Q9NQV7 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.13□□□□□ -1.75
PRDM9Q9NQV7 AL592156.1-201ENST00000508758 304 ntBASIC4.13□□□□□ -1.75
PRDM9Q9NQV7 PARP4P3-201ENST00000510265 317 ntBASIC4.13□□□□□ -1.75
PRDM9Q9NQV7 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC4.13□□□□□ -1.75
PRDM9Q9NQV7 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.13□□□□□ -1.75
PRDM9Q9NQV7 MIR7154-201ENST00000620673 73 ntBASIC4.13□□□□□ -1.75
PRDM9Q9NQV7 MIR3202-2-201ENST00000635980 79 ntBASIC4.13□□□□□ -1.75
PRDM9Q9NQV7 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PRDM9Q9NQV7 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms