Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
RNF39Q9H2S5 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
RNF39Q9H2S5 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.54□□□□□ -1.52
RNF39Q9H2S5 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RNF39Q9H2S5 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.54□□□□□ -1.52
RNF39Q9H2S5 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.54□□□□□ -1.52
RNF39Q9H2S5 SNORA16B-201ENST00000364674 135 ntBASIC5.54□□□□□ -1.52
RNF39Q9H2S5 RNY4P3-201ENST00000365254 95 ntBASIC5.54□□□□□ -1.52
RNF39Q9H2S5 Y_RNA.354-201ENST00000365448 111 ntBASIC5.54□□□□□ -1.52
RNF39Q9H2S5 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
RNF39Q9H2S5 RN7SL244P-201ENST00000493405 297 ntBASIC5.54□□□□□ -1.52
RNF39Q9H2S5 RNA5SP43-201ENST00000516559 110 ntBASIC5.54□□□□□ -1.52
RNF39Q9H2S5 RNU6-965P-201ENST00000516721 96 ntBASIC5.54□□□□□ -1.52
RNF39Q9H2S5 RNU7-28P-201ENST00000516759 62 ntBASIC5.54□□□□□ -1.52
RNF39Q9H2S5 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
RNF39Q9H2S5 MIR6839-201ENST00000620425 113 ntBASIC5.54□□□□□ -1.52
RNF39Q9H2S5 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
RNF39Q9H2S5 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RNF39Q9H2S5 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RNF39Q9H2S5 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RNF39Q9H2S5 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.53□□□□□ -1.52
RNF39Q9H2S5 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RNF39Q9H2S5 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RNF39Q9H2S5 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
RNF39Q9H2S5 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.53□□□□□ -1.52
RNF39Q9H2S5 RNA5SP388-201ENST00000362584 119 ntBASIC5.53□□□□□ -1.52
RNF39Q9H2S5 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
RNF39Q9H2S5 AC123900.1-201ENST00000420390 96 ntBASIC5.53□□□□□ -1.52
RNF39Q9H2S5 AL590399.4-201ENST00000436561 601 ntBASIC5.53□□□□□ -1.52
RNF39Q9H2S5 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.53□□□□□ -1.52
RNF39Q9H2S5 AC006466.1-201ENST00000438721 289 ntBASIC5.53□□□□□ -1.52
RNF39Q9H2S5 RNU6ATAC14P-201ENST00000516218 91 ntBASIC5.53□□□□□ -1.52
RNF39Q9H2S5 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC5.53□□□□□ -1.52
RNF39Q9H2S5 MIR338-201ENST00000636369 67 ntBASIC5.53□□□□□ -1.52
RNF39Q9H2S5 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.53□□□□□ -1.52
RNF39Q9H2S5 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RNF39Q9H2S5 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RNF39Q9H2S5 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RNF39Q9H2S5 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RNF39Q9H2S5 ZNF962P-201ENST00000443465 3140 ntBASIC5.53□□□□□ -1.52
RNF39Q9H2S5 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RNF39Q9H2S5 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC5.53□□□□□ -1.52
RNF39Q9H2S5 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RNF39Q9H2S5 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RNF39Q9H2S5 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RNF39Q9H2S5 AL138820.1-201ENST00000617901 5305 ntBASIC5.52□□□□□ -1.53
RNF39Q9H2S5 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.52□□□□□ -1.53
RNF39Q9H2S5 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.52□□□□□ -1.53
RNF39Q9H2S5 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.52□□□□□ -1.53
RNF39Q9H2S5 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC5.52□□□□□ -1.53
RNF39Q9H2S5 SNORD36A-201ENST00000362874 73 ntBASIC5.52□□□□□ -1.53
RNF39Q9H2S5 RN7SKP224-201ENST00000364140 325 ntBASIC5.52□□□□□ -1.53
RNF39Q9H2S5 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC5.52□□□□□ -1.53
RNF39Q9H2S5 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC5.52□□□□□ -1.53
RNF39Q9H2S5 RN7SL860P-201ENST00000473738 223 ntBASIC5.52□□□□□ -1.53
RNF39Q9H2S5 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.52□□□□□ -1.53
RNF39Q9H2S5 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RNF39Q9H2S5 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RNF39Q9H2S5 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RNF39Q9H2S5 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RNF39Q9H2S5 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RNF39Q9H2S5 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
RNF39Q9H2S5 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RNF39Q9H2S5 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RNF39Q9H2S5 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RNF39Q9H2S5 ZNF209P-201ENST00000593450 2304 ntBASIC5.51□□□□□ -1.53
RNF39Q9H2S5 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RNF39Q9H2S5 MFSD8-233ENST00000641482 4860 ntBASIC5.51□□□□□ -1.53
RNF39Q9H2S5 RNA5SP453-201ENST00000362503 119 ntBASIC5.51□□□□□ -1.53
RNF39Q9H2S5 RNU6-571P-201ENST00000384128 107 ntBASIC5.51□□□□□ -1.53
RNF39Q9H2S5 COX6B1P1-201ENST00000415962 213 ntBASIC5.51□□□□□ -1.53
RNF39Q9H2S5 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.51□□□□□ -1.53
RNF39Q9H2S5 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.51□□□□□ -1.53
RNF39Q9H2S5 snoU13.28-201ENST00000459235 104 ntBASIC5.51□□□□□ -1.53
RNF39Q9H2S5 RN7SL443P-201ENST00000464331 290 ntBASIC5.51□□□□□ -1.53
RNF39Q9H2S5 AC140172.1-201ENST00000502928 141 ntBASIC5.51□□□□□ -1.53
RNF39Q9H2S5 RNU6-1116P-201ENST00000517269 99 ntBASIC5.51□□□□□ -1.53
RNF39Q9H2S5 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.51□□□□□ -1.53
RNF39Q9H2S5 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
RNF39Q9H2S5 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RNF39Q9H2S5 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RNF39Q9H2S5 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RNF39Q9H2S5 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.51□□□□□ -1.53
RNF39Q9H2S5 Z83843.1-201ENST00000604070 3685 ntBASIC5.51□□□□□ -1.53
RNF39Q9H2S5 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.51□□□□□ -1.53
RNF39Q9H2S5 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
RNF39Q9H2S5 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
RNF39Q9H2S5 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
RNF39Q9H2S5 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RNF39Q9H2S5 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RNF39Q9H2S5 RNU6-243P-201ENST00000391140 107 ntBASIC5.5□□□□□ -1.53
RNF39Q9H2S5 RPS27P21-201ENST00000486977 252 ntBASIC5.5□□□□□ -1.53
RNF39Q9H2S5 RNU6-1041P-201ENST00000516254 102 ntBASIC5.5□□□□□ -1.53
RNF39Q9H2S5 MIR6820-201ENST00000611508 62 ntBASIC5.5□□□□□ -1.53
RNF39Q9H2S5 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
RNF39Q9H2S5 MIR8065-201ENST00000620577 100 ntBASIC5.5□□□□□ -1.53
RNF39Q9H2S5 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.5□□□□□ -1.53
RNF39Q9H2S5 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RNF39Q9H2S5 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.5□□□□□ -1.53
RNF39Q9H2S5 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms