Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
CHMP4BP1P59074 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
CHMP4BP1P59074 UBE2WP1-201ENST00000362030 340 ntBASIC3.7□□□□□ -1.82
CHMP4BP1P59074 MIR148B-201ENST00000362252 99 ntBASIC3.7□□□□□ -1.82
CHMP4BP1P59074 MIR422A-201ENST00000362286 90 ntBASIC3.7□□□□□ -1.82
CHMP4BP1P59074 RNU6-1159P-201ENST00000362933 107 ntBASIC3.7□□□□□ -1.82
CHMP4BP1P59074 Y_RNA.230-201ENST00000364348 109 ntBASIC3.7□□□□□ -1.82
CHMP4BP1P59074 RNU6-378P-201ENST00000384324 107 ntBASIC3.7□□□□□ -1.82
CHMP4BP1P59074 RNU6-1289P-201ENST00000384431 106 ntBASIC3.7□□□□□ -1.82
CHMP4BP1P59074 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.7□□□□□ -1.82
CHMP4BP1P59074 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.7□□□□□ -1.82
CHMP4BP1P59074 AC103975.1-201ENST00000482506 483 ntBASIC3.7□□□□□ -1.82
CHMP4BP1P59074 SCARNA11.3-201ENST00000517276 130 ntBASIC3.7□□□□□ -1.82
CHMP4BP1P59074 DEFB131C-201ENST00000528817 165 ntBASIC3.7□□□□□ -1.82
CHMP4BP1P59074 AC079598.5-201ENST00000547460 117 ntBASIC3.7□□□□□ -1.82
CHMP4BP1P59074 AC018448.1-201ENST00000552843 316 ntBASIC3.7□□□□□ -1.82
CHMP4BP1P59074 MIR6852-201ENST00000621699 66 ntBASIC3.7□□□□□ -1.82
CHMP4BP1P59074 AC091932.3-201ENST00000624223 323 ntBASIC3.7□□□□□ -1.82
CHMP4BP1P59074 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
CHMP4BP1P59074 MAPK10-266ENST00000641066 6555 ntBASIC3.7□□□□□ -1.82
CHMP4BP1P59074 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.69□□□□□ -1.82
CHMP4BP1P59074 SNORA25.1-201ENST00000362326 128 ntBASIC3.69□□□□□ -1.82
CHMP4BP1P59074 Y_RNA.82-201ENST00000363000 102 ntBASIC3.69□□□□□ -1.82
CHMP4BP1P59074 Y_RNA.92-201ENST00000363043 102 ntBASIC3.69□□□□□ -1.82
CHMP4BP1P59074 RNU6-727P-201ENST00000363592 107 ntBASIC3.69□□□□□ -1.82
CHMP4BP1P59074 Y_RNA.235-201ENST00000364412 102 ntBASIC3.69□□□□□ -1.82
CHMP4BP1P59074 Y_RNA.306-201ENST00000365015 102 ntBASIC3.69□□□□□ -1.82
CHMP4BP1P59074 Y_RNA.312-201ENST00000365089 102 ntBASIC3.69□□□□□ -1.82
CHMP4BP1P59074 Y_RNA.322-201ENST00000365151 102 ntBASIC3.69□□□□□ -1.82
CHMP4BP1P59074 Y_RNA.595-201ENST00000410403 105 ntBASIC3.69□□□□□ -1.82
CHMP4BP1P59074 CYCSP48-201ENST00000417124 323 ntBASIC3.69□□□□□ -1.82
CHMP4BP1P59074 RAB28P5-201ENST00000427490 651 ntBASIC3.69□□□□□ -1.82
CHMP4BP1P59074 AC007395.1-201ENST00000451333 677 ntBASIC3.69□□□□□ -1.82
CHMP4BP1P59074 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.69□□□□□ -1.82
CHMP4BP1P59074 SNORD2.1-201ENST00000458762 69 ntBASIC3.69□□□□□ -1.82
CHMP4BP1P59074 Y_RNA.650-201ENST00000459002 102 ntBASIC3.69□□□□□ -1.82
CHMP4BP1P59074 RPL23AP67-201ENST00000465341 474 ntBASIC3.69□□□□□ -1.82
CHMP4BP1P59074 RN7SL330P-201ENST00000469709 307 ntBASIC3.69□□□□□ -1.82
CHMP4BP1P59074 AIG1P1-201ENST00000503376 148 ntBASIC3.69□□□□□ -1.82
CHMP4BP1P59074 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.69□□□□□ -1.82
CHMP4BP1P59074 SNORA27.4-201ENST00000516650 95 ntBASIC3.69□□□□□ -1.82
CHMP4BP1P59074 Y_RNA.777-201ENST00000516982 102 ntBASIC3.69□□□□□ -1.82
CHMP4BP1P59074 LARP7P3-201ENST00000579888 337 ntBASIC3.69□□□□□ -1.82
CHMP4BP1P59074 MIR3133-201ENST00000583157 78 ntBASIC3.69□□□□□ -1.82
CHMP4BP1P59074 Y_RNA.771-201ENST00000598668 102 ntBASIC3.69□□□□□ -1.82
CHMP4BP1P59074 Y_RNA.789-201ENST00000622480 102 ntBASIC3.69□□□□□ -1.82
CHMP4BP1P59074 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CHMP4BP1P59074 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.69□□□□□ -1.82
CHMP4BP1P59074 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CHMP4BP1P59074 BX322639.1-202ENST00000423987 2213 ntBASIC3.68□□□□□ -1.82
CHMP4BP1P59074 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.68□□□□□ -1.82
CHMP4BP1P59074 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CHMP4BP1P59074 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.68□□□□□ -1.82
CHMP4BP1P59074 RNU6-1083P-201ENST00000384022 107 ntBASIC3.68□□□□□ -1.82
CHMP4BP1P59074 Y_RNA.464-201ENST00000384282 110 ntBASIC3.68□□□□□ -1.82
CHMP4BP1P59074 CBX3P9-201ENST00000402326 552 ntBASIC3.68□□□□□ -1.82
CHMP4BP1P59074 RNU2-61P-201ENST00000411069 191 ntBASIC3.68□□□□□ -1.82
CHMP4BP1P59074 AIMP1P2-201ENST00000425294 312 ntBASIC3.68□□□□□ -1.82
CHMP4BP1P59074 Z98742.2-201ENST00000431564 187 ntBASIC3.68□□□□□ -1.82
CHMP4BP1P59074 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.68□□□□□ -1.82
CHMP4BP1P59074 AC025750.2-201ENST00000442609 450 ntBASIC3.68□□□□□ -1.82
CHMP4BP1P59074 RNU6-625P-201ENST00000459412 107 ntBASIC3.68□□□□□ -1.82
CHMP4BP1P59074 AC112771.1-201ENST00000463581 102 ntBASIC3.68□□□□□ -1.82
CHMP4BP1P59074 RPL23AP70-201ENST00000483361 460 ntBASIC3.68□□□□□ -1.82
CHMP4BP1P59074 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.68□□□□□ -1.82
CHMP4BP1P59074 RNA5SP54-201ENST00000516951 92 ntBASIC3.68□□□□□ -1.82
CHMP4BP1P59074 RNU6-1212P-201ENST00000517023 104 ntBASIC3.68□□□□□ -1.82
CHMP4BP1P59074 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.68□□□□□ -1.82
CHMP4BP1P59074 AC115990.1-201ENST00000526957 301 ntBASIC3.68□□□□□ -1.82
CHMP4BP1P59074 MIR5004-201ENST00000579078 107 ntBASIC3.68□□□□□ -1.82
CHMP4BP1P59074 AC006001.4-201ENST00000622243 395 ntBASIC3.68□□□□□ -1.82
CHMP4BP1P59074 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.68□□□□□ -1.82
CHMP4BP1P59074 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
CHMP4BP1P59074 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.68□□□□□ -1.82
CHMP4BP1P59074 AL359854.1-201ENST00000614203 1594 ntBASIC3.68□□□□□ -1.82
CHMP4BP1P59074 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.67□□□□□ -1.82
CHMP4BP1P59074 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CHMP4BP1P59074 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CHMP4BP1P59074 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CHMP4BP1P59074 Y_RNA.179-201ENST00000363844 90 ntBASIC3.67□□□□□ -1.82
CHMP4BP1P59074 Y_RNA.217-201ENST00000364214 105 ntBASIC3.67□□□□□ -1.82
CHMP4BP1P59074 RNU6-125P-201ENST00000384505 107 ntBASIC3.67□□□□□ -1.82
CHMP4BP1P59074 RNU6-918P-201ENST00000391219 106 ntBASIC3.67□□□□□ -1.82
CHMP4BP1P59074 MIR208B-201ENST00000401172 77 ntBASIC3.67□□□□□ -1.82
CHMP4BP1P59074 Y_RNA.590-201ENST00000410140 107 ntBASIC3.67□□□□□ -1.82
CHMP4BP1P59074 RNA5SP201-201ENST00000410316 124 ntBASIC3.67□□□□□ -1.82
CHMP4BP1P59074 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.67□□□□□ -1.82
CHMP4BP1P59074 AC097463.2-201ENST00000421074 142 ntBASIC3.67□□□□□ -1.82
CHMP4BP1P59074 POLR2KP2-201ENST00000438155 177 ntBASIC3.67□□□□□ -1.82
CHMP4BP1P59074 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.67□□□□□ -1.82
CHMP4BP1P59074 UQCRBP2-201ENST00000447827 297 ntBASIC3.67□□□□□ -1.82
CHMP4BP1P59074 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.67□□□□□ -1.82
CHMP4BP1P59074 snoU13.14-201ENST00000459372 104 ntBASIC3.67□□□□□ -1.82
CHMP4BP1P59074 Y_RNA.641-201ENST00000459414 105 ntBASIC3.67□□□□□ -1.82
CHMP4BP1P59074 RN7SL863P-201ENST00000462370 296 ntBASIC3.67□□□□□ -1.82
CHMP4BP1P59074 RNU6-1198P-201ENST00000516904 67 ntBASIC3.67□□□□□ -1.82
CHMP4BP1P59074 EIF4BP1-201ENST00000554881 351 ntBASIC3.67□□□□□ -1.82
CHMP4BP1P59074 CYP4A27P-201ENST00000567218 190 ntBASIC3.67□□□□□ -1.82
CHMP4BP1P59074 MIR4765-201ENST00000585007 77 ntBASIC3.67□□□□□ -1.82
CHMP4BP1P59074 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms