Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 RNU7-200P-201ENST00000516105 62 ntBASIC4.03□□□□□ -1.76
CALR3Q96L12 RN7SKP164-201ENST00000516138 266 ntBASIC4.03□□□□□ -1.76
CALR3Q96L12 MIR4330-201ENST00000579077 105 ntBASIC4.03□□□□□ -1.76
CALR3Q96L12 MIR3910-1-201ENST00000580936 111 ntBASIC4.03□□□□□ -1.76
CALR3Q96L12 Y_RNA.802-201ENST00000614892 130 ntBASIC4.03□□□□□ -1.76
CALR3Q96L12 AC084757.4-201ENST00000616350 526 ntBASIC4.03□□□□□ -1.76
CALR3Q96L12 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
CALR3Q96L12 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC4.03□□□□□ -1.77
CALR3Q96L12 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CALR3Q96L12 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CALR3Q96L12 Y_RNA.75-201ENST00000362927 97 ntBASIC4.02□□□□□ -1.77
CALR3Q96L12 RNU6-1205P-201ENST00000363625 106 ntBASIC4.02□□□□□ -1.77
CALR3Q96L12 RNU6-418P-201ENST00000384035 107 ntBASIC4.02□□□□□ -1.77
CALR3Q96L12 RNU6-1235P-201ENST00000384559 107 ntBASIC4.02□□□□□ -1.77
CALR3Q96L12 RNU6-498P-201ENST00000459468 107 ntBASIC4.02□□□□□ -1.77
CALR3Q96L12 RNA5SP490-201ENST00000517141 136 ntBASIC4.02□□□□□ -1.77
CALR3Q96L12 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CALR3Q96L12 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CALR3Q96L12 U2.22-201ENST00000636441 106 ntBASIC4.02□□□□□ -1.77
CALR3Q96L12 MIR492-201ENST00000638676 116 ntBASIC4.02□□□□□ -1.77
CALR3Q96L12 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
CALR3Q96L12 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC4.02□□□□□ -1.77
CALR3Q96L12 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CALR3Q96L12 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
CALR3Q96L12 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.01□□□□□ -1.77
CALR3Q96L12 AC068700.1-201ENST00000565862 3754 ntBASIC4.01□□□□□ -1.77
CALR3Q96L12 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
CALR3Q96L12 Y_RNA.23-201ENST00000362496 106 ntBASIC4.01□□□□□ -1.77
CALR3Q96L12 AC068538.1-201ENST00000376856 336 ntBASIC4.01□□□□□ -1.77
CALR3Q96L12 Y_RNA.412-201ENST00000384001 104 ntBASIC4.01□□□□□ -1.77
CALR3Q96L12 RNA5SP424-201ENST00000390988 115 ntBASIC4.01□□□□□ -1.77
CALR3Q96L12 RNU5E-9P-201ENST00000411164 104 ntBASIC4.01□□□□□ -1.77
CALR3Q96L12 DBIP2-201ENST00000419076 262 ntBASIC4.01□□□□□ -1.77
CALR3Q96L12 AC008134.1-201ENST00000420943 193 ntBASIC4.01□□□□□ -1.77
CALR3Q96L12 HSPE1P21-201ENST00000438283 308 ntBASIC4.01□□□□□ -1.77
CALR3Q96L12 RPS29P31-201ENST00000446147 164 ntBASIC4.01□□□□□ -1.77
CALR3Q96L12 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC4.01□□□□□ -1.77
CALR3Q96L12 RNU6-1337P-201ENST00000516525 95 ntBASIC4.01□□□□□ -1.77
CALR3Q96L12 RNU2-34P-201ENST00000516534 121 ntBASIC4.01□□□□□ -1.77
CALR3Q96L12 SNORA48.11-201ENST00000517015 89 ntBASIC4.01□□□□□ -1.77
CALR3Q96L12 AC025647.1-201ENST00000517879 253 ntBASIC4.01□□□□□ -1.77
CALR3Q96L12 AL356280.1-201ENST00000603614 379 ntBASIC4.01□□□□□ -1.77
CALR3Q96L12 AC083809.1-201ENST00000615051 472 ntBASIC4.01□□□□□ -1.77
CALR3Q96L12 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CALR3Q96L12 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CALR3Q96L12 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
CALR3Q96L12 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CALR3Q96L12 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC4□□□□□ -1.77
CALR3Q96L12 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CALR3Q96L12 AL157777.2-201ENST00000258070 137 ntBASIC4□□□□□ -1.77
CALR3Q96L12 RNU6-103P-201ENST00000363686 107 ntBASIC4□□□□□ -1.77
CALR3Q96L12 Y_RNA.172-201ENST00000363765 102 ntBASIC4□□□□□ -1.77
CALR3Q96L12 RNU4-10P-201ENST00000364383 140 ntBASIC4□□□□□ -1.77
CALR3Q96L12 Y_RNA.398-201ENST00000383952 99 ntBASIC4□□□□□ -1.77
CALR3Q96L12 RPS29P33-201ENST00000456717 146 ntBASIC4□□□□□ -1.77
CALR3Q96L12 RPS26P55-201ENST00000471178 356 ntBASIC4□□□□□ -1.77
CALR3Q96L12 RN7SL601P-201ENST00000471221 293 ntBASIC4□□□□□ -1.77
CALR3Q96L12 Y_RNA.797-201ENST00000515977 94 ntBASIC4□□□□□ -1.77
CALR3Q96L12 MTND5P41-201ENST00000517498 206 ntBASIC4□□□□□ -1.77
CALR3Q96L12 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC4□□□□□ -1.77
CALR3Q96L12 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC4□□□□□ -1.77
CALR3Q96L12 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC4□□□□□ -1.77
CALR3Q96L12 MIR5688-201ENST00000580619 83 ntBASIC4□□□□□ -1.77
CALR3Q96L12 AC013412.1-201ENST00000610687 192 ntBASIC4□□□□□ -1.77
CALR3Q96L12 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4□□□□□ -1.77
CALR3Q96L12 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4□□□□□ -1.77
CALR3Q96L12 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
CALR3Q96L12 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CALR3Q96L12 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.99□□□□□ -1.77
CALR3Q96L12 RNU1-35P-201ENST00000362782 153 ntBASIC3.99□□□□□ -1.77
CALR3Q96L12 RNA5SP130-201ENST00000364431 114 ntBASIC3.99□□□□□ -1.77
CALR3Q96L12 Y_RNA.272-201ENST00000364696 102 ntBASIC3.99□□□□□ -1.77
CALR3Q96L12 RNU6-283P-201ENST00000364788 107 ntBASIC3.99□□□□□ -1.77
CALR3Q96L12 RNU6-407P-201ENST00000365280 104 ntBASIC3.99□□□□□ -1.77
CALR3Q96L12 RNU6-144P-201ENST00000383951 107 ntBASIC3.99□□□□□ -1.77
CALR3Q96L12 MIR184-201ENST00000384962 84 ntBASIC3.99□□□□□ -1.77
CALR3Q96L12 MIR526A2-201ENST00000390198 65 ntBASIC3.99□□□□□ -1.77
CALR3Q96L12 MIR1289-1-201ENST00000408836 144 ntBASIC3.99□□□□□ -1.77
CALR3Q96L12 RNU2-63P-201ENST00000410792 194 ntBASIC3.99□□□□□ -1.77
CALR3Q96L12 AC005840.1-201ENST00000498412 377 ntBASIC3.99□□□□□ -1.77
CALR3Q96L12 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.99□□□□□ -1.77
CALR3Q96L12 SNORA62.6-201ENST00000606322 83 ntBASIC3.99□□□□□ -1.77
CALR3Q96L12 AC096577.2-201ENST00000611455 153 ntBASIC3.99□□□□□ -1.77
CALR3Q96L12 RNVU1-4-201ENST00000612985 164 ntBASIC3.99□□□□□ -1.77
CALR3Q96L12 AC006435.5-201ENST00000624486 112 ntBASIC3.99□□□□□ -1.77
CALR3Q96L12 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CALR3Q96L12 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
CALR3Q96L12 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
CALR3Q96L12 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CALR3Q96L12 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.98□□□□□ -1.77
CALR3Q96L12 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CALR3Q96L12 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CALR3Q96L12 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CALR3Q96L12 MIR518C-201ENST00000384822 101 ntBASIC3.98□□□□□ -1.77
CALR3Q96L12 Y_RNA.580-201ENST00000391004 95 ntBASIC3.98□□□□□ -1.77
CALR3Q96L12 AL356095.1-201ENST00000417217 199 ntBASIC3.98□□□□□ -1.77
CALR3Q96L12 RPL18P10-201ENST00000425606 538 ntBASIC3.98□□□□□ -1.77
CALR3Q96L12 TBCAP1-201ENST00000436520 327 ntBASIC3.98□□□□□ -1.77
CALR3Q96L12 AC008155.2-201ENST00000464337 397 ntBASIC3.98□□□□□ -1.77
CALR3Q96L12 RN7SL459P-201ENST00000481078 302 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms