Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.79□□□□□ -1.8
USP48Q86UV5 PRELID3BP1-201ENST00000457142 540 ntBASIC3.79□□□□□ -1.8
USP48Q86UV5 AC145146.1-201ENST00000496370 254 ntBASIC3.79□□□□□ -1.8
USP48Q86UV5 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.79□□□□□ -1.8
USP48Q86UV5 RNU6-496P-201ENST00000516145 99 ntBASIC3.79□□□□□ -1.8
USP48Q86UV5 Y_RNA.683-201ENST00000516508 93 ntBASIC3.79□□□□□ -1.8
USP48Q86UV5 Y_RNA.700-201ENST00000516806 100 ntBASIC3.79□□□□□ -1.8
USP48Q86UV5 RNU6-182P-201ENST00000516970 105 ntBASIC3.79□□□□□ -1.8
USP48Q86UV5 EIF4A1P12-201ENST00000551910 141 ntBASIC3.79□□□□□ -1.8
USP48Q86UV5 AC004792.1-201ENST00000614523 137 ntBASIC3.79□□□□□ -1.8
USP48Q86UV5 IGHVIII-44-202ENST00000636235 289 ntBASIC3.79□□□□□ -1.8
USP48Q86UV5 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
USP48Q86UV5 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
USP48Q86UV5 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.79□□□□□ -1.8
USP48Q86UV5 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
USP48Q86UV5 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.78□□□□□ -1.8
USP48Q86UV5 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.78□□□□□ -1.8
USP48Q86UV5 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
USP48Q86UV5 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
USP48Q86UV5 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
USP48Q86UV5 RNU6-486P-201ENST00000363116 107 ntBASIC3.78□□□□□ -1.8
USP48Q86UV5 U3.9-201ENST00000363823 204 ntBASIC3.78□□□□□ -1.8
USP48Q86UV5 Y_RNA.179-201ENST00000363844 90 ntBASIC3.78□□□□□ -1.8
USP48Q86UV5 RPL21P3-201ENST00000395517 478 ntBASIC3.78□□□□□ -1.8
USP48Q86UV5 AL512633.1-201ENST00000399931 655 ntBASIC3.78□□□□□ -1.8
USP48Q86UV5 RN7SKP220-201ENST00000410611 288 ntBASIC3.78□□□□□ -1.8
USP48Q86UV5 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.78□□□□□ -1.8
USP48Q86UV5 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.78□□□□□ -1.8
USP48Q86UV5 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.78□□□□□ -1.8
USP48Q86UV5 AC010095.1-201ENST00000443543 144 ntBASIC3.78□□□□□ -1.8
USP48Q86UV5 AC146507.2-201ENST00000460608 476 ntBASIC3.78□□□□□ -1.8
USP48Q86UV5 RPL31P41-201ENST00000477967 372 ntBASIC3.78□□□□□ -1.8
USP48Q86UV5 AC103975.1-201ENST00000482506 483 ntBASIC3.78□□□□□ -1.8
USP48Q86UV5 RN7SKP132-201ENST00000516001 208 ntBASIC3.78□□□□□ -1.8
USP48Q86UV5 CYCSP23-201ENST00000519781 313 ntBASIC3.78□□□□□ -1.8
USP48Q86UV5 AC027176.1-201ENST00000560204 514 ntBASIC3.78□□□□□ -1.8
USP48Q86UV5 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.78□□□□□ -1.8
USP48Q86UV5 AL670379.2-201ENST00000604983 252 ntBASIC3.78□□□□□ -1.8
USP48Q86UV5 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.78□□□□□ -1.8
USP48Q86UV5 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.78□□□□□ -1.8
USP48Q86UV5 AC069528.2-201ENST00000624849 1991 ntBASIC3.78□□□□□ -1.8
USP48Q86UV5 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.78□□□□□ -1.81
USP48Q86UV5 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
USP48Q86UV5 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
USP48Q86UV5 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
USP48Q86UV5 RNU4-82P-201ENST00000362443 140 ntBASIC3.77□□□□□ -1.81
USP48Q86UV5 RNU6-1266P-201ENST00000362794 105 ntBASIC3.77□□□□□ -1.81
USP48Q86UV5 Y_RNA.150-201ENST00000363562 102 ntBASIC3.77□□□□□ -1.81
USP48Q86UV5 Y_RNA.180-201ENST00000363867 113 ntBASIC3.77□□□□□ -1.81
USP48Q86UV5 RNA5SP229-201ENST00000410809 99 ntBASIC3.77□□□□□ -1.81
USP48Q86UV5 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.77□□□□□ -1.81
USP48Q86UV5 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.77□□□□□ -1.81
USP48Q86UV5 AC007395.1-201ENST00000451333 677 ntBASIC3.77□□□□□ -1.81
USP48Q86UV5 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.77□□□□□ -1.81
USP48Q86UV5 HSPE1P25-201ENST00000455484 251 ntBASIC3.77□□□□□ -1.81
USP48Q86UV5 RPS29P26-201ENST00000477483 171 ntBASIC3.77□□□□□ -1.81
USP48Q86UV5 RNA5SP367-201ENST00000516557 118 ntBASIC3.77□□□□□ -1.81
USP48Q86UV5 SCARNA24.2-201ENST00000516968 130 ntBASIC3.77□□□□□ -1.81
USP48Q86UV5 ELOCP29-201ENST00000588193 334 ntBASIC3.77□□□□□ -1.81
USP48Q86UV5 AC092435.3-201ENST00000565538 3654 ntBASIC3.77□□□□□ -1.81
USP48Q86UV5 AP003122.5-201ENST00000527668 3766 ntBASIC3.77□□□□□ -1.81
USP48Q86UV5 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
USP48Q86UV5 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
USP48Q86UV5 AC093831.2-201ENST00000624393 3427 ntBASIC3.76□□□□□ -1.81
USP48Q86UV5 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.76□□□□□ -1.81
USP48Q86UV5 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
USP48Q86UV5 snoU2_19.1-201ENST00000362361 80 ntBASIC3.76□□□□□ -1.81
USP48Q86UV5 SNORD113-8-201ENST00000363497 74 ntBASIC3.76□□□□□ -1.81
USP48Q86UV5 Y_RNA.297-201ENST00000364950 91 ntBASIC3.76□□□□□ -1.81
USP48Q86UV5 RNU6-793P-201ENST00000384233 104 ntBASIC3.76□□□□□ -1.81
USP48Q86UV5 SNORD63-201ENST00000384262 68 ntBASIC3.76□□□□□ -1.81
USP48Q86UV5 MIR549A-201ENST00000385268 96 ntBASIC3.76□□□□□ -1.81
USP48Q86UV5 SNORA46.1-201ENST00000391069 153 ntBASIC3.76□□□□□ -1.81
USP48Q86UV5 PCNPP3-201ENST00000393579 471 ntBASIC3.76□□□□□ -1.81
USP48Q86UV5 Y_RNA.602-201ENST00000410535 92 ntBASIC3.76□□□□□ -1.81
USP48Q86UV5 AL139132.1-201ENST00000431587 344 ntBASIC3.76□□□□□ -1.81
USP48Q86UV5 AC108938.1-201ENST00000451204 136 ntBASIC3.76□□□□□ -1.81
USP48Q86UV5 RPL26P26-201ENST00000480251 434 ntBASIC3.76□□□□□ -1.81
USP48Q86UV5 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.76□□□□□ -1.81
USP48Q86UV5 SNORA40.9-201ENST00000515895 93 ntBASIC3.76□□□□□ -1.81
USP48Q86UV5 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.76□□□□□ -1.81
USP48Q86UV5 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.76□□□□□ -1.81
USP48Q86UV5 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.76□□□□□ -1.81
USP48Q86UV5 MTND5P35-201ENST00000557537 1720 ntBASIC3.75□□□□□ -1.81
USP48Q86UV5 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.75□□□□□ -1.81
USP48Q86UV5 Y_RNA.54-201ENST00000362766 105 ntBASIC3.75□□□□□ -1.81
USP48Q86UV5 RPL32P35-201ENST00000415214 394 ntBASIC3.75□□□□□ -1.81
USP48Q86UV5 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.75□□□□□ -1.81
USP48Q86UV5 AC005002.2-201ENST00000438228 269 ntBASIC3.75□□□□□ -1.81
USP48Q86UV5 AL135938.1-201ENST00000443141 297 ntBASIC3.75□□□□□ -1.81
USP48Q86UV5 AC006483.1-201ENST00000487308 313 ntBASIC3.75□□□□□ -1.81
USP48Q86UV5 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.75□□□□□ -1.81
USP48Q86UV5 RNU4-71P-201ENST00000516258 113 ntBASIC3.75□□□□□ -1.81
USP48Q86UV5 RNU6-406P-201ENST00000516470 107 ntBASIC3.75□□□□□ -1.81
USP48Q86UV5 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.75□□□□□ -1.81
USP48Q86UV5 MIR4319-201ENST00000577285 85 ntBASIC3.75□□□□□ -1.81
USP48Q86UV5 AC008739.2-201ENST00000597006 317 ntBASIC3.75□□□□□ -1.81
USP48Q86UV5 RPL30P11-203ENST00000598995 310 ntBASIC3.75□□□□□ -1.81
USP48Q86UV5 BX284668.6-201ENST00000606899 438 ntBASIC3.75□□□□□ -1.81
USP48Q86UV5 Y_RNA.29-201ENST00000362570 113 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms