Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 SNORA57.3-201ENST00000411095 141 ntBASIC3.71□□□□□ -1.82
PDGFAP04085 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.71□□□□□ -1.82
PDGFAP04085 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.71□□□□□ -1.82
PDGFAP04085 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.71□□□□□ -1.82
PDGFAP04085 AC110768.1-201ENST00000509222 400 ntBASIC3.71□□□□□ -1.82
PDGFAP04085 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.71□□□□□ -1.82
PDGFAP04085 SCARNA8-201ENST00000515924 131 ntBASIC3.71□□□□□ -1.82
PDGFAP04085 RNU6-479P-201ENST00000516348 105 ntBASIC3.71□□□□□ -1.82
PDGFAP04085 RNU1-95P-201ENST00000516357 160 ntBASIC3.71□□□□□ -1.82
PDGFAP04085 RNU1-128P-201ENST00000516704 160 ntBASIC3.71□□□□□ -1.82
PDGFAP04085 RNU6-453P-201ENST00000516819 85 ntBASIC3.71□□□□□ -1.82
PDGFAP04085 RNU6-586P-201ENST00000517265 104 ntBASIC3.71□□□□□ -1.82
PDGFAP04085 AC109329.2-201ENST00000519658 482 ntBASIC3.71□□□□□ -1.82
PDGFAP04085 AC068647.2-201ENST00000637380 353 ntBASIC3.71□□□□□ -1.82
PDGFAP04085 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.71□□□□□ -1.82
PDGFAP04085 AL161912.2-201ENST00000565707 3007 ntBASIC3.7□□□□□ -1.82
PDGFAP04085 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PDGFAP04085 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.7□□□□□ -1.82
PDGFAP04085 SNORA27.1-201ENST00000362604 124 ntBASIC3.7□□□□□ -1.82
PDGFAP04085 RNU6-944P-201ENST00000364023 107 ntBASIC3.7□□□□□ -1.82
PDGFAP04085 SNORD31B-201ENST00000364977 69 ntBASIC3.7□□□□□ -1.82
PDGFAP04085 Y_RNA.337-201ENST00000365312 102 ntBASIC3.7□□□□□ -1.82
PDGFAP04085 SNORA5A-201ENST00000384111 134 ntBASIC3.7□□□□□ -1.82
PDGFAP04085 RNU6-975P-201ENST00000384296 105 ntBASIC3.7□□□□□ -1.82
PDGFAP04085 MIR513C-201ENST00000401352 84 ntBASIC3.7□□□□□ -1.82
PDGFAP04085 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.7□□□□□ -1.82
PDGFAP04085 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.7□□□□□ -1.82
PDGFAP04085 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.7□□□□□ -1.82
PDGFAP04085 AL121914.1-201ENST00000450188 156 ntBASIC3.7□□□□□ -1.82
PDGFAP04085 RNU6-221P-201ENST00000459541 99 ntBASIC3.7□□□□□ -1.82
PDGFAP04085 AC010409.1-201ENST00000487382 476 ntBASIC3.7□□□□□ -1.82
PDGFAP04085 AC010598.1-201ENST00000510378 103 ntBASIC3.7□□□□□ -1.82
PDGFAP04085 RNU6-313P-201ENST00000516317 112 ntBASIC3.7□□□□□ -1.82
PDGFAP04085 RNU7-115P-201ENST00000516433 55 ntBASIC3.7□□□□□ -1.82
PDGFAP04085 RNU6-1337P-201ENST00000516525 95 ntBASIC3.7□□□□□ -1.82
PDGFAP04085 RNU6-1231P-201ENST00000517185 103 ntBASIC3.7□□□□□ -1.82
PDGFAP04085 MIR3200-201ENST00000580767 85 ntBASIC3.7□□□□□ -1.82
PDGFAP04085 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC3.7□□□□□ -1.82
PDGFAP04085 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.7□□□□□ -1.82
PDGFAP04085 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
PDGFAP04085 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.7□□□□□ -1.82
PDGFAP04085 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.7□□□□□ -1.82
PDGFAP04085 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.7□□□□□ -1.82
PDGFAP04085 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PDGFAP04085 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
PDGFAP04085 Z82217.1-201ENST00000625157 8149 ntBASIC3.7□□□□□ -1.82
PDGFAP04085 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PDGFAP04085 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.69□□□□□ -1.82
PDGFAP04085 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
PDGFAP04085 Y_RNA.229-201ENST00000364347 113 ntBASIC3.69□□□□□ -1.82
PDGFAP04085 U8.7-201ENST00000364940 136 ntBASIC3.69□□□□□ -1.82
PDGFAP04085 RNU6-1228P-201ENST00000391014 107 ntBASIC3.69□□□□□ -1.82
PDGFAP04085 SNORA3C-201ENST00000408792 125 ntBASIC3.69□□□□□ -1.82
PDGFAP04085 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.69□□□□□ -1.82
PDGFAP04085 ABCF2P2-201ENST00000450549 296 ntBASIC3.69□□□□□ -1.82
PDGFAP04085 AC117454.1-201ENST00000491120 168 ntBASIC3.69□□□□□ -1.82
PDGFAP04085 AC087499.8-201ENST00000578406 226 ntBASIC3.69□□□□□ -1.82
PDGFAP04085 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.69□□□□□ -1.82
PDGFAP04085 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.69□□□□□ -1.82
PDGFAP04085 AC019176.2-201ENST00000611579 315 ntBASIC3.69□□□□□ -1.82
PDGFAP04085 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PDGFAP04085 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PDGFAP04085 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
PDGFAP04085 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PDGFAP04085 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.69□□□□□ -1.82
PDGFAP04085 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PDGFAP04085 Z82209.1-201ENST00000422141 2135 ntBASIC3.68□□□□□ -1.82
PDGFAP04085 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.68□□□□□ -1.82
PDGFAP04085 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.68□□□□□ -1.82
PDGFAP04085 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
PDGFAP04085 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PDGFAP04085 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PDGFAP04085 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
PDGFAP04085 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PDGFAP04085 SNORA60-201ENST00000362396 134 ntBASIC3.68□□□□□ -1.82
PDGFAP04085 Y_RNA.172-201ENST00000363765 102 ntBASIC3.68□□□□□ -1.82
PDGFAP04085 RNU6-818P-201ENST00000364837 108 ntBASIC3.68□□□□□ -1.82
PDGFAP04085 RNU4-11P-201ENST00000365287 132 ntBASIC3.68□□□□□ -1.82
PDGFAP04085 SNORD14D-201ENST00000384390 87 ntBASIC3.68□□□□□ -1.82
PDGFAP04085 RNU6-57P-201ENST00000411348 103 ntBASIC3.68□□□□□ -1.82
PDGFAP04085 RPL30P13-201ENST00000418873 348 ntBASIC3.68□□□□□ -1.82
PDGFAP04085 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.68□□□□□ -1.82
PDGFAP04085 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC3.68□□□□□ -1.82
PDGFAP04085 RPS26P55-201ENST00000471178 356 ntBASIC3.68□□□□□ -1.82
PDGFAP04085 AC018630.3-201ENST00000542637 96 ntBASIC3.68□□□□□ -1.82
PDGFAP04085 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.68□□□□□ -1.82
PDGFAP04085 AC025627.2-201ENST00000576220 160 ntBASIC3.68□□□□□ -1.82
PDGFAP04085 AC096577.2-201ENST00000611455 153 ntBASIC3.68□□□□□ -1.82
PDGFAP04085 AC244205.2-202ENST00000635781 342 ntBASIC3.68□□□□□ -1.82
PDGFAP04085 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PDGFAP04085 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PDGFAP04085 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.68□□□□□ -1.82
PDGFAP04085 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
PDGFAP04085 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PDGFAP04085 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PDGFAP04085 AC009487.4-201ENST00000624969 3585 ntBASIC3.67□□□□□ -1.82
PDGFAP04085 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
PDGFAP04085 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PDGFAP04085 RNU6-199P-201ENST00000362954 107 ntBASIC3.67□□□□□ -1.82
PDGFAP04085 SNORD50B-201ENST00000364995 70 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms