Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 AL360157.1-201ENST00000565962 87 ntBASIC3.83□□□□□ -1.8
CHRNA4P43681 AC025281.1-201ENST00000567026 265 ntBASIC3.83□□□□□ -1.8
CHRNA4P43681 SNORA62.6-201ENST00000606322 83 ntBASIC3.83□□□□□ -1.8
CHRNA4P43681 MIR486-1-201ENST00000612171 68 ntBASIC3.83□□□□□ -1.8
CHRNA4P43681 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.83□□□□□ -1.8
CHRNA4P43681 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CHRNA4P43681 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.83□□□□□ -1.8
CHRNA4P43681 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
CHRNA4P43681 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CHRNA4P43681 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CHRNA4P43681 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
CHRNA4P43681 SNORD114-7-201ENST00000362520 77 ntBASIC3.82□□□□□ -1.8
CHRNA4P43681 RNU6-674P-201ENST00000363831 107 ntBASIC3.82□□□□□ -1.8
CHRNA4P43681 RNU6-1323P-201ENST00000384025 107 ntBASIC3.82□□□□□ -1.8
CHRNA4P43681 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.82□□□□□ -1.8
CHRNA4P43681 AL590004.2-201ENST00000404787 371 ntBASIC3.82□□□□□ -1.8
CHRNA4P43681 RNA5SP390-201ENST00000410191 113 ntBASIC3.82□□□□□ -1.8
CHRNA4P43681 Y_RNA.593-201ENST00000410292 98 ntBASIC3.82□□□□□ -1.8
CHRNA4P43681 AL139281.1-201ENST00000422120 335 ntBASIC3.82□□□□□ -1.8
CHRNA4P43681 AL358232.1-201ENST00000448030 501 ntBASIC3.82□□□□□ -1.8
CHRNA4P43681 RPS29P2-201ENST00000479278 136 ntBASIC3.82□□□□□ -1.8
CHRNA4P43681 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.82□□□□□ -1.8
CHRNA4P43681 IGKV2D-19-201ENST00000523346 262 ntBASIC3.82□□□□□ -1.8
CHRNA4P43681 AC087499.8-201ENST00000578406 226 ntBASIC3.82□□□□□ -1.8
CHRNA4P43681 MIR4286-201ENST00000580651 93 ntBASIC3.82□□□□□ -1.8
CHRNA4P43681 MIR3136-201ENST00000583498 78 ntBASIC3.82□□□□□ -1.8
CHRNA4P43681 SNORD98-201ENST00000636377 67 ntBASIC3.82□□□□□ -1.8
CHRNA4P43681 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
CHRNA4P43681 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.82□□□□□ -1.8
CHRNA4P43681 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CHRNA4P43681 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CHRNA4P43681 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CHRNA4P43681 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CHRNA4P43681 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CHRNA4P43681 RNU1-75P-201ENST00000347264 129 ntBASIC3.81□□□□□ -1.8
CHRNA4P43681 Y_RNA.78-201ENST00000362970 110 ntBASIC3.81□□□□□ -1.8
CHRNA4P43681 DYNLT3P1-201ENST00000378574 347 ntBASIC3.81□□□□□ -1.8
CHRNA4P43681 RNU1-89P-201ENST00000384592 164 ntBASIC3.81□□□□□ -1.8
CHRNA4P43681 CBX3P9-201ENST00000402326 552 ntBASIC3.81□□□□□ -1.8
CHRNA4P43681 AC244098.2-201ENST00000422068 99 ntBASIC3.81□□□□□ -1.8
CHRNA4P43681 AC092047.1-201ENST00000424997 240 ntBASIC3.81□□□□□ -1.8
CHRNA4P43681 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.81□□□□□ -1.8
CHRNA4P43681 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.81□□□□□ -1.8
CHRNA4P43681 SNORA18.4-201ENST00000516440 124 ntBASIC3.81□□□□□ -1.8
CHRNA4P43681 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.81□□□□□ -1.8
CHRNA4P43681 AC009163.5-201ENST00000575421 637 ntBASIC3.81□□□□□ -1.8
CHRNA4P43681 AC090897.2-201ENST00000581715 130 ntBASIC3.81□□□□□ -1.8
CHRNA4P43681 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.81□□□□□ -1.8
CHRNA4P43681 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
CHRNA4P43681 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.81□□□□□ -1.8
CHRNA4P43681 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.81□□□□□ -1.8
CHRNA4P43681 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CHRNA4P43681 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CHRNA4P43681 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.8□□□□□ -1.8
CHRNA4P43681 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.8□□□□□ -1.8
CHRNA4P43681 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CHRNA4P43681 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.8□□□□□ -1.8
CHRNA4P43681 Y_RNA.91-201ENST00000363042 107 ntBASIC3.8□□□□□ -1.8
CHRNA4P43681 Y_RNA.634-201ENST00000364811 113 ntBASIC3.8□□□□□ -1.8
CHRNA4P43681 SNORA62.3-201ENST00000365110 153 ntBASIC3.8□□□□□ -1.8
CHRNA4P43681 Y_RNA.342-201ENST00000365352 113 ntBASIC3.8□□□□□ -1.8
CHRNA4P43681 RNA5SP167-201ENST00000365461 116 ntBASIC3.8□□□□□ -1.8
CHRNA4P43681 RNU6-622P-201ENST00000384272 103 ntBASIC3.8□□□□□ -1.8
CHRNA4P43681 HMGN2P8-201ENST00000391458 268 ntBASIC3.8□□□□□ -1.8
CHRNA4P43681 RNU2-70P-201ENST00000410718 179 ntBASIC3.8□□□□□ -1.8
CHRNA4P43681 RNA5SP127-201ENST00000411051 133 ntBASIC3.8□□□□□ -1.8
CHRNA4P43681 AL139247.1-201ENST00000422768 325 ntBASIC3.8□□□□□ -1.8
CHRNA4P43681 AF228730.3-201ENST00000436691 102 ntBASIC3.8□□□□□ -1.8
CHRNA4P43681 PGBD4P5-201ENST00000445958 426 ntBASIC3.8□□□□□ -1.8
CHRNA4P43681 RPL37P4-201ENST00000448908 268 ntBASIC3.8□□□□□ -1.8
CHRNA4P43681 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.8□□□□□ -1.8
CHRNA4P43681 AC107297.1-201ENST00000459991 176 ntBASIC3.8□□□□□ -1.8
CHRNA4P43681 RPL30P5-201ENST00000494923 336 ntBASIC3.8□□□□□ -1.8
CHRNA4P43681 RNU7-116P-201ENST00000516940 62 ntBASIC3.8□□□□□ -1.8
CHRNA4P43681 RNU1-117P-201ENST00000517041 158 ntBASIC3.8□□□□□ -1.8
CHRNA4P43681 RNU6-365P-201ENST00000517113 106 ntBASIC3.8□□□□□ -1.8
CHRNA4P43681 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.8□□□□□ -1.8
CHRNA4P43681 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC3.8□□□□□ -1.8
CHRNA4P43681 AC027176.1-201ENST00000560204 514 ntBASIC3.8□□□□□ -1.8
CHRNA4P43681 POLR3GP1-201ENST00000594073 261 ntBASIC3.8□□□□□ -1.8
CHRNA4P43681 AL049861.1-201ENST00000603130 150 ntBASIC3.8□□□□□ -1.8
CHRNA4P43681 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CHRNA4P43681 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CHRNA4P43681 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CHRNA4P43681 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.8□□□□□ -1.8
CHRNA4P43681 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.8□□□□□ -1.8
CHRNA4P43681 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
CHRNA4P43681 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CHRNA4P43681 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CHRNA4P43681 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.79□□□□□ -1.8
CHRNA4P43681 RNA5SP322-201ENST00000363617 119 ntBASIC3.79□□□□□ -1.8
CHRNA4P43681 U3.8-201ENST00000363675 217 ntBASIC3.79□□□□□ -1.8
CHRNA4P43681 RN7SKP280-201ENST00000364196 304 ntBASIC3.79□□□□□ -1.8
CHRNA4P43681 RNU4-41P-201ENST00000364426 143 ntBASIC3.79□□□□□ -1.8
CHRNA4P43681 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.79□□□□□ -1.8
CHRNA4P43681 RNA5SP235-201ENST00000365411 114 ntBASIC3.79□□□□□ -1.8
CHRNA4P43681 RNU6-487P-201ENST00000365430 104 ntBASIC3.79□□□□□ -1.8
CHRNA4P43681 RNU1-73P-201ENST00000383971 164 ntBASIC3.79□□□□□ -1.8
CHRNA4P43681 RNA5SP171-201ENST00000391071 115 ntBASIC3.79□□□□□ -1.8
CHRNA4P43681 SNORA3.3-201ENST00000408712 125 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms