Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
NUBP1P53384 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.87□□□□□ -1.63
NUBP1P53384 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC4.87□□□□□ -1.63
NUBP1P53384 RNU1-72P-201ENST00000362976 153 ntBASIC4.87□□□□□ -1.63
NUBP1P53384 RNY1P4-201ENST00000384595 115 ntBASIC4.87□□□□□ -1.63
NUBP1P53384 RNA5SP372-201ENST00000390836 115 ntBASIC4.87□□□□□ -1.63
NUBP1P53384 RNU6-679P-201ENST00000391003 106 ntBASIC4.87□□□□□ -1.63
NUBP1P53384 SNORD77B-201ENST00000391112 67 ntBASIC4.87□□□□□ -1.63
NUBP1P53384 U3.30-201ENST00000391308 210 ntBASIC4.87□□□□□ -1.63
NUBP1P53384 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.87□□□□□ -1.63
NUBP1P53384 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC4.87□□□□□ -1.63
NUBP1P53384 SNORA31.9-201ENST00000516429 84 ntBASIC4.87□□□□□ -1.63
NUBP1P53384 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.87□□□□□ -1.63
NUBP1P53384 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
NUBP1P53384 AC091979.2-201ENST00000607514 214 ntBASIC4.87□□□□□ -1.63
NUBP1P53384 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.87□□□□□ -1.63
NUBP1P53384 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
NUBP1P53384 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.87□□□□□ -1.63
NUBP1P53384 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.87□□□□□ -1.63
NUBP1P53384 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.87□□□□□ -1.63
NUBP1P53384 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
NUBP1P53384 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
NUBP1P53384 RALGAPA1P1-201ENST00000443361 6232 ntBASIC4.87□□□□□ -1.63
NUBP1P53384 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.87□□□□□ -1.63
NUBP1P53384 AC015813.6-201ENST00000624409 5808 ntBASIC4.87□□□□□ -1.63
NUBP1P53384 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
NUBP1P53384 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
NUBP1P53384 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
NUBP1P53384 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
NUBP1P53384 OR14L1P-202ENST00000641545 3009 ntBASIC4.86□□□□□ -1.63
NUBP1P53384 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
NUBP1P53384 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
NUBP1P53384 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
NUBP1P53384 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.86□□□□□ -1.63
NUBP1P53384 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
NUBP1P53384 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
NUBP1P53384 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.86□□□□□ -1.63
NUBP1P53384 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NUBP1P53384 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
NUBP1P53384 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NUBP1P53384 MIR554-201ENST00000384874 96 ntBASIC4.86□□□□□ -1.63
NUBP1P53384 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.86□□□□□ -1.63
NUBP1P53384 RNA5SP241-201ENST00000391326 114 ntBASIC4.86□□□□□ -1.63
NUBP1P53384 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC4.86□□□□□ -1.63
NUBP1P53384 COX6CP13-201ENST00000428703 226 ntBASIC4.86□□□□□ -1.63
NUBP1P53384 SCARNA13-201ENST00000516672 275 ntBASIC4.86□□□□□ -1.63
NUBP1P53384 RNA5SP143-201ENST00000516936 115 ntBASIC4.86□□□□□ -1.63
NUBP1P53384 MIR3936-201ENST00000584304 110 ntBASIC4.86□□□□□ -1.63
NUBP1P53384 LINC00901.1-201ENST00000617252 152 ntBASIC4.86□□□□□ -1.63
NUBP1P53384 AC095038.3-201ENST00000634439 195 ntBASIC4.86□□□□□ -1.63
NUBP1P53384 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
NUBP1P53384 ABCC13-202ENST00000463099 3842 ntBASIC4.86□□□□□ -1.63
NUBP1P53384 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.86□□□□□ -1.63
NUBP1P53384 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
NUBP1P53384 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
NUBP1P53384 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NUBP1P53384 ICE2P2-201ENST00000483823 2787 ntBASIC4.85□□□□□ -1.63
NUBP1P53384 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NUBP1P53384 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.85□□□□□ -1.63
NUBP1P53384 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
NUBP1P53384 Y_RNA.467-201ENST00000384297 102 ntBASIC4.85□□□□□ -1.63
NUBP1P53384 Y_RNA.607-201ENST00000410597 98 ntBASIC4.85□□□□□ -1.63
NUBP1P53384 RNU2-40P-201ENST00000410833 196 ntBASIC4.85□□□□□ -1.63
NUBP1P53384 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC4.85□□□□□ -1.63
NUBP1P53384 AL031183.1-201ENST00000457667 207 ntBASIC4.85□□□□□ -1.63
NUBP1P53384 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC4.85□□□□□ -1.63
NUBP1P53384 RNA5SP230-201ENST00000517039 122 ntBASIC4.85□□□□□ -1.63
NUBP1P53384 MIR4472-2-201ENST00000582069 67 ntBASIC4.85□□□□□ -1.63
NUBP1P53384 AC002984.1-201ENST00000591692 448 ntBASIC4.85□□□□□ -1.63
NUBP1P53384 AC021613.1-201ENST00000623880 111 ntBASIC4.85□□□□□ -1.63
NUBP1P53384 AC006160.2-201ENST00000637708 154 ntBASIC4.85□□□□□ -1.63
NUBP1P53384 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
NUBP1P53384 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC4.85□□□□□ -1.63
NUBP1P53384 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NUBP1P53384 Z83843.1-201ENST00000604070 3685 ntBASIC4.85□□□□□ -1.63
NUBP1P53384 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
NUBP1P53384 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
NUBP1P53384 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
NUBP1P53384 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC4.84□□□□□ -1.63
NUBP1P53384 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC4.84□□□□□ -1.63
NUBP1P53384 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
NUBP1P53384 RNU6-1201P-201ENST00000384227 107 ntBASIC4.84□□□□□ -1.63
NUBP1P53384 SNORA27-201ENST00000384323 126 ntBASIC4.84□□□□□ -1.63
NUBP1P53384 SNORA80E-201ENST00000384744 137 ntBASIC4.84□□□□□ -1.63
NUBP1P53384 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.84□□□□□ -1.63
NUBP1P53384 RPS29P17-201ENST00000430795 166 ntBASIC4.84□□□□□ -1.63
NUBP1P53384 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.84□□□□□ -1.63
NUBP1P53384 SNORA31.1-201ENST00000515993 133 ntBASIC4.84□□□□□ -1.63
NUBP1P53384 RNU6-991P-201ENST00000516168 107 ntBASIC4.84□□□□□ -1.63
NUBP1P53384 SNORA31.5-201ENST00000516190 133 ntBASIC4.84□□□□□ -1.63
NUBP1P53384 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
NUBP1P53384 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.84□□□□□ -1.63
NUBP1P53384 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
NUBP1P53384 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
NUBP1P53384 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
NUBP1P53384 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.83□□□□□ -1.64
NUBP1P53384 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
NUBP1P53384 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
NUBP1P53384 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
NUBP1P53384 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms