Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 AC013470.1-201ENST00000453438 462 ntBASIC0.2□□□□□ -2.38
CACNA1EQ15878 snoU13.21-201ENST00000459368 105 ntBASIC0.2□□□□□ -2.38
CACNA1EQ15878 RAP1BP2-201ENST00000478270 544 ntBASIC0.2□□□□□ -2.38
CACNA1EQ15878 AP000797.1-201ENST00000478870 387 ntBASIC0.2□□□□□ -2.38
CACNA1EQ15878 AC104629.1-201ENST00000494226 508 ntBASIC0.2□□□□□ -2.38
CACNA1EQ15878 AC015911.1-201ENST00000495111 156 ntBASIC0.2□□□□□ -2.38
CACNA1EQ15878 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC0.2□□□□□ -2.38
CACNA1EQ15878 TRBVA-201ENST00000498804 316 ntBASIC0.2□□□□□ -2.38
CACNA1EQ15878 AC114981.1-201ENST00000503897 678 ntBASIC0.2□□□□□ -2.38
CACNA1EQ15878 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC0.2□□□□□ -2.38
CACNA1EQ15878 MTCO3P7-201ENST00000510008 774 ntBASIC0.2□□□□□ -2.38
CACNA1EQ15878 AC079140.3-201ENST00000511111 550 ntBASIC0.2□□□□□ -2.38
CACNA1EQ15878 RNU6-922P-201ENST00000516753 99 ntBASIC0.2□□□□□ -2.38
CACNA1EQ15878 SNORA18.6-201ENST00000516792 115 ntBASIC0.2□□□□□ -2.38
CACNA1EQ15878 SNORD60.2-201ENST00000516883 86 ntBASIC0.2□□□□□ -2.38
CACNA1EQ15878 AP000763.2-201ENST00000540641 163 ntBASIC0.2□□□□□ -2.38
CACNA1EQ15878 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC0.2□□□□□ -2.38
CACNA1EQ15878 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.2□□□□□ -2.38
CACNA1EQ15878 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.2□□□□□ -2.38
CACNA1EQ15878 SNORD3E-202ENST00000627253 216 ntBASIC0.2□□□□□ -2.38
CACNA1EQ15878 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC0.2□□□□□ -2.38
CACNA1EQ15878 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
CACNA1EQ15878 RNU6-1237P-201ENST00000384777 107 ntBASIC0.19□□□□□ -2.38
CACNA1EQ15878 MIR520A-201ENST00000384862 85 ntBASIC0.19□□□□□ -2.38
CACNA1EQ15878 MIR604-201ENST00000384880 94 ntBASIC0.19□□□□□ -2.38
CACNA1EQ15878 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.19□□□□□ -2.38
CACNA1EQ15878 MTCO1P21-201ENST00000416634 589 ntBASIC0.19□□□□□ -2.38
CACNA1EQ15878 AL353777.1-201ENST00000425552 326 ntBASIC0.19□□□□□ -2.38
CACNA1EQ15878 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.19□□□□□ -2.38
CACNA1EQ15878 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC0.19□□□□□ -2.38
CACNA1EQ15878 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC0.19□□□□□ -2.38
CACNA1EQ15878 MTND5P2-201ENST00000442927 1142 ntBASIC0.19□□□□□ -2.38
CACNA1EQ15878 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.19□□□□□ -2.38
CACNA1EQ15878 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC0.19□□□□□ -2.38
CACNA1EQ15878 AC006026.2-201ENST00000457376 180 ntBASIC0.19□□□□□ -2.38
CACNA1EQ15878 AC104982.1-201ENST00000478775 574 ntBASIC0.19□□□□□ -2.38
CACNA1EQ15878 RNA5SP454-201ENST00000517231 127 ntBASIC0.19□□□□□ -2.38
CACNA1EQ15878 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC0.19□□□□□ -2.38
CACNA1EQ15878 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.19□□□□□ -2.38
CACNA1EQ15878 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.19□□□□□ -2.38
CACNA1EQ15878 AC091489.2-201ENST00000566263 604 ntBASIC0.19□□□□□ -2.38
CACNA1EQ15878 AC110760.3-201ENST00000598794 467 ntBASIC0.19□□□□□ -2.38
CACNA1EQ15878 AC004987.4-201ENST00000603383 338 ntBASIC0.19□□□□□ -2.38
CACNA1EQ15878 Z83818.1-201ENST00000603584 150 ntBASIC0.19□□□□□ -2.38
CACNA1EQ15878 AC107304.1-201ENST00000604229 296 ntBASIC0.19□□□□□ -2.38
CACNA1EQ15878 AC002044.1-201ENST00000606707 158 ntBASIC0.19□□□□□ -2.38
CACNA1EQ15878 AL158211.2-201ENST00000607282 395 ntBASIC0.19□□□□□ -2.38
CACNA1EQ15878 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC0.19□□□□□ -2.38
CACNA1EQ15878 U6.42-201ENST00000618440 107 ntBASIC0.19□□□□□ -2.38
CACNA1EQ15878 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.19□□□□□ -2.38
CACNA1EQ15878 7SK.10-201ENST00000621414 298 ntBASIC0.19□□□□□ -2.38
CACNA1EQ15878 Y_RNA.22-201ENST00000362492 102 ntBASIC0.19□□□□□ -2.38
CACNA1EQ15878 SNORA63D-201ENST00000364359 132 ntBASIC0.19□□□□□ -2.38
CACNA1EQ15878 Y_RNA.358-201ENST00000365491 99 ntBASIC0.19□□□□□ -2.38
CACNA1EQ15878 RNU4-48P-201ENST00000365559 182 ntBASIC0.19□□□□□ -2.38
CACNA1EQ15878 RNU6-1242P-201ENST00000391052 103 ntBASIC0.19□□□□□ -2.38
CACNA1EQ15878 ELOCP17-201ENST00000414751 326 ntBASIC0.19□□□□□ -2.38
CACNA1EQ15878 ELOCP9-201ENST00000418624 239 ntBASIC0.19□□□□□ -2.38
CACNA1EQ15878 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.19□□□□□ -2.38
CACNA1EQ15878 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.19□□□□□ -2.38
CACNA1EQ15878 PCNPP5-201ENST00000452246 481 ntBASIC0.19□□□□□ -2.38
CACNA1EQ15878 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.19□□□□□ -2.38
CACNA1EQ15878 SNORA43.2-201ENST00000516652 128 ntBASIC0.19□□□□□ -2.38
CACNA1EQ15878 MRPS36P4-201ENST00000534436 298 ntBASIC0.19□□□□□ -2.38
CACNA1EQ15878 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.19□□□□□ -2.38
CACNA1EQ15878 BNIP3P6-201ENST00000549284 499 ntBASIC0.19□□□□□ -2.38
CACNA1EQ15878 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC0.19□□□□□ -2.38
CACNA1EQ15878 MTND4P33-201ENST00000556706 766 ntBASIC0.19□□□□□ -2.38
CACNA1EQ15878 AL391840.1-201ENST00000571144 367 ntBASIC0.19□□□□□ -2.38
CACNA1EQ15878 Y_RNA.757-201ENST00000578934 114 ntBASIC0.19□□□□□ -2.38
CACNA1EQ15878 AC008088.1-201ENST00000580993 280 ntBASIC0.19□□□□□ -2.38
CACNA1EQ15878 MTCO2P2-201ENST00000591258 225 ntBASIC0.19□□□□□ -2.38
CACNA1EQ15878 AC068790.6-201ENST00000602558 258 ntBASIC0.19□□□□□ -2.38
CACNA1EQ15878 AP000240.1-201ENST00000609910 452 ntBASIC0.19□□□□□ -2.38
CACNA1EQ15878 HULC.1-201ENST00000612720 240 ntBASIC0.19□□□□□ -2.38
CACNA1EQ15878 AL139418.1-201ENST00000613613 177 ntBASIC0.19□□□□□ -2.38
CACNA1EQ15878 AC010608.3-201ENST00000625048 527 ntBASIC0.19□□□□□ -2.38
CACNA1EQ15878 snoZ196.1-201ENST00000625269 89 ntBASIC0.19□□□□□ -2.38
CACNA1EQ15878 UGP2-231ENST00000627474 264 ntTSL 5 BASIC0.19□□□□□ -2.38
CACNA1EQ15878 RNA5SP361-201ENST00000362686 118 ntBASIC0.18□□□□□ -2.38
CACNA1EQ15878 Y_RNA.65-201ENST00000362846 100 ntBASIC0.18□□□□□ -2.38
CACNA1EQ15878 SNORD68-201ENST00000363214 84 ntBASIC0.18□□□□□ -2.38
CACNA1EQ15878 SNORA36.2-201ENST00000384004 127 ntBASIC0.18□□□□□ -2.38
CACNA1EQ15878 MIR19A-201ENST00000384878 82 ntBASIC0.18□□□□□ -2.38
CACNA1EQ15878 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC0.18□□□□□ -2.38
CACNA1EQ15878 MTND4P20-201ENST00000424125 869 ntBASIC0.18□□□□□ -2.38
CACNA1EQ15878 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.18□□□□□ -2.38
CACNA1EQ15878 HSFY7P-201ENST00000432672 318 ntBASIC0.18□□□□□ -2.38
CACNA1EQ15878 HSFY8P-201ENST00000437934 318 ntBASIC0.18□□□□□ -2.38
CACNA1EQ15878 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC0.18□□□□□ -2.38
CACNA1EQ15878 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC0.18□□□□□ -2.38
CACNA1EQ15878 LINC01399-202ENST00000458450 244 ntBASIC0.18□□□□□ -2.38
CACNA1EQ15878 RPL37P6-201ENST00000460682 294 ntBASIC0.18□□□□□ -2.38
CACNA1EQ15878 RPL23AP54-201ENST00000495129 419 ntBASIC0.18□□□□□ -2.38
CACNA1EQ15878 RPL39P5-202ENST00000512505 151 ntBASIC0.18□□□□□ -2.38
CACNA1EQ15878 RNU2-46P-201ENST00000517038 113 ntBASIC0.18□□□□□ -2.38
CACNA1EQ15878 MIR4742-201ENST00000581069 85 ntBASIC0.18□□□□□ -2.38
CACNA1EQ15878 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC0.18□□□□□ -2.38
CACNA1EQ15878 AC009994.1-201ENST00000606889 253 ntBASIC0.18□□□□□ -2.38
CACNA1EQ15878 AC097065.2-201ENST00000608159 533 ntBASIC0.18□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms