Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 RNU6-1103P-201ENST00000384150 107 ntBASIC0.81□□□□□ -2.28
COL4A2P08572 RNU6-17P-201ENST00000384245 107 ntBASIC0.81□□□□□ -2.28
COL4A2P08572 RNU6-18P-201ENST00000384527 107 ntBASIC0.81□□□□□ -2.28
COL4A2P08572 SNORA12.2-201ENST00000391040 156 ntBASIC0.81□□□□□ -2.28
COL4A2P08572 SNORA26.3-201ENST00000391119 136 ntBASIC0.81□□□□□ -2.28
COL4A2P08572 MIR936-201ENST00000401264 98 ntBASIC0.81□□□□□ -2.28
COL4A2P08572 RN7SKP200-201ENST00000410564 320 ntBASIC0.81□□□□□ -2.28
COL4A2P08572 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.81□□□□□ -2.28
COL4A2P08572 MTND2P9-201ENST00000422293 931 ntBASIC0.81□□□□□ -2.28
COL4A2P08572 UBE2V1P8-201ENST00000437166 265 ntBASIC0.81□□□□□ -2.28
COL4A2P08572 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.81□□□□□ -2.28
COL4A2P08572 SUMO2P18-201ENST00000518873 252 ntBASIC0.81□□□□□ -2.28
COL4A2P08572 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC0.81□□□□□ -2.28
COL4A2P08572 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.81□□□□□ -2.28
COL4A2P08572 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.81□□□□□ -2.28
COL4A2P08572 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC0.81□□□□□ -2.28
COL4A2P08572 MIR4760-201ENST00000585040 80 ntBASIC0.81□□□□□ -2.28
COL4A2P08572 AP001836.1-201ENST00000604675 523 ntBASIC0.81□□□□□ -2.28
COL4A2P08572 AL354950.2-201ENST00000617939 290 ntBASIC0.81□□□□□ -2.28
COL4A2P08572 AL136221.1-201ENST00000621449 509 ntBASIC0.81□□□□□ -2.28
COL4A2P08572 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.81□□□□□ -2.28
COL4A2P08572 AC009541.1-201ENST00000438279 2662 ntBASIC0.8□□□□□ -2.28
COL4A2P08572 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.8□□□□□ -2.28
COL4A2P08572 RNU6-552P-201ENST00000362869 119 ntBASIC0.8□□□□□ -2.28
COL4A2P08572 SNORD114-23-201ENST00000363536 72 ntBASIC0.8□□□□□ -2.28
COL4A2P08572 RNU6-271P-201ENST00000363858 105 ntBASIC0.8□□□□□ -2.28
COL4A2P08572 RNU6-248P-201ENST00000410720 107 ntBASIC0.8□□□□□ -2.28
COL4A2P08572 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC0.8□□□□□ -2.28
COL4A2P08572 ARL5AP1-201ENST00000418991 388 ntBASIC0.8□□□□□ -2.28
COL4A2P08572 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.8□□□□□ -2.28
COL4A2P08572 MTCO1P44-201ENST00000441935 243 ntBASIC0.8□□□□□ -2.28
COL4A2P08572 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC0.8□□□□□ -2.28
COL4A2P08572 MTCO3P38-201ENST00000468910 766 ntBASIC0.8□□□□□ -2.28
COL4A2P08572 AC098862.1-201ENST00000504991 413 ntBASIC0.8□□□□□ -2.28
COL4A2P08572 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.8□□□□□ -2.28
COL4A2P08572 AC025465.3-201ENST00000510570 311 ntBASIC0.8□□□□□ -2.28
COL4A2P08572 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC0.8□□□□□ -2.28
COL4A2P08572 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC0.8□□□□□ -2.28
COL4A2P08572 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
COL4A2P08572 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.8□□□□□ -2.28
COL4A2P08572 AL137161.1-201ENST00000532231 390 ntBASIC0.8□□□□□ -2.28
COL4A2P08572 CARD18-203ENST00000532895 422 ntTSL 2 BASIC0.8□□□□□ -2.28
COL4A2P08572 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.8□□□□□ -2.28
COL4A2P08572 AC119751.7-201ENST00000600494 245 ntBASIC0.8□□□□□ -2.28
COL4A2P08572 AC023510.2-201ENST00000622162 746 ntBASIC0.8□□□□□ -2.28
COL4A2P08572 AL450472.1-202ENST00000637286 180 ntBASIC0.8□□□□□ -2.28
COL4A2P08572 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.8□□□□□ -2.28
COL4A2P08572 AC010615.1-201ENST00000594254 1764 ntBASIC0.79□□□□□ -2.28
COL4A2P08572 RNU6-1303P-201ENST00000364841 107 ntBASIC0.79□□□□□ -2.28
COL4A2P08572 RNU6-996P-201ENST00000365438 107 ntBASIC0.79□□□□□ -2.28
COL4A2P08572 RNU6-338P-201ENST00000383888 105 ntBASIC0.79□□□□□ -2.28
COL4A2P08572 RNU6-418P-201ENST00000384035 107 ntBASIC0.79□□□□□ -2.28
COL4A2P08572 MIR520A-201ENST00000384862 85 ntBASIC0.79□□□□□ -2.28
COL4A2P08572 RNU6-1093P-201ENST00000391194 107 ntBASIC0.79□□□□□ -2.28
COL4A2P08572 AL606923.1-201ENST00000406616 190 ntBASIC0.79□□□□□ -2.28
COL4A2P08572 MTND4P32-201ENST00000437189 1237 ntBASIC0.79□□□□□ -2.28
COL4A2P08572 HSPE1P9-201ENST00000440046 311 ntBASIC0.79□□□□□ -2.28
COL4A2P08572 RPS27AP8-201ENST00000452665 445 ntBASIC0.79□□□□□ -2.28
COL4A2P08572 RNU7-167P-201ENST00000459160 62 ntBASIC0.79□□□□□ -2.28
COL4A2P08572 RNU7-138P-201ENST00000459479 64 ntBASIC0.79□□□□□ -2.28
COL4A2P08572 RNU6-948P-201ENST00000516374 107 ntBASIC0.79□□□□□ -2.28
COL4A2P08572 AC016256.1-201ENST00000547971 354 ntBASIC0.79□□□□□ -2.28
COL4A2P08572 Z99497.2-201ENST00000603634 310 ntBASIC0.79□□□□□ -2.28
COL4A2P08572 AL078604.3-201ENST00000615580 211 ntBASIC0.79□□□□□ -2.28
COL4A2P08572 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.79□□□□□ -2.28
COL4A2P08572 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.79□□□□□ -2.28
COL4A2P08572 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC0.79□□□□□ -2.28
COL4A2P08572 AC100821.1-201ENST00000523153 2479 ntBASIC0.78□□□□□ -2.28
COL4A2P08572 SNORD33-201ENST00000362761 85 ntBASIC0.78□□□□□ -2.28
COL4A2P08572 RNU6-82P-201ENST00000363970 107 ntBASIC0.78□□□□□ -2.28
COL4A2P08572 RNU6-266P-201ENST00000364225 107 ntBASIC0.78□□□□□ -2.28
COL4A2P08572 RNU4-66P-201ENST00000365199 138 ntBASIC0.78□□□□□ -2.28
COL4A2P08572 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC0.78□□□□□ -2.28
COL4A2P08572 JTBP1-201ENST00000441314 247 ntBASIC0.78□□□□□ -2.28
COL4A2P08572 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC0.78□□□□□ -2.28
COL4A2P08572 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.78□□□□□ -2.28
COL4A2P08572 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC0.78□□□□□ -2.28
COL4A2P08572 AL356010.1-201ENST00000456364 102 ntBASIC0.78□□□□□ -2.28
COL4A2P08572 RPL26P26-201ENST00000480251 434 ntBASIC0.78□□□□□ -2.28
COL4A2P08572 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.78□□□□□ -2.28
COL4A2P08572 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.78□□□□□ -2.28
COL4A2P08572 SNORA14.1-201ENST00000516113 141 ntBASIC0.78□□□□□ -2.28
COL4A2P08572 RNU6-1146P-201ENST00000516282 102 ntBASIC0.78□□□□□ -2.28
COL4A2P08572 RRN3P3-201ENST00000549207 578 ntBASIC0.78□□□□□ -2.28
COL4A2P08572 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.78□□□□□ -2.28
COL4A2P08572 SNORA77B-201ENST00000578179 125 ntBASIC0.78□□□□□ -2.28
COL4A2P08572 AC068790.2-201ENST00000602601 557 ntBASIC0.78□□□□□ -2.28
COL4A2P08572 Z98751.3-201ENST00000604447 521 ntBASIC0.78□□□□□ -2.28
COL4A2P08572 AL121890.5-201ENST00000620848 304 ntBASIC0.78□□□□□ -2.28
COL4A2P08572 MIR6513-201ENST00000621188 64 ntBASIC0.78□□□□□ -2.28
COL4A2P08572 MIR924-201ENST00000638017 53 ntBASIC0.78□□□□□ -2.28
COL4A2P08572 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.78□□□□□ -2.28
COL4A2P08572 AC008163.1-202ENST00000636004 2889 ntBASIC0.78□□□□□ -2.28
COL4A2P08572 RNU6-1026P-201ENST00000384465 108 ntBASIC0.78□□□□□ -2.29
COL4A2P08572 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.78□□□□□ -2.29
COL4A2P08572 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.78□□□□□ -2.29
COL4A2P08572 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.78□□□□□ -2.29
COL4A2P08572 AC090960.1-201ENST00000421072 306 ntBASIC0.78□□□□□ -2.29
COL4A2P08572 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.78□□□□□ -2.29
COL4A2P08572 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.78□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms