Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 AL136164.4-201ENST00000625013 2135 ntBASIC3.97□□□□□ -1.77
PRPF40BQ6NWY9 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
PRPF40BQ6NWY9 RNU1-62P-201ENST00000362599 164 ntBASIC3.97□□□□□ -1.77
PRPF40BQ6NWY9 Y_RNA.262-201ENST00000364641 102 ntBASIC3.97□□□□□ -1.77
PRPF40BQ6NWY9 RNA5SP475-201ENST00000410568 110 ntBASIC3.97□□□□□ -1.77
PRPF40BQ6NWY9 AC023141.4-201ENST00000412031 328 ntBASIC3.97□□□□□ -1.77
PRPF40BQ6NWY9 HMGN1P18-201ENST00000457642 277 ntBASIC3.97□□□□□ -1.77
PRPF40BQ6NWY9 SNRPGP3-201ENST00000469405 227 ntBASIC3.97□□□□□ -1.77
PRPF40BQ6NWY9 RNA5SP356-201ENST00000515972 94 ntBASIC3.97□□□□□ -1.77
PRPF40BQ6NWY9 RNU6-107P-201ENST00000516643 102 ntBASIC3.97□□□□□ -1.77
PRPF40BQ6NWY9 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.97□□□□□ -1.77
PRPF40BQ6NWY9 RNU6-91P-201ENST00000607774 107 ntBASIC3.97□□□□□ -1.77
PRPF40BQ6NWY9 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.97□□□□□ -1.77
PRPF40BQ6NWY9 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC3.97□□□□□ -1.77
PRPF40BQ6NWY9 MIR3674-201ENST00000636576 68 ntBASIC3.97□□□□□ -1.77
PRPF40BQ6NWY9 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PRPF40BQ6NWY9 AC010680.1-201ENST00000590024 3590 ntBASIC3.97□□□□□ -1.77
PRPF40BQ6NWY9 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
PRPF40BQ6NWY9 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.96□□□□□ -1.77
PRPF40BQ6NWY9 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC3.96□□□□□ -1.78
PRPF40BQ6NWY9 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
PRPF40BQ6NWY9 RNA5SP295-201ENST00000362655 121 ntBASIC3.96□□□□□ -1.78
PRPF40BQ6NWY9 SNORD114-19-201ENST00000363072 75 ntBASIC3.96□□□□□ -1.78
PRPF40BQ6NWY9 Y_RNA.101-201ENST00000363154 102 ntBASIC3.96□□□□□ -1.78
PRPF40BQ6NWY9 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.96□□□□□ -1.78
PRPF40BQ6NWY9 AC091021.1-201ENST00000468051 388 ntBASIC3.96□□□□□ -1.78
PRPF40BQ6NWY9 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.96□□□□□ -1.78
PRPF40BQ6NWY9 SNORA70.14-201ENST00000516205 110 ntBASIC3.96□□□□□ -1.78
PRPF40BQ6NWY9 RNY3P16-201ENST00000516338 101 ntBASIC3.96□□□□□ -1.78
PRPF40BQ6NWY9 MIR3186-201ENST00000577404 85 ntBASIC3.96□□□□□ -1.78
PRPF40BQ6NWY9 AC006380.1-201ENST00000603598 186 ntBASIC3.96□□□□□ -1.78
PRPF40BQ6NWY9 U6.106-201ENST00000636360 105 ntBASIC3.96□□□□□ -1.78
PRPF40BQ6NWY9 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC3.96□□□□□ -1.78
PRPF40BQ6NWY9 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PRPF40BQ6NWY9 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.96□□□□□ -1.78
PRPF40BQ6NWY9 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.96□□□□□ -1.78
PRPF40BQ6NWY9 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PRPF40BQ6NWY9 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
PRPF40BQ6NWY9 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PRPF40BQ6NWY9 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.95□□□□□ -1.78
PRPF40BQ6NWY9 RNU6-1248P-201ENST00000391096 64 ntBASIC3.95□□□□□ -1.78
PRPF40BQ6NWY9 RNU6-918P-201ENST00000391219 106 ntBASIC3.95□□□□□ -1.78
PRPF40BQ6NWY9 RN7SKP51-201ENST00000410781 304 ntBASIC3.95□□□□□ -1.78
PRPF40BQ6NWY9 RNA5SP229-201ENST00000410809 99 ntBASIC3.95□□□□□ -1.78
PRPF40BQ6NWY9 ELOCP21-201ENST00000412558 336 ntBASIC3.95□□□□□ -1.78
PRPF40BQ6NWY9 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.95□□□□□ -1.78
PRPF40BQ6NWY9 MIR3162-201ENST00000581818 82 ntBASIC3.95□□□□□ -1.78
PRPF40BQ6NWY9 AC013412.1-201ENST00000610687 192 ntBASIC3.95□□□□□ -1.78
PRPF40BQ6NWY9 uc_338.1-201ENST00000612113 180 ntBASIC3.95□□□□□ -1.78
PRPF40BQ6NWY9 AC005520.5-201ENST00000613926 164 ntBASIC3.95□□□□□ -1.78
PRPF40BQ6NWY9 AC021753.1-201ENST00000635724 168 ntBASIC3.95□□□□□ -1.78
PRPF40BQ6NWY9 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
PRPF40BQ6NWY9 AC010889.1-201ENST00000566193 2666 ntBASIC3.95□□□□□ -1.78
PRPF40BQ6NWY9 AL353746.1-201ENST00000566293 6881 ntBASIC3.95□□□□□ -1.78
PRPF40BQ6NWY9 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
PRPF40BQ6NWY9 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.95□□□□□ -1.78
PRPF40BQ6NWY9 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
PRPF40BQ6NWY9 RNU1-75P-201ENST00000347264 129 ntBASIC3.94□□□□□ -1.78
PRPF40BQ6NWY9 RNA5SP432-201ENST00000362480 116 ntBASIC3.94□□□□□ -1.78
PRPF40BQ6NWY9 Y_RNA.217-201ENST00000364214 105 ntBASIC3.94□□□□□ -1.78
PRPF40BQ6NWY9 SNORA40.19-201ENST00000390846 128 ntBASIC3.94□□□□□ -1.78
PRPF40BQ6NWY9 TMSB4XP3-201ENST00000445144 114 ntBASIC3.94□□□□□ -1.78
PRPF40BQ6NWY9 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.94□□□□□ -1.78
PRPF40BQ6NWY9 HMGN2P7-201ENST00000456186 273 ntBASIC3.94□□□□□ -1.78
PRPF40BQ6NWY9 Y_RNA.641-201ENST00000459414 105 ntBASIC3.94□□□□□ -1.78
PRPF40BQ6NWY9 AC091826.1-201ENST00000514065 313 ntBASIC3.94□□□□□ -1.78
PRPF40BQ6NWY9 RNU6-191P-201ENST00000516295 94 ntBASIC3.94□□□□□ -1.78
PRPF40BQ6NWY9 RNU6-966P-201ENST00000516479 104 ntBASIC3.94□□□□□ -1.78
PRPF40BQ6NWY9 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PRPF40BQ6NWY9 GTF3AP2-201ENST00000557014 266 ntBASIC3.94□□□□□ -1.78
PRPF40BQ6NWY9 DEFB117-201ENST00000602356 141 ntBASIC3.94□□□□□ -1.78
PRPF40BQ6NWY9 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.94□□□□□ -1.78
PRPF40BQ6NWY9 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
PRPF40BQ6NWY9 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PRPF40BQ6NWY9 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PRPF40BQ6NWY9 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PRPF40BQ6NWY9 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PRPF40BQ6NWY9 Y_RNA.8-201ENST00000362353 102 ntBASIC3.93□□□□□ -1.78
PRPF40BQ6NWY9 RNU6-1010P-201ENST00000362757 107 ntBASIC3.93□□□□□ -1.78
PRPF40BQ6NWY9 RNU6-324P-201ENST00000363957 106 ntBASIC3.93□□□□□ -1.78
PRPF40BQ6NWY9 Y_RNA.240-201ENST00000364469 95 ntBASIC3.93□□□□□ -1.78
PRPF40BQ6NWY9 RNU2-54P-201ENST00000410299 190 ntBASIC3.93□□□□□ -1.78
PRPF40BQ6NWY9 AC096649.2-201ENST00000416186 393 ntBASIC3.93□□□□□ -1.78
PRPF40BQ6NWY9 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.93□□□□□ -1.78
PRPF40BQ6NWY9 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.93□□□□□ -1.78
PRPF40BQ6NWY9 RN7SL442P-201ENST00000473804 320 ntBASIC3.93□□□□□ -1.78
PRPF40BQ6NWY9 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.93□□□□□ -1.78
PRPF40BQ6NWY9 TRAPPC2P7-201ENST00000509650 231 ntBASIC3.93□□□□□ -1.78
PRPF40BQ6NWY9 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.93□□□□□ -1.78
PRPF40BQ6NWY9 AC012531.5-201ENST00000611375 151 ntBASIC3.93□□□□□ -1.78
PRPF40BQ6NWY9 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.93□□□□□ -1.78
PRPF40BQ6NWY9 AC132825.6-201ENST00000638861 357 ntBASIC3.93□□□□□ -1.78
PRPF40BQ6NWY9 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.93□□□□□ -1.78
PRPF40BQ6NWY9 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PRPF40BQ6NWY9 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
PRPF40BQ6NWY9 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PRPF40BQ6NWY9 Y_RNA.170-201ENST00000363746 110 ntBASIC3.92□□□□□ -1.78
PRPF40BQ6NWY9 Y_RNA.304-201ENST00000365011 112 ntBASIC3.92□□□□□ -1.78
PRPF40BQ6NWY9 RNU6-211P-201ENST00000384047 107 ntBASIC3.92□□□□□ -1.78
PRPF40BQ6NWY9 MTCO2P33-201ENST00000402100 465 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms