Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 SNRPEP8-201ENST00000442866 260 ntBASIC1.08□□□□□ -2.24
SHANK2-AS3Q9BTD1 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.08□□□□□ -2.24
SHANK2-AS3Q9BTD1 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.08□□□□□ -2.24
SHANK2-AS3Q9BTD1 RNU7-187P-201ENST00000458985 68 ntBASIC1.08□□□□□ -2.24
SHANK2-AS3Q9BTD1 RNU6-548P-201ENST00000517083 115 ntBASIC1.08□□□□□ -2.24
SHANK2-AS3Q9BTD1 AC016957.1-201ENST00000534895 309 ntBASIC1.08□□□□□ -2.24
SHANK2-AS3Q9BTD1 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.08□□□□□ -2.24
SHANK2-AS3Q9BTD1 MIR3672-201ENST00000584290 82 ntBASIC1.08□□□□□ -2.24
SHANK2-AS3Q9BTD1 MIR8076-201ENST00000611401 83 ntBASIC1.08□□□□□ -2.24
SHANK2-AS3Q9BTD1 AL138726.1-201ENST00000614873 333 ntBASIC1.08□□□□□ -2.24
SHANK2-AS3Q9BTD1 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.08□□□□□ -2.24
SHANK2-AS3Q9BTD1 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
SHANK2-AS3Q9BTD1 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.07□□□□□ -2.24
SHANK2-AS3Q9BTD1 RNU6-562P-201ENST00000362731 107 ntBASIC1.07□□□□□ -2.24
SHANK2-AS3Q9BTD1 RNU6-112P-201ENST00000363599 104 ntBASIC1.07□□□□□ -2.24
SHANK2-AS3Q9BTD1 RNU6-60P-201ENST00000364792 103 ntBASIC1.07□□□□□ -2.24
SHANK2-AS3Q9BTD1 RNA5SP190-201ENST00000365222 118 ntBASIC1.07□□□□□ -2.24
SHANK2-AS3Q9BTD1 RNU6-128P-201ENST00000383976 107 ntBASIC1.07□□□□□ -2.24
SHANK2-AS3Q9BTD1 U8.10-201ENST00000384260 133 ntBASIC1.07□□□□□ -2.24
SHANK2-AS3Q9BTD1 RNU6-95P-201ENST00000384697 107 ntBASIC1.07□□□□□ -2.24
SHANK2-AS3Q9BTD1 MIR758-201ENST00000390227 88 ntBASIC1.07□□□□□ -2.24
SHANK2-AS3Q9BTD1 RNU6-332P-201ENST00000391193 108 ntBASIC1.07□□□□□ -2.24
SHANK2-AS3Q9BTD1 MIR208B-201ENST00000401172 77 ntBASIC1.07□□□□□ -2.24
SHANK2-AS3Q9BTD1 AL590002.1-201ENST00000406554 418 ntBASIC1.07□□□□□ -2.24
SHANK2-AS3Q9BTD1 AC099677.2-201ENST00000436385 175 ntBASIC1.07□□□□□ -2.24
SHANK2-AS3Q9BTD1 AC079354.2-201ENST00000453523 154 ntBASIC1.07□□□□□ -2.24
SHANK2-AS3Q9BTD1 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.07□□□□□ -2.24
SHANK2-AS3Q9BTD1 RPS29P23-201ENST00000458635 123 ntBASIC1.07□□□□□ -2.24
SHANK2-AS3Q9BTD1 snoU13.15-201ENST00000459407 104 ntBASIC1.07□□□□□ -2.24
SHANK2-AS3Q9BTD1 AC007215.1-201ENST00000464893 276 ntBASIC1.07□□□□□ -2.24
SHANK2-AS3Q9BTD1 AC010531.2-201ENST00000465012 153 ntBASIC1.07□□□□□ -2.24
SHANK2-AS3Q9BTD1 AC087477.1-201ENST00000465747 340 ntBASIC1.07□□□□□ -2.24
SHANK2-AS3Q9BTD1 MTCO1P29-201ENST00000496868 288 ntBASIC1.07□□□□□ -2.24
SHANK2-AS3Q9BTD1 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.07□□□□□ -2.24
SHANK2-AS3Q9BTD1 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.07□□□□□ -2.24
SHANK2-AS3Q9BTD1 AC116337.1-201ENST00000509680 687 ntBASIC1.07□□□□□ -2.24
SHANK2-AS3Q9BTD1 AC025465.3-201ENST00000510570 311 ntBASIC1.07□□□□□ -2.24
SHANK2-AS3Q9BTD1 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.07□□□□□ -2.24
SHANK2-AS3Q9BTD1 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.07□□□□□ -2.24
SHANK2-AS3Q9BTD1 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.07□□□□□ -2.24
SHANK2-AS3Q9BTD1 AC015720.1-201ENST00000565251 277 ntBASIC1.07□□□□□ -2.24
SHANK2-AS3Q9BTD1 AC016727.2-201ENST00000603988 621 ntBASIC1.07□□□□□ -2.24
SHANK2-AS3Q9BTD1 RPL17P51-201ENST00000605218 238 ntBASIC1.07□□□□□ -2.24
SHANK2-AS3Q9BTD1 PRR13P7-201ENST00000605538 430 ntBASIC1.07□□□□□ -2.24
SHANK2-AS3Q9BTD1 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.06□□□□□ -2.24
SHANK2-AS3Q9BTD1 Y_RNA.123-201ENST00000363338 102 ntBASIC1.06□□□□□ -2.24
SHANK2-AS3Q9BTD1 RNU4-13P-201ENST00000364019 141 ntBASIC1.06□□□□□ -2.24
SHANK2-AS3Q9BTD1 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
SHANK2-AS3Q9BTD1 SNORA18.2-201ENST00000383865 132 ntBASIC1.06□□□□□ -2.24
SHANK2-AS3Q9BTD1 RNU6-214P-201ENST00000384130 107 ntBASIC1.06□□□□□ -2.24
SHANK2-AS3Q9BTD1 SNORA67.2-201ENST00000384300 149 ntBASIC1.06□□□□□ -2.24
SHANK2-AS3Q9BTD1 Y_RNA.516-201ENST00000384541 124 ntBASIC1.06□□□□□ -2.24
SHANK2-AS3Q9BTD1 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
SHANK2-AS3Q9BTD1 RNU6-1093P-201ENST00000391194 107 ntBASIC1.06□□□□□ -2.24
SHANK2-AS3Q9BTD1 RNU1-78P-201ENST00000391248 165 ntBASIC1.06□□□□□ -2.24
SHANK2-AS3Q9BTD1 AL117342.1-201ENST00000404861 406 ntBASIC1.06□□□□□ -2.24
SHANK2-AS3Q9BTD1 AC139712.2-201ENST00000424302 339 ntBASIC1.06□□□□□ -2.24
SHANK2-AS3Q9BTD1 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.06□□□□□ -2.24
SHANK2-AS3Q9BTD1 MTCO3P18-201ENST00000440206 761 ntBASIC1.06□□□□□ -2.24
SHANK2-AS3Q9BTD1 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
SHANK2-AS3Q9BTD1 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.06□□□□□ -2.24
SHANK2-AS3Q9BTD1 snoU13.9-201ENST00000458927 103 ntBASIC1.06□□□□□ -2.24
SHANK2-AS3Q9BTD1 RNU7-14P-201ENST00000459331 62 ntBASIC1.06□□□□□ -2.24
SHANK2-AS3Q9BTD1 U8.21-201ENST00000459536 136 ntBASIC1.06□□□□□ -2.24
SHANK2-AS3Q9BTD1 RNU6-314P-201ENST00000516574 104 ntBASIC1.06□□□□□ -2.24
SHANK2-AS3Q9BTD1 AC109635.3-201ENST00000529536 185 ntBASIC1.06□□□□□ -2.24
SHANK2-AS3Q9BTD1 AC026371.1-201ENST00000551867 419 ntBASIC1.06□□□□□ -2.24
SHANK2-AS3Q9BTD1 AC008269.2-201ENST00000561915 1105 ntBASIC1.06□□□□□ -2.24
SHANK2-AS3Q9BTD1 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.06□□□□□ -2.24
SHANK2-AS3Q9BTD1 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.06□□□□□ -2.24
SHANK2-AS3Q9BTD1 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
SHANK2-AS3Q9BTD1 AC090517.2-201ENST00000614966 680 ntBASIC1.06□□□□□ -2.24
SHANK2-AS3Q9BTD1 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.06□□□□□ -2.24
SHANK2-AS3Q9BTD1 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.06□□□□□ -2.24
SHANK2-AS3Q9BTD1 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
SHANK2-AS3Q9BTD1 Y_RNA.151-201ENST00000363566 112 ntBASIC1.05□□□□□ -2.24
SHANK2-AS3Q9BTD1 Y_RNA.373-201ENST00000365600 103 ntBASIC1.05□□□□□ -2.24
SHANK2-AS3Q9BTD1 Y_RNA.402-201ENST00000383972 102 ntBASIC1.05□□□□□ -2.24
SHANK2-AS3Q9BTD1 RNU6-203P-201ENST00000384038 104 ntBASIC1.05□□□□□ -2.24
SHANK2-AS3Q9BTD1 Y_RNA.450-201ENST00000384198 113 ntBASIC1.05□□□□□ -2.24
SHANK2-AS3Q9BTD1 Y_RNA.530-201ENST00000384587 101 ntBASIC1.05□□□□□ -2.24
SHANK2-AS3Q9BTD1 RNU6-296P-201ENST00000384608 107 ntBASIC1.05□□□□□ -2.24
SHANK2-AS3Q9BTD1 MIR487A-201ENST00000385009 80 ntBASIC1.05□□□□□ -2.24
SHANK2-AS3Q9BTD1 RNU6-1106P-201ENST00000390845 107 ntBASIC1.05□□□□□ -2.24
SHANK2-AS3Q9BTD1 ZNF885P-201ENST00000420174 1098 ntBASIC1.05□□□□□ -2.24
SHANK2-AS3Q9BTD1 CYCSP49-201ENST00000420810 319 ntBASIC1.05□□□□□ -2.24
SHANK2-AS3Q9BTD1 AL590632.1-201ENST00000424289 371 ntBASIC1.05□□□□□ -2.24
SHANK2-AS3Q9BTD1 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.05□□□□□ -2.24
SHANK2-AS3Q9BTD1 RPL23AP75-201ENST00000491601 451 ntBASIC1.05□□□□□ -2.24
SHANK2-AS3Q9BTD1 AC097473.1-201ENST00000508142 408 ntBASIC1.05□□□□□ -2.24
SHANK2-AS3Q9BTD1 MTND1P5-201ENST00000517906 940 ntBASIC1.05□□□□□ -2.24
SHANK2-AS3Q9BTD1 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.05□□□□□ -2.24
SHANK2-AS3Q9BTD1 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.05□□□□□ -2.24
SHANK2-AS3Q9BTD1 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.05□□□□□ -2.24
SHANK2-AS3Q9BTD1 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
SHANK2-AS3Q9BTD1 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.05□□□□□ -2.24
SHANK2-AS3Q9BTD1 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.05□□□□□ -2.24
SHANK2-AS3Q9BTD1 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.05□□□□□ -2.24
SHANK2-AS3Q9BTD1 AC090517.1-201ENST00000569307 266 ntBASIC1.05□□□□□ -2.24
SHANK2-AS3Q9BTD1 SNORA77B-201ENST00000578179 125 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms