Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 U8.12-201ENST00000384701 133 ntBASIC4.69□□□□□ -1.66
NKX2-3Q8TAU0 RNA5SP201-201ENST00000410316 124 ntBASIC4.69□□□□□ -1.66
NKX2-3Q8TAU0 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.69□□□□□ -1.66
NKX2-3Q8TAU0 RNU6-1282P-201ENST00000516735 96 ntBASIC4.69□□□□□ -1.66
NKX2-3Q8TAU0 RNU1-117P-201ENST00000517041 158 ntBASIC4.69□□□□□ -1.66
NKX2-3Q8TAU0 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.69□□□□□ -1.66
NKX2-3Q8TAU0 AL365205.2-201ENST00000594586 68 ntBASIC4.69□□□□□ -1.66
NKX2-3Q8TAU0 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.69□□□□□ -1.66
NKX2-3Q8TAU0 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC4.69□□□□□ -1.66
NKX2-3Q8TAU0 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.69□□□□□ -1.66
NKX2-3Q8TAU0 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.69□□□□□ -1.66
NKX2-3Q8TAU0 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.68□□□□□ -1.66
NKX2-3Q8TAU0 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
NKX2-3Q8TAU0 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.68□□□□□ -1.66
NKX2-3Q8TAU0 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
NKX2-3Q8TAU0 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
NKX2-3Q8TAU0 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.68□□□□□ -1.66
NKX2-3Q8TAU0 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.68□□□□□ -1.66
NKX2-3Q8TAU0 MIR873-201ENST00000401120 77 ntBASIC4.68□□□□□ -1.66
NKX2-3Q8TAU0 AL590004.2-201ENST00000404787 371 ntBASIC4.68□□□□□ -1.66
NKX2-3Q8TAU0 RNA5SP306-201ENST00000411087 107 ntBASIC4.68□□□□□ -1.66
NKX2-3Q8TAU0 AC083863.1-201ENST00000438811 231 ntBASIC4.68□□□□□ -1.66
NKX2-3Q8TAU0 AC107297.1-201ENST00000459991 176 ntBASIC4.68□□□□□ -1.66
NKX2-3Q8TAU0 AC005921.1-201ENST00000510589 286 ntBASIC4.68□□□□□ -1.66
NKX2-3Q8TAU0 RNU6-1337P-201ENST00000516525 95 ntBASIC4.68□□□□□ -1.66
NKX2-3Q8TAU0 RNU6-126P-201ENST00000516685 103 ntBASIC4.68□□□□□ -1.66
NKX2-3Q8TAU0 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.68□□□□□ -1.66
NKX2-3Q8TAU0 EIF4A1P12-201ENST00000551910 141 ntBASIC4.68□□□□□ -1.66
NKX2-3Q8TAU0 AC105245.1-201ENST00000581934 244 ntBASIC4.68□□□□□ -1.66
NKX2-3Q8TAU0 AL049861.1-201ENST00000603130 150 ntBASIC4.68□□□□□ -1.66
NKX2-3Q8TAU0 AC005972.2-201ENST00000604690 348 ntBASIC4.68□□□□□ -1.66
NKX2-3Q8TAU0 MIR7702-201ENST00000621931 59 ntBASIC4.68□□□□□ -1.66
NKX2-3Q8TAU0 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
NKX2-3Q8TAU0 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
NKX2-3Q8TAU0 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC4.68□□□□□ -1.66
NKX2-3Q8TAU0 AC007256.1-201ENST00000392253 2765 ntBASIC4.68□□□□□ -1.66
NKX2-3Q8TAU0 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
NKX2-3Q8TAU0 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
NKX2-3Q8TAU0 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.68□□□□□ -1.66
NKX2-3Q8TAU0 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC4.67□□□□□ -1.66
NKX2-3Q8TAU0 MIR302B-201ENST00000362188 73 ntBASIC4.67□□□□□ -1.66
NKX2-3Q8TAU0 Y_RNA.91-201ENST00000363042 107 ntBASIC4.67□□□□□ -1.66
NKX2-3Q8TAU0 Y_RNA.93-201ENST00000363066 109 ntBASIC4.67□□□□□ -1.66
NKX2-3Q8TAU0 RNA5SP189-201ENST00000364920 115 ntBASIC4.67□□□□□ -1.66
NKX2-3Q8TAU0 MIR183-201ENST00000384958 110 ntBASIC4.67□□□□□ -1.66
NKX2-3Q8TAU0 RNU2-32P-201ENST00000411193 191 ntBASIC4.67□□□□□ -1.66
NKX2-3Q8TAU0 AL591419.1-201ENST00000427423 339 ntBASIC4.67□□□□□ -1.66
NKX2-3Q8TAU0 AC027124.2-201ENST00000428249 105 ntBASIC4.67□□□□□ -1.66
NKX2-3Q8TAU0 PGBD4P5-201ENST00000445958 426 ntBASIC4.67□□□□□ -1.66
NKX2-3Q8TAU0 AP000873.1-201ENST00000463987 400 ntBASIC4.67□□□□□ -1.66
NKX2-3Q8TAU0 AC010531.2-201ENST00000465012 153 ntBASIC4.67□□□□□ -1.66
NKX2-3Q8TAU0 RPL29P14-201ENST00000495837 428 ntBASIC4.67□□□□□ -1.66
NKX2-3Q8TAU0 SNORD77.4-201ENST00000516158 81 ntBASIC4.67□□□□□ -1.66
NKX2-3Q8TAU0 RNA5SP236-201ENST00000516169 116 ntBASIC4.67□□□□□ -1.66
NKX2-3Q8TAU0 AC069240.1-201ENST00000548774 375 ntBASIC4.67□□□□□ -1.66
NKX2-3Q8TAU0 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.67□□□□□ -1.66
NKX2-3Q8TAU0 MIR5009-201ENST00000578736 100 ntBASIC4.67□□□□□ -1.66
NKX2-3Q8TAU0 MIR5006-201ENST00000583027 110 ntBASIC4.67□□□□□ -1.66
NKX2-3Q8TAU0 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.67□□□□□ -1.66
NKX2-3Q8TAU0 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.67□□□□□ -1.66
NKX2-3Q8TAU0 USP8P1-201ENST00000494673 3183 ntBASIC4.66□□□□□ -1.66
NKX2-3Q8TAU0 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.66□□□□□ -1.66
NKX2-3Q8TAU0 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NKX2-3Q8TAU0 SNORA31-201ENST00000362607 130 ntBASIC4.66□□□□□ -1.66
NKX2-3Q8TAU0 HMGN2P31-201ENST00000432430 273 ntBASIC4.66□□□□□ -1.66
NKX2-3Q8TAU0 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC4.66□□□□□ -1.66
NKX2-3Q8TAU0 AL451007.1-201ENST00000595491 289 ntBASIC4.66□□□□□ -1.66
NKX2-3Q8TAU0 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.66□□□□□ -1.66
NKX2-3Q8TAU0 SCARNA15.3-201ENST00000626315 122 ntBASIC4.66□□□□□ -1.66
NKX2-3Q8TAU0 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.66□□□□□ -1.66
NKX2-3Q8TAU0 SCARNA4.1-201ENST00000628597 123 ntBASIC4.66□□□□□ -1.66
NKX2-3Q8TAU0 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NKX2-3Q8TAU0 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.65□□□□□ -1.66
NKX2-3Q8TAU0 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
NKX2-3Q8TAU0 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.65□□□□□ -1.66
NKX2-3Q8TAU0 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.65□□□□□ -1.66
NKX2-3Q8TAU0 SCN1A-220ENST00000641603 12506 ntBASIC4.65□□□□□ -1.66
NKX2-3Q8TAU0 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
NKX2-3Q8TAU0 SNORA60-201ENST00000362396 134 ntBASIC4.65□□□□□ -1.67
NKX2-3Q8TAU0 RNY4P6-201ENST00000363667 96 ntBASIC4.65□□□□□ -1.67
NKX2-3Q8TAU0 Y_RNA.342-201ENST00000365352 113 ntBASIC4.65□□□□□ -1.67
NKX2-3Q8TAU0 SNORD116-13-201ENST00000384408 92 ntBASIC4.65□□□□□ -1.67
NKX2-3Q8TAU0 MIR30B-201ENST00000384850 88 ntBASIC4.65□□□□□ -1.67
NKX2-3Q8TAU0 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.65□□□□□ -1.67
NKX2-3Q8TAU0 RNU6-904P-201ENST00000516206 101 ntBASIC4.65□□□□□ -1.67
NKX2-3Q8TAU0 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC4.65□□□□□ -1.67
NKX2-3Q8TAU0 MIR4513-201ENST00000581077 86 ntBASIC4.65□□□□□ -1.67
NKX2-3Q8TAU0 AL034555.1-201ENST00000604816 211 ntBASIC4.65□□□□□ -1.67
NKX2-3Q8TAU0 AC005000.2-201ENST00000605468 310 ntBASIC4.65□□□□□ -1.67
NKX2-3Q8TAU0 U3.45-201ENST00000607547 219 ntBASIC4.65□□□□□ -1.67
NKX2-3Q8TAU0 uc_338.4-201ENST00000616635 176 ntBASIC4.65□□□□□ -1.67
NKX2-3Q8TAU0 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
NKX2-3Q8TAU0 AC011266.1-201ENST00000624119 3569 ntBASIC4.65□□□□□ -1.67
NKX2-3Q8TAU0 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
NKX2-3Q8TAU0 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.64□□□□□ -1.67
NKX2-3Q8TAU0 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
NKX2-3Q8TAU0 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
NKX2-3Q8TAU0 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
NKX2-3Q8TAU0 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
NKX2-3Q8TAU0 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms