Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 RN7SKP57-201ENST00000517248 293 ntBASIC4.97□□□□□ -1.61
PRIM1P49642 RNU2-60P-201ENST00000517290 128 ntBASIC4.97□□□□□ -1.61
PRIM1P49642 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.97□□□□□ -1.61
PRIM1P49642 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
PRIM1P49642 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.97□□□□□ -1.61
PRIM1P49642 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PRIM1P49642 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC4.96□□□□□ -1.62
PRIM1P49642 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.96□□□□□ -1.62
PRIM1P49642 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
PRIM1P49642 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
PRIM1P49642 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
PRIM1P49642 RNU6-1305P-201ENST00000364353 104 ntBASIC4.96□□□□□ -1.62
PRIM1P49642 MIR147B-201ENST00000390185 80 ntBASIC4.96□□□□□ -1.62
PRIM1P49642 MIR1251-201ENST00000408552 70 ntBASIC4.96□□□□□ -1.62
PRIM1P49642 SNORA3C-201ENST00000408792 125 ntBASIC4.96□□□□□ -1.62
PRIM1P49642 ATP5A1P2-201ENST00000412323 255 ntBASIC4.96□□□□□ -1.62
PRIM1P49642 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.96□□□□□ -1.62
PRIM1P49642 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.96□□□□□ -1.62
PRIM1P49642 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC4.96□□□□□ -1.62
PRIM1P49642 AL645939.1-201ENST00000453429 797 ntBASIC4.96□□□□□ -1.62
PRIM1P49642 RNU6-1337P-201ENST00000516525 95 ntBASIC4.96□□□□□ -1.62
PRIM1P49642 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.96□□□□□ -1.62
PRIM1P49642 RPL30P11-203ENST00000598995 310 ntBASIC4.96□□□□□ -1.62
PRIM1P49642 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
PRIM1P49642 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
PRIM1P49642 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
PRIM1P49642 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
PRIM1P49642 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
PRIM1P49642 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PRIM1P49642 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PRIM1P49642 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
PRIM1P49642 RNU4-41P-201ENST00000364426 143 ntBASIC4.95□□□□□ -1.62
PRIM1P49642 RNA5SP167-201ENST00000365461 116 ntBASIC4.95□□□□□ -1.62
PRIM1P49642 AL133412.1-201ENST00000380194 2992 ntBASIC4.95□□□□□ -1.62
PRIM1P49642 MIR199A2-201ENST00000385289 110 ntBASIC4.95□□□□□ -1.62
PRIM1P49642 SNORA48.2-201ENST00000390926 124 ntBASIC4.95□□□□□ -1.62
PRIM1P49642 MLLT10P1-201ENST00000418346 262 ntBASIC4.95□□□□□ -1.62
PRIM1P49642 AC006028.1-201ENST00000438379 402 ntBASIC4.95□□□□□ -1.62
PRIM1P49642 MTCO1P44-201ENST00000441935 243 ntBASIC4.95□□□□□ -1.62
PRIM1P49642 AC115115.1-201ENST00000449927 248 ntBASIC4.95□□□□□ -1.62
PRIM1P49642 RPL23AP62-201ENST00000463396 453 ntBASIC4.95□□□□□ -1.62
PRIM1P49642 AC006445.2-201ENST00000510061 472 ntBASIC4.95□□□□□ -1.62
PRIM1P49642 Y_RNA.677-201ENST00000516401 85 ntBASIC4.95□□□□□ -1.62
PRIM1P49642 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
PRIM1P49642 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.95□□□□□ -1.62
PRIM1P49642 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.95□□□□□ -1.62
PRIM1P49642 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PRIM1P49642 AC007256.1-201ENST00000392253 2765 ntBASIC4.94□□□□□ -1.62
PRIM1P49642 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
PRIM1P49642 Y_RNA.40-201ENST00000362645 93 ntBASIC4.94□□□□□ -1.62
PRIM1P49642 RPS26P45-201ENST00000471748 340 ntBASIC4.94□□□□□ -1.62
PRIM1P49642 Y_RNA.690-201ENST00000516603 95 ntBASIC4.94□□□□□ -1.62
PRIM1P49642 RNU6-537P-201ENST00000517277 103 ntBASIC4.94□□□□□ -1.62
PRIM1P49642 HSPE1P18-201ENST00000517602 280 ntBASIC4.94□□□□□ -1.62
PRIM1P49642 MIR2681-201ENST00000581814 105 ntBASIC4.94□□□□□ -1.62
PRIM1P49642 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.94□□□□□ -1.62
PRIM1P49642 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
PRIM1P49642 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PRIM1P49642 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC4.93□□□□□ -1.62
PRIM1P49642 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.93□□□□□ -1.62
PRIM1P49642 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.93□□□□□ -1.62
PRIM1P49642 RNU6-1164P-201ENST00000364428 107 ntBASIC4.93□□□□□ -1.62
PRIM1P49642 MIR300-201ENST00000401138 83 ntBASIC4.93□□□□□ -1.62
PRIM1P49642 IL33-202ENST00000417746 2327 ntTSL 2 BASIC4.93□□□□□ -1.62
PRIM1P49642 AL672296.1-201ENST00000427780 2158 ntBASIC4.93□□□□□ -1.62
PRIM1P49642 MTATP6P21-201ENST00000440681 189 ntBASIC4.93□□□□□ -1.62
PRIM1P49642 Y_RNA.649-201ENST00000459077 103 ntBASIC4.93□□□□□ -1.62
PRIM1P49642 RPS26P55-201ENST00000471178 356 ntBASIC4.93□□□□□ -1.62
PRIM1P49642 AP002884.2-201ENST00000471647 395 ntBASIC4.93□□□□□ -1.62
PRIM1P49642 AC010598.1-201ENST00000510378 103 ntBASIC4.93□□□□□ -1.62
PRIM1P49642 RN7SKP19-201ENST00000516016 252 ntBASIC4.93□□□□□ -1.62
PRIM1P49642 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.93□□□□□ -1.62
PRIM1P49642 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.93□□□□□ -1.62
PRIM1P49642 AL360157.1-201ENST00000565962 87 ntBASIC4.93□□□□□ -1.62
PRIM1P49642 MIR4298-201ENST00000584380 73 ntBASIC4.93□□□□□ -1.62
PRIM1P49642 HMGN2P15-201ENST00000585707 270 ntBASIC4.93□□□□□ -1.62
PRIM1P49642 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC4.93□□□□□ -1.62
PRIM1P49642 AL021707.8-201ENST00000609428 183 ntBASIC4.93□□□□□ -1.62
PRIM1P49642 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.93□□□□□ -1.62
PRIM1P49642 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC4.93□□□□□ -1.62
PRIM1P49642 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PRIM1P49642 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PRIM1P49642 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
PRIM1P49642 Z82209.1-201ENST00000422141 2135 ntBASIC4.93□□□□□ -1.62
PRIM1P49642 AL049781.1-201ENST00000623195 3585 ntBASIC4.93□□□□□ -1.62
PRIM1P49642 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PRIM1P49642 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.92□□□□□ -1.62
PRIM1P49642 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PRIM1P49642 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.92□□□□□ -1.62
PRIM1P49642 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
PRIM1P49642 SNORA27.1-201ENST00000362604 124 ntBASIC4.92□□□□□ -1.62
PRIM1P49642 RNU6-484P-201ENST00000384016 107 ntBASIC4.92□□□□□ -1.62
PRIM1P49642 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
PRIM1P49642 AL135786.1-201ENST00000415892 214 ntBASIC4.92□□□□□ -1.62
PRIM1P49642 RNA5SP164-201ENST00000516533 110 ntBASIC4.92□□□□□ -1.62
PRIM1P49642 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.92□□□□□ -1.62
PRIM1P49642 Six3os1_7.1-201ENST00000621512 201 ntBASIC4.92□□□□□ -1.62
PRIM1P49642 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.92□□□□□ -1.62
PRIM1P49642 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PRIM1P49642 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms