Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 AC016717.2-201ENST00000609089 5141 ntBASIC1.96□□□□□ -2.1
RFT1Q96AA3 RNA5SP138-201ENST00000365098 114 ntBASIC1.96□□□□□ -2.1
RFT1Q96AA3 SNORA33.2-201ENST00000365413 134 ntBASIC1.96□□□□□ -2.1
RFT1Q96AA3 RNU6-1040P-201ENST00000383974 107 ntBASIC1.96□□□□□ -2.1
RFT1Q96AA3 Y_RNA.463-201ENST00000384271 102 ntBASIC1.96□□□□□ -2.1
RFT1Q96AA3 SNORD14D-201ENST00000384390 87 ntBASIC1.96□□□□□ -2.1
RFT1Q96AA3 RNU6-738P-201ENST00000384531 106 ntBASIC1.96□□□□□ -2.1
RFT1Q96AA3 MIR518A2-201ENST00000384966 87 ntBASIC1.96□□□□□ -2.1
RFT1Q96AA3 MIR29C-201ENST00000385231 88 ntBASIC1.96□□□□□ -2.1
RFT1Q96AA3 SNORA75.6-201ENST00000391318 127 ntBASIC1.96□□□□□ -2.1
RFT1Q96AA3 RN7SKP284-201ENST00000411002 343 ntBASIC1.96□□□□□ -2.1
RFT1Q96AA3 MRPS18CP6-201ENST00000423587 223 ntBASIC1.96□□□□□ -2.1
RFT1Q96AA3 MTND3P9-201ENST00000429526 346 ntBASIC1.96□□□□□ -2.1
RFT1Q96AA3 AL160004.2-201ENST00000432935 350 ntBASIC1.96□□□□□ -2.1
RFT1Q96AA3 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.96□□□□□ -2.1
RFT1Q96AA3 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.96□□□□□ -2.1
RFT1Q96AA3 RNU6-327P-201ENST00000516270 127 ntBASIC1.96□□□□□ -2.1
RFT1Q96AA3 RNU1-40P-201ENST00000516816 164 ntBASIC1.96□□□□□ -2.1
RFT1Q96AA3 RNU1-97P-201ENST00000516872 164 ntBASIC1.96□□□□□ -2.1
RFT1Q96AA3 Y_RNA.708-201ENST00000516950 96 ntBASIC1.96□□□□□ -2.1
RFT1Q96AA3 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.96□□□□□ -2.1
RFT1Q96AA3 MIR5690-201ENST00000583739 73 ntBASIC1.96□□□□□ -2.1
RFT1Q96AA3 AL158827.2-201ENST00000602494 330 ntBASIC1.96□□□□□ -2.1
RFT1Q96AA3 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.96□□□□□ -2.1
RFT1Q96AA3 PART1_1.1-201ENST00000611761 217 ntBASIC1.96□□□□□ -2.1
RFT1Q96AA3 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.96□□□□□ -2.1
RFT1Q96AA3 MIR6766-201ENST00000622641 72 ntBASIC1.96□□□□□ -2.1
RFT1Q96AA3 AC091932.3-201ENST00000624223 323 ntBASIC1.96□□□□□ -2.1
RFT1Q96AA3 AL691447.3-201ENST00000635020 330 ntBASIC1.96□□□□□ -2.1
RFT1Q96AA3 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
RFT1Q96AA3 Y_RNA.99-201ENST00000363138 105 ntBASIC1.95□□□□□ -2.1
RFT1Q96AA3 Y_RNA.112-201ENST00000363250 102 ntBASIC1.95□□□□□ -2.1
RFT1Q96AA3 U3.9-201ENST00000363823 204 ntBASIC1.95□□□□□ -2.1
RFT1Q96AA3 RNU6-593P-201ENST00000364716 112 ntBASIC1.95□□□□□ -2.1
RFT1Q96AA3 RNU6-26P-201ENST00000383985 107 ntBASIC1.95□□□□□ -2.1
RFT1Q96AA3 MIR676-201ENST00000390702 67 ntBASIC1.95□□□□□ -2.1
RFT1Q96AA3 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC1.95□□□□□ -2.1
RFT1Q96AA3 AC009963.1-201ENST00000417265 157 ntBASIC1.95□□□□□ -2.1
RFT1Q96AA3 AC012306.1-201ENST00000423267 114 ntBASIC1.95□□□□□ -2.1
RFT1Q96AA3 AC018865.2-201ENST00000423631 129 ntBASIC1.95□□□□□ -2.1
RFT1Q96AA3 AC245102.2-201ENST00000448956 180 ntBASIC1.95□□□□□ -2.1
RFT1Q96AA3 FO393415.2-201ENST00000480085 343 ntBASIC1.95□□□□□ -2.1
RFT1Q96AA3 RN7SL636P-201ENST00000497504 294 ntBASIC1.95□□□□□ -2.1
RFT1Q96AA3 AC021146.2-201ENST00000504736 556 ntBASIC1.95□□□□□ -2.1
RFT1Q96AA3 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.95□□□□□ -2.1
RFT1Q96AA3 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.95□□□□□ -2.1
RFT1Q96AA3 RNU6-699P-201ENST00000517081 110 ntBASIC1.95□□□□□ -2.1
RFT1Q96AA3 RNU1-54P-201ENST00000517181 120 ntBASIC1.95□□□□□ -2.1
RFT1Q96AA3 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.95□□□□□ -2.1
RFT1Q96AA3 SNRPGP18-201ENST00000553000 214 ntBASIC1.95□□□□□ -2.1
RFT1Q96AA3 AC006023.1-201ENST00000603944 259 ntBASIC1.95□□□□□ -2.1
RFT1Q96AA3 AC016925.2-201ENST00000605108 242 ntBASIC1.95□□□□□ -2.1
RFT1Q96AA3 MIR8076-201ENST00000611401 83 ntBASIC1.95□□□□□ -2.1
RFT1Q96AA3 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
RFT1Q96AA3 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
RFT1Q96AA3 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
RFT1Q96AA3 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.94□□□□□ -2.1
RFT1Q96AA3 MTND5P10-201ENST00000603719 1809 ntBASIC1.94□□□□□ -2.1
RFT1Q96AA3 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
RFT1Q96AA3 Y_RNA.28-201ENST00000362554 111 ntBASIC1.94□□□□□ -2.1
RFT1Q96AA3 RNU6-234P-201ENST00000365229 104 ntBASIC1.94□□□□□ -2.1
RFT1Q96AA3 RNA5SP338-201ENST00000410495 85 ntBASIC1.94□□□□□ -2.1
RFT1Q96AA3 MTND4P19-201ENST00000446659 478 ntBASIC1.94□□□□□ -2.1
RFT1Q96AA3 RPL23AP7-203ENST00000449021 469 ntBASIC1.94□□□□□ -2.1
RFT1Q96AA3 CHEK2P4-201ENST00000450340 246 ntBASIC1.94□□□□□ -2.1
RFT1Q96AA3 AL021397.1-201ENST00000451806 248 ntBASIC1.94□□□□□ -2.1
RFT1Q96AA3 AC025033.1-201ENST00000463883 194 ntBASIC1.94□□□□□ -2.1
RFT1Q96AA3 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC1.94□□□□□ -2.1
RFT1Q96AA3 AC022493.2-201ENST00000506122 481 ntBASIC1.94□□□□□ -2.1
RFT1Q96AA3 AC093259.1-201ENST00000509755 300 ntBASIC1.94□□□□□ -2.1
RFT1Q96AA3 RNA5SP24-201ENST00000516478 95 ntBASIC1.94□□□□□ -2.1
RFT1Q96AA3 RN7SKP295-201ENST00000517264 153 ntBASIC1.94□□□□□ -2.1
RFT1Q96AA3 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.94□□□□□ -2.1
RFT1Q96AA3 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.94□□□□□ -2.1
RFT1Q96AA3 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.94□□□□□ -2.1
RFT1Q96AA3 EIF4A1P12-201ENST00000551910 141 ntBASIC1.94□□□□□ -2.1
RFT1Q96AA3 AL442663.2-201ENST00000554385 511 ntBASIC1.94□□□□□ -2.1
RFT1Q96AA3 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.94□□□□□ -2.1
RFT1Q96AA3 AC109446.1-201ENST00000566172 220 ntBASIC1.94□□□□□ -2.1
RFT1Q96AA3 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.94□□□□□ -2.1
RFT1Q96AA3 AC005014.2-201ENST00000607795 599 ntBASIC1.94□□□□□ -2.1
RFT1Q96AA3 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.94□□□□□ -2.1
RFT1Q96AA3 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC1.94□□□□□ -2.1
RFT1Q96AA3 AC091925.1-201ENST00000623204 462 ntBASIC1.94□□□□□ -2.1
RFT1Q96AA3 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC1.94□□□□□ -2.1
RFT1Q96AA3 Y_RNA.2-201ENST00000362330 96 ntBASIC1.93□□□□□ -2.1
RFT1Q96AA3 Y_RNA.80-201ENST00000362996 102 ntBASIC1.93□□□□□ -2.1
RFT1Q96AA3 RNU5B-2P-201ENST00000363036 113 ntBASIC1.93□□□□□ -2.1
RFT1Q96AA3 RNU6-378P-201ENST00000384324 107 ntBASIC1.93□□□□□ -2.1
RFT1Q96AA3 Y_RNA.485-201ENST00000384395 102 ntBASIC1.93□□□□□ -2.1
RFT1Q96AA3 RNY1P14-201ENST00000384426 108 ntBASIC1.93□□□□□ -2.1
RFT1Q96AA3 RNU6-1160P-201ENST00000384546 104 ntBASIC1.93□□□□□ -2.1
RFT1Q96AA3 NDUFB4P4-201ENST00000404822 243 ntBASIC1.93□□□□□ -2.1
RFT1Q96AA3 AL357139.1-201ENST00000407792 426 ntBASIC1.93□□□□□ -2.1
RFT1Q96AA3 RNU6-174P-201ENST00000410406 106 ntBASIC1.93□□□□□ -2.1
RFT1Q96AA3 RNA5SP450-201ENST00000411206 102 ntBASIC1.93□□□□□ -2.1
RFT1Q96AA3 RPS26P42-201ENST00000413485 326 ntBASIC1.93□□□□□ -2.1
RFT1Q96AA3 MCFD2P1-201ENST00000417812 300 ntBASIC1.93□□□□□ -2.1
RFT1Q96AA3 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.93□□□□□ -2.1
RFT1Q96AA3 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms