Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 AC092593.1-201ENST00000515413 1815 ntBASIC2.76□□□□□ -1.97
TRIM54Q9BYV2 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.76□□□□□ -1.97
TRIM54Q9BYV2 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
TRIM54Q9BYV2 Y_RNA.153-201ENST00000363615 91 ntBASIC2.75□□□□□ -1.97
TRIM54Q9BYV2 RNU6-546P-201ENST00000383991 107 ntBASIC2.75□□□□□ -1.97
TRIM54Q9BYV2 MIR329-1-201ENST00000385028 80 ntBASIC2.75□□□□□ -1.97
TRIM54Q9BYV2 MIR95-201ENST00000385072 81 ntBASIC2.75□□□□□ -1.97
TRIM54Q9BYV2 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
TRIM54Q9BYV2 SNORD12B-201ENST00000410433 91 ntBASIC2.75□□□□□ -1.97
TRIM54Q9BYV2 AC003685.2-201ENST00000422795 395 ntBASIC2.75□□□□□ -1.97
TRIM54Q9BYV2 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.75□□□□□ -1.97
TRIM54Q9BYV2 AC009237.7-201ENST00000447357 229 ntBASIC2.75□□□□□ -1.97
TRIM54Q9BYV2 U8.20-201ENST00000459445 131 ntBASIC2.75□□□□□ -1.97
TRIM54Q9BYV2 RPS23P5-201ENST00000495419 428 ntBASIC2.75□□□□□ -1.97
TRIM54Q9BYV2 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.75□□□□□ -1.97
TRIM54Q9BYV2 RN7SKP40-201ENST00000517211 242 ntBASIC2.75□□□□□ -1.97
TRIM54Q9BYV2 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.75□□□□□ -1.97
TRIM54Q9BYV2 AC131281.1-201ENST00000522984 164 ntBASIC2.75□□□□□ -1.97
TRIM54Q9BYV2 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.75□□□□□ -1.97
TRIM54Q9BYV2 AL021879.1-201ENST00000611756 288 ntBASIC2.75□□□□□ -1.97
TRIM54Q9BYV2 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
TRIM54Q9BYV2 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
TRIM54Q9BYV2 MTND5P35-201ENST00000557537 1720 ntBASIC2.74□□□□□ -1.97
TRIM54Q9BYV2 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
TRIM54Q9BYV2 RNU6-926P-201ENST00000384075 107 ntBASIC2.74□□□□□ -1.97
TRIM54Q9BYV2 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
TRIM54Q9BYV2 AL356057.3-201ENST00000402607 340 ntBASIC2.74□□□□□ -1.97
TRIM54Q9BYV2 RNU2-32P-201ENST00000411193 191 ntBASIC2.74□□□□□ -1.97
TRIM54Q9BYV2 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.74□□□□□ -1.97
TRIM54Q9BYV2 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.74□□□□□ -1.97
TRIM54Q9BYV2 AC010469.2-201ENST00000496412 480 ntBASIC2.74□□□□□ -1.97
TRIM54Q9BYV2 MRPS35P2-201ENST00000508242 191 ntBASIC2.74□□□□□ -1.97
TRIM54Q9BYV2 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.74□□□□□ -1.97
TRIM54Q9BYV2 RNU6-1046P-201ENST00000516538 107 ntBASIC2.74□□□□□ -1.97
TRIM54Q9BYV2 RNU6-1012P-201ENST00000516606 109 ntBASIC2.74□□□□□ -1.97
TRIM54Q9BYV2 RNU6-344P-201ENST00000516635 111 ntBASIC2.74□□□□□ -1.97
TRIM54Q9BYV2 DEFB131C-201ENST00000528817 165 ntBASIC2.74□□□□□ -1.97
TRIM54Q9BYV2 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.74□□□□□ -1.97
TRIM54Q9BYV2 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
TRIM54Q9BYV2 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.74□□□□□ -1.97
TRIM54Q9BYV2 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
TRIM54Q9BYV2 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.74□□□□□ -1.97
TRIM54Q9BYV2 Y_RNA.772-201ENST00000606692 102 ntBASIC2.74□□□□□ -1.97
TRIM54Q9BYV2 SNORD11B-201ENST00000607707 90 ntBASIC2.74□□□□□ -1.97
TRIM54Q9BYV2 AC093732.2-201ENST00000607950 274 ntBASIC2.74□□□□□ -1.97
TRIM54Q9BYV2 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
TRIM54Q9BYV2 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.74□□□□□ -1.97
TRIM54Q9BYV2 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.74□□□□□ -1.97
TRIM54Q9BYV2 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.74□□□□□ -1.97
TRIM54Q9BYV2 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
TRIM54Q9BYV2 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.73□□□□□ -1.97
TRIM54Q9BYV2 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.73□□□□□ -1.97
TRIM54Q9BYV2 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
TRIM54Q9BYV2 RNU6-1145P-201ENST00000384246 107 ntBASIC2.73□□□□□ -1.97
TRIM54Q9BYV2 Y_RNA.500-201ENST00000384466 111 ntBASIC2.73□□□□□ -1.97
TRIM54Q9BYV2 MIR592-201ENST00000384959 97 ntBASIC2.73□□□□□ -1.97
TRIM54Q9BYV2 AL033519.2-201ENST00000403958 392 ntBASIC2.73□□□□□ -1.97
TRIM54Q9BYV2 RNU2-25P-201ENST00000411041 191 ntBASIC2.73□□□□□ -1.97
TRIM54Q9BYV2 RPEP5-201ENST00000441137 268 ntBASIC2.73□□□□□ -1.97
TRIM54Q9BYV2 AC104389.3-201ENST00000445629 235 ntBASIC2.73□□□□□ -1.97
TRIM54Q9BYV2 IFNA11P-201ENST00000446352 526 ntBASIC2.73□□□□□ -1.97
TRIM54Q9BYV2 UQCRBP2-201ENST00000447827 297 ntBASIC2.73□□□□□ -1.97
TRIM54Q9BYV2 AC007395.1-201ENST00000451333 677 ntBASIC2.73□□□□□ -1.97
TRIM54Q9BYV2 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.73□□□□□ -1.97
TRIM54Q9BYV2 S100A11P2-201ENST00000467589 312 ntBASIC2.73□□□□□ -1.97
TRIM54Q9BYV2 AC091179.3-201ENST00000474761 144 ntBASIC2.73□□□□□ -1.97
TRIM54Q9BYV2 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.73□□□□□ -1.97
TRIM54Q9BYV2 MIR449C-201ENST00000516047 92 ntBASIC2.73□□□□□ -1.97
TRIM54Q9BYV2 SNORA40.15-201ENST00000516884 107 ntBASIC2.73□□□□□ -1.97
TRIM54Q9BYV2 MIR4659A-201ENST00000580269 81 ntBASIC2.73□□□□□ -1.97
TRIM54Q9BYV2 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
TRIM54Q9BYV2 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.73□□□□□ -1.97
TRIM54Q9BYV2 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
TRIM54Q9BYV2 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
TRIM54Q9BYV2 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.72□□□□□ -1.97
TRIM54Q9BYV2 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
TRIM54Q9BYV2 RNU6-727P-201ENST00000363592 107 ntBASIC2.72□□□□□ -1.97
TRIM54Q9BYV2 Y_RNA.210-201ENST00000364161 110 ntBASIC2.72□□□□□ -1.97
TRIM54Q9BYV2 RNA5SP125-201ENST00000364843 120 ntBASIC2.72□□□□□ -1.97
TRIM54Q9BYV2 RNU6-234P-201ENST00000365229 104 ntBASIC2.72□□□□□ -1.97
TRIM54Q9BYV2 Y_RNA.439-201ENST00000384119 94 ntBASIC2.72□□□□□ -1.97
TRIM54Q9BYV2 Y_RNA.458-201ENST00000384240 102 ntBASIC2.72□□□□□ -1.97
TRIM54Q9BYV2 RNU6-1026P-201ENST00000384465 108 ntBASIC2.72□□□□□ -1.97
TRIM54Q9BYV2 MIR561-201ENST00000385216 97 ntBASIC2.72□□□□□ -1.97
TRIM54Q9BYV2 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
TRIM54Q9BYV2 SNORA48.5-201ENST00000391143 135 ntBASIC2.72□□□□□ -1.97
TRIM54Q9BYV2 MRPL35P1-201ENST00000404272 572 ntBASIC2.72□□□□□ -1.97
TRIM54Q9BYV2 AC073910.1-201ENST00000445047 438 ntBASIC2.72□□□□□ -1.97
TRIM54Q9BYV2 PCNPP5-201ENST00000452246 481 ntBASIC2.72□□□□□ -1.97
TRIM54Q9BYV2 MTATP8P1-201ENST00000467115 207 ntBASIC2.72□□□□□ -1.97
TRIM54Q9BYV2 AC003982.1-202ENST00000469928 248 ntBASIC2.72□□□□□ -1.97
TRIM54Q9BYV2 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.72□□□□□ -1.97
TRIM54Q9BYV2 AC067942.3-201ENST00000512025 362 ntBASIC2.72□□□□□ -1.97
TRIM54Q9BYV2 RNU6-397P-201ENST00000516226 104 ntBASIC2.72□□□□□ -1.97
TRIM54Q9BYV2 RNU6-965P-201ENST00000516721 96 ntBASIC2.72□□□□□ -1.97
TRIM54Q9BYV2 RNU6-1098P-201ENST00000516772 96 ntBASIC2.72□□□□□ -1.97
TRIM54Q9BYV2 AC109329.2-201ENST00000519658 482 ntBASIC2.72□□□□□ -1.97
TRIM54Q9BYV2 AC022616.8-201ENST00000533569 253 ntBASIC2.72□□□□□ -1.97
TRIM54Q9BYV2 AL117187.1-201ENST00000555482 181 ntBASIC2.72□□□□□ -1.97
TRIM54Q9BYV2 MZT1P2-201ENST00000604387 248 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms