Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 RBBP8P1-201ENST00000449447 1844 ntBASIC2.95□□□□□ -1.94
SLC44A3Q8N4M1 AL355596.1-201ENST00000565399 3996 ntBASIC2.95□□□□□ -1.94
SLC44A3Q8N4M1 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.95□□□□□ -1.94
SLC44A3Q8N4M1 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SLC44A3Q8N4M1 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.94□□□□□ -1.94
SLC44A3Q8N4M1 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SLC44A3Q8N4M1 Y_RNA.83-201ENST00000363005 113 ntBASIC2.94□□□□□ -1.94
SLC44A3Q8N4M1 RNU1-112P-201ENST00000364401 164 ntBASIC2.94□□□□□ -1.94
SLC44A3Q8N4M1 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
SLC44A3Q8N4M1 Y_RNA.446-201ENST00000384178 104 ntBASIC2.94□□□□□ -1.94
SLC44A3Q8N4M1 RNU6-541P-201ENST00000384709 110 ntBASIC2.94□□□□□ -1.94
SLC44A3Q8N4M1 MIR9-1-201ENST00000385198 89 ntBASIC2.94□□□□□ -1.94
SLC44A3Q8N4M1 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
SLC44A3Q8N4M1 RPL21P3-201ENST00000395517 478 ntBASIC2.94□□□□□ -1.94
SLC44A3Q8N4M1 AL591034.1-201ENST00000407447 340 ntBASIC2.94□□□□□ -1.94
SLC44A3Q8N4M1 RNA5SP390-201ENST00000410191 113 ntBASIC2.94□□□□□ -1.94
SLC44A3Q8N4M1 RNU5A-5P-201ENST00000411054 116 ntBASIC2.94□□□□□ -1.94
SLC44A3Q8N4M1 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.94□□□□□ -1.94
SLC44A3Q8N4M1 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.94□□□□□ -1.94
SLC44A3Q8N4M1 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.94□□□□□ -1.94
SLC44A3Q8N4M1 AC104332.1-201ENST00000440471 797 ntBASIC2.94□□□□□ -1.94
SLC44A3Q8N4M1 AL138752.1-201ENST00000452964 351 ntBASIC2.94□□□□□ -1.94
SLC44A3Q8N4M1 Y_RNA.644-201ENST00000459006 113 ntBASIC2.94□□□□□ -1.94
SLC44A3Q8N4M1 AC146507.2-201ENST00000460608 476 ntBASIC2.94□□□□□ -1.94
SLC44A3Q8N4M1 SNORA40.9-201ENST00000515895 93 ntBASIC2.94□□□□□ -1.94
SLC44A3Q8N4M1 RNU6-237P-201ENST00000515985 71 ntBASIC2.94□□□□□ -1.94
SLC44A3Q8N4M1 Y_RNA.674-201ENST00000516362 113 ntBASIC2.94□□□□□ -1.94
SLC44A3Q8N4M1 SNORA31.16-201ENST00000516773 139 ntBASIC2.94□□□□□ -1.94
SLC44A3Q8N4M1 RNU2-31P-201ENST00000516954 155 ntBASIC2.94□□□□□ -1.94
SLC44A3Q8N4M1 MIR3609-201ENST00000582661 80 ntBASIC2.94□□□□□ -1.94
SLC44A3Q8N4M1 AL359198.2-201ENST00000611836 194 ntBASIC2.94□□□□□ -1.94
SLC44A3Q8N4M1 AC068831.7-201ENST00000616954 363 ntBASIC2.94□□□□□ -1.94
SLC44A3Q8N4M1 AL590808.1-201ENST00000618696 141 ntBASIC2.94□□□□□ -1.94
SLC44A3Q8N4M1 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.94□□□□□ -1.94
SLC44A3Q8N4M1 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.94□□□□□ -1.94
SLC44A3Q8N4M1 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SLC44A3Q8N4M1 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
SLC44A3Q8N4M1 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.94□□□□□ -1.94
SLC44A3Q8N4M1 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
SLC44A3Q8N4M1 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
SLC44A3Q8N4M1 AL109809.4-201ENST00000603520 2185 ntBASIC2.93□□□□□ -1.94
SLC44A3Q8N4M1 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
SLC44A3Q8N4M1 RNU6-20P-201ENST00000384106 107 ntBASIC2.93□□□□□ -1.94
SLC44A3Q8N4M1 SNORA1.3-201ENST00000384676 136 ntBASIC2.93□□□□□ -1.94
SLC44A3Q8N4M1 RN7SKP123-201ENST00000410732 291 ntBASIC2.93□□□□□ -1.94
SLC44A3Q8N4M1 AC023141.4-201ENST00000412031 328 ntBASIC2.93□□□□□ -1.94
SLC44A3Q8N4M1 AL714022.1-201ENST00000439897 151 ntBASIC2.93□□□□□ -1.94
SLC44A3Q8N4M1 AC010095.1-201ENST00000443543 144 ntBASIC2.93□□□□□ -1.94
SLC44A3Q8N4M1 RNU7-120P-201ENST00000459334 63 ntBASIC2.93□□□□□ -1.94
SLC44A3Q8N4M1 AC091179.1-201ENST00000461606 579 ntBASIC2.93□□□□□ -1.94
SLC44A3Q8N4M1 SNRPGP7-201ENST00000469016 106 ntBASIC2.93□□□□□ -1.94
SLC44A3Q8N4M1 RNU6-1212P-201ENST00000517023 104 ntBASIC2.93□□□□□ -1.94
SLC44A3Q8N4M1 MIR4282-201ENST00000583613 67 ntBASIC2.93□□□□□ -1.94
SLC44A3Q8N4M1 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.93□□□□□ -1.94
SLC44A3Q8N4M1 AC006111.3-201ENST00000622137 383 ntBASIC2.93□□□□□ -1.94
SLC44A3Q8N4M1 AC073308.1-201ENST00000623696 305 ntBASIC2.93□□□□□ -1.94
SLC44A3Q8N4M1 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
SLC44A3Q8N4M1 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
SLC44A3Q8N4M1 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.93□□□□□ -1.94
SLC44A3Q8N4M1 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
SLC44A3Q8N4M1 AC010680.1-201ENST00000590024 3590 ntBASIC2.92□□□□□ -1.94
SLC44A3Q8N4M1 RNU6-859P-201ENST00000362728 107 ntBASIC2.92□□□□□ -1.94
SLC44A3Q8N4M1 RNU6-626P-201ENST00000363354 107 ntBASIC2.92□□□□□ -1.94
SLC44A3Q8N4M1 RNU6-799P-201ENST00000363567 107 ntBASIC2.92□□□□□ -1.94
SLC44A3Q8N4M1 RNU6-873P-201ENST00000363833 107 ntBASIC2.92□□□□□ -1.94
SLC44A3Q8N4M1 RNA5SP68-201ENST00000363885 119 ntBASIC2.92□□□□□ -1.94
SLC44A3Q8N4M1 Y_RNA.199-201ENST00000364014 102 ntBASIC2.92□□□□□ -1.94
SLC44A3Q8N4M1 Y_RNA.230-201ENST00000364348 109 ntBASIC2.92□□□□□ -1.94
SLC44A3Q8N4M1 Y_RNA.275-201ENST00000364726 110 ntBASIC2.92□□□□□ -1.94
SLC44A3Q8N4M1 RNU6-740P-201ENST00000364734 105 ntBASIC2.92□□□□□ -1.94
SLC44A3Q8N4M1 RNY4P28-201ENST00000365281 93 ntBASIC2.92□□□□□ -1.94
SLC44A3Q8N4M1 Y_RNA.418-201ENST00000384029 102 ntBASIC2.92□□□□□ -1.94
SLC44A3Q8N4M1 SNORA70B-201ENST00000384210 135 ntBASIC2.92□□□□□ -1.94
SLC44A3Q8N4M1 MIR887-201ENST00000401258 79 ntBASIC2.92□□□□□ -1.94
SLC44A3Q8N4M1 AL138827.1-201ENST00000402666 306 ntBASIC2.92□□□□□ -1.94
SLC44A3Q8N4M1 MIR548M-201ENST00000408260 86 ntBASIC2.92□□□□□ -1.94
SLC44A3Q8N4M1 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.92□□□□□ -1.94
SLC44A3Q8N4M1 RNU6-651P-201ENST00000411040 105 ntBASIC2.92□□□□□ -1.94
SLC44A3Q8N4M1 CYCSP48-201ENST00000417124 323 ntBASIC2.92□□□□□ -1.94
SLC44A3Q8N4M1 AC112220.1-201ENST00000434628 355 ntBASIC2.92□□□□□ -1.94
SLC44A3Q8N4M1 RPL39P29-201ENST00000447779 157 ntBASIC2.92□□□□□ -1.94
SLC44A3Q8N4M1 AC007395.1-201ENST00000451333 677 ntBASIC2.92□□□□□ -1.94
SLC44A3Q8N4M1 COX6CP14-201ENST00000469580 174 ntBASIC2.92□□□□□ -1.94
SLC44A3Q8N4M1 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.92□□□□□ -1.94
SLC44A3Q8N4M1 AC008413.1-201ENST00000511864 177 ntBASIC2.92□□□□□ -1.94
SLC44A3Q8N4M1 SNORD116-28-201ENST00000516123 91 ntBASIC2.92□□□□□ -1.94
SLC44A3Q8N4M1 AC055872.1-201ENST00000570978 278 ntBASIC2.92□□□□□ -1.94
SLC44A3Q8N4M1 AL138963.2-201ENST00000605137 226 ntBASIC2.92□□□□□ -1.94
SLC44A3Q8N4M1 GABRG2-229ENST00000641017 3628 ntBASIC2.92□□□□□ -1.94
SLC44A3Q8N4M1 AP003122.5-201ENST00000527668 3766 ntBASIC2.92□□□□□ -1.94
SLC44A3Q8N4M1 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.92□□□□□ -1.94
SLC44A3Q8N4M1 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
SLC44A3Q8N4M1 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SLC44A3Q8N4M1 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SLC44A3Q8N4M1 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
SLC44A3Q8N4M1 UBE2WP1-201ENST00000362030 340 ntBASIC2.91□□□□□ -1.94
SLC44A3Q8N4M1 Y_RNA.136-201ENST00000363444 102 ntBASIC2.91□□□□□ -1.94
SLC44A3Q8N4M1 RNU6-682P-201ENST00000363843 106 ntBASIC2.91□□□□□ -1.94
SLC44A3Q8N4M1 Y_RNA.270-201ENST00000364693 104 ntBASIC2.91□□□□□ -1.94
SLC44A3Q8N4M1 Y_RNA.569-201ENST00000384749 103 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 150.6 ms