Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 AL356057.3-201ENST00000402607 340 ntBASIC2.59□□□□□ -1.99
PRIM2P49643 MIR548P-201ENST00000408336 84 ntBASIC2.59□□□□□ -1.99
PRIM2P49643 AL445305.1-201ENST00000432577 575 ntBASIC2.59□□□□□ -1.99
PRIM2P49643 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.59□□□□□ -1.99
PRIM2P49643 AC007677.1-201ENST00000445757 515 ntBASIC2.59□□□□□ -1.99
PRIM2P49643 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.59□□□□□ -1.99
PRIM2P49643 RNU7-169P-201ENST00000459456 61 ntBASIC2.59□□□□□ -1.99
PRIM2P49643 AC091179.3-201ENST00000474761 144 ntBASIC2.59□□□□□ -1.99
PRIM2P49643 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.59□□□□□ -1.99
PRIM2P49643 RNU6-475P-201ENST00000516073 104 ntBASIC2.59□□□□□ -1.99
PRIM2P49643 RN7SKP49-201ENST00000516675 260 ntBASIC2.59□□□□□ -1.99
PRIM2P49643 RNU1-104P-201ENST00000517280 175 ntBASIC2.59□□□□□ -1.99
PRIM2P49643 GNAI2P1-201ENST00000541815 315 ntBASIC2.59□□□□□ -1.99
PRIM2P49643 PRELID2P1-201ENST00000552837 301 ntBASIC2.59□□□□□ -1.99
PRIM2P49643 AL442163.3-201ENST00000554110 156 ntBASIC2.59□□□□□ -1.99
PRIM2P49643 AC125232.2-201ENST00000592457 143 ntBASIC2.59□□□□□ -1.99
PRIM2P49643 AC005000.2-201ENST00000605468 310 ntBASIC2.59□□□□□ -1.99
PRIM2P49643 AC138305.3-201ENST00000624988 240 ntBASIC2.59□□□□□ -1.99
PRIM2P49643 AL606534.2-204ENST00000635008 178 ntBASIC2.59□□□□□ -1.99
PRIM2P49643 MIR4272-201ENST00000635924 64 ntBASIC2.59□□□□□ -1.99
PRIM2P49643 AC068205.3-201ENST00000636385 468 ntBASIC2.59□□□□□ -1.99
PRIM2P49643 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.59□□□□□ -2
PRIM2P49643 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.59□□□□□ -2
PRIM2P49643 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.59□□□□□ -2
PRIM2P49643 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
PRIM2P49643 AL033519.2-201ENST00000403958 392 ntBASIC2.58□□□□□ -2
PRIM2P49643 Y_RNA.595-201ENST00000410403 105 ntBASIC2.58□□□□□ -2
PRIM2P49643 RNU6-1001P-201ENST00000411265 100 ntBASIC2.58□□□□□ -2
PRIM2P49643 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.58□□□□□ -2
PRIM2P49643 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.58□□□□□ -2
PRIM2P49643 IFNA11P-201ENST00000446352 526 ntBASIC2.58□□□□□ -2
PRIM2P49643 NDUFB4P10-201ENST00000452541 359 ntBASIC2.58□□□□□ -2
PRIM2P49643 RNU2-34P-201ENST00000516534 121 ntBASIC2.58□□□□□ -2
PRIM2P49643 RN7SKP295-201ENST00000517264 153 ntBASIC2.58□□□□□ -2
PRIM2P49643 RNU6-988P-201ENST00000519081 107 ntBASIC2.58□□□□□ -2
PRIM2P49643 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.58□□□□□ -2
PRIM2P49643 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.58□□□□□ -2
PRIM2P49643 AC006600.1-201ENST00000572529 153 ntBASIC2.58□□□□□ -2
PRIM2P49643 AL031274.2-201ENST00000599419 203 ntBASIC2.58□□□□□ -2
PRIM2P49643 AC025754.2-201ENST00000606491 432 ntBASIC2.58□□□□□ -2
PRIM2P49643 AC006157.1-201ENST00000611750 366 ntBASIC2.58□□□□□ -2
PRIM2P49643 MTND5P35-201ENST00000557537 1720 ntBASIC2.58□□□□□ -2
PRIM2P49643 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.57□□□□□ -2
PRIM2P49643 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.57□□□□□ -2
PRIM2P49643 RNU6-545P-201ENST00000362681 104 ntBASIC2.57□□□□□ -2
PRIM2P49643 Y_RNA.394-201ENST00000383942 103 ntBASIC2.57□□□□□ -2
PRIM2P49643 RNU6-474P-201ENST00000384243 107 ntBASIC2.57□□□□□ -2
PRIM2P49643 RNY1P14-201ENST00000384426 108 ntBASIC2.57□□□□□ -2
PRIM2P49643 RNY3P4-201ENST00000384428 101 ntBASIC2.57□□□□□ -2
PRIM2P49643 Y_RNA.526-201ENST00000384572 110 ntBASIC2.57□□□□□ -2
PRIM2P49643 MIR329-1-201ENST00000385028 80 ntBASIC2.57□□□□□ -2
PRIM2P49643 MIR483-201ENST00000385070 76 ntBASIC2.57□□□□□ -2
PRIM2P49643 MIR524-201ENST00000385242 87 ntBASIC2.57□□□□□ -2
PRIM2P49643 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
PRIM2P49643 RNA5SP270-201ENST00000411361 118 ntBASIC2.57□□□□□ -2
PRIM2P49643 AL354751.2-201ENST00000415471 210 ntBASIC2.57□□□□□ -2
PRIM2P49643 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.57□□□□□ -2
PRIM2P49643 MTND1P14-201ENST00000427400 950 ntBASIC2.57□□□□□ -2
PRIM2P49643 CR769767.1-201ENST00000436337 346 ntBASIC2.57□□□□□ -2
PRIM2P49643 AL135938.1-201ENST00000443141 297 ntBASIC2.57□□□□□ -2
PRIM2P49643 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.57□□□□□ -2
PRIM2P49643 U8.22-201ENST00000459141 133 ntBASIC2.57□□□□□ -2
PRIM2P49643 SNORA40.14-201ENST00000516543 86 ntBASIC2.57□□□□□ -2
PRIM2P49643 AP002770.2-201ENST00000543613 532 ntBASIC2.57□□□□□ -2
PRIM2P49643 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.57□□□□□ -2
PRIM2P49643 AC233702.2-202ENST00000562547 291 ntBASIC2.57□□□□□ -2
PRIM2P49643 MIR4446-201ENST00000578505 67 ntBASIC2.57□□□□□ -2
PRIM2P49643 SNORD14A-201ENST00000606526 91 ntBASIC2.57□□□□□ -2
PRIM2P49643 AC083806.3-201ENST00000614016 455 ntBASIC2.57□□□□□ -2
PRIM2P49643 AL078596.1-201ENST00000624856 447 ntBASIC2.57□□□□□ -2
PRIM2P49643 ZNF271P-202ENST00000465539 1970 ntBASIC2.57□□□□□ -2
PRIM2P49643 AC080100.1-201ENST00000624239 5356 ntBASIC2.57□□□□□ -2
PRIM2P49643 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
PRIM2P49643 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
PRIM2P49643 Y_RNA.28-201ENST00000362554 111 ntBASIC2.56□□□□□ -2
PRIM2P49643 RNU6-1301P-201ENST00000362724 104 ntBASIC2.56□□□□□ -2
PRIM2P49643 RNU6-1305P-201ENST00000364353 104 ntBASIC2.56□□□□□ -2
PRIM2P49643 RNU6-1145P-201ENST00000384246 107 ntBASIC2.56□□□□□ -2
PRIM2P49643 MIR1262-201ENST00000408276 93 ntBASIC2.56□□□□□ -2
PRIM2P49643 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.56□□□□□ -2
PRIM2P49643 MCFD2P1-201ENST00000417812 300 ntBASIC2.56□□□□□ -2
PRIM2P49643 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC2.56□□□□□ -2
PRIM2P49643 AC005534.2-201ENST00000431047 433 ntBASIC2.56□□□□□ -2
PRIM2P49643 AC087499.2-201ENST00000432861 149 ntBASIC2.56□□□□□ -2
PRIM2P49643 AC010095.1-201ENST00000443543 144 ntBASIC2.56□□□□□ -2
PRIM2P49643 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.56□□□□□ -2
PRIM2P49643 HMGN2P9-201ENST00000476875 229 ntBASIC2.56□□□□□ -2
PRIM2P49643 AC074133.1-201ENST00000515696 183 ntBASIC2.56□□□□□ -2
PRIM2P49643 SNORA25.10-201ENST00000515926 124 ntBASIC2.56□□□□□ -2
PRIM2P49643 RNU4-77P-201ENST00000516692 156 ntBASIC2.56□□□□□ -2
PRIM2P49643 RNU1-117P-201ENST00000517041 158 ntBASIC2.56□□□□□ -2
PRIM2P49643 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.56□□□□□ -2
PRIM2P49643 AC087441.2-201ENST00000529141 262 ntBASIC2.56□□□□□ -2
PRIM2P49643 AL137790.1-201ENST00000634283 177 ntBASIC2.56□□□□□ -2
PRIM2P49643 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.56□□□□□ -2
PRIM2P49643 Y_RNA.27-201ENST00000362540 103 ntBASIC2.55□□□□□ -2
PRIM2P49643 Y_RNA.138-201ENST00000363462 102 ntBASIC2.55□□□□□ -2
PRIM2P49643 RNY3P11-201ENST00000364153 102 ntBASIC2.55□□□□□ -2
PRIM2P49643 AC117470.1-201ENST00000381974 330 ntBASIC2.55□□□□□ -2
PRIM2P49643 RNU6-1227P-201ENST00000383981 107 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms