Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC-0.09□□□□□ -2.42
CACNA1AO00555 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC-0.09□□□□□ -2.42
CACNA1AO00555 AC093850.1-201ENST00000454121 251 ntBASIC-0.09□□□□□ -2.42
CACNA1AO00555 ELOCP24-201ENST00000456370 334 ntBASIC-0.09□□□□□ -2.42
CACNA1AO00555 AC091860.1-201ENST00000505723 432 ntBASIC-0.09□□□□□ -2.42
CACNA1AO00555 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC-0.09□□□□□ -2.42
CACNA1AO00555 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC-0.09□□□□□ -2.42
CACNA1AO00555 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC-0.09□□□□□ -2.42
CACNA1AO00555 UBE2Q2P8-201ENST00000560644 102 ntBASIC-0.09□□□□□ -2.42
CACNA1AO00555 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC-0.09□□□□□ -2.42
CACNA1AO00555 AC100814.1-201ENST00000606963 623 ntBASIC-0.09□□□□□ -2.42
CACNA1AO00555 RNU6-94P-201ENST00000607728 107 ntBASIC-0.09□□□□□ -2.42
CACNA1AO00555 MIR8076-201ENST00000611401 83 ntBASIC-0.09□□□□□ -2.42
CACNA1AO00555 AL159153.1-201ENST00000619688 317 ntBASIC-0.09□□□□□ -2.42
CACNA1AO00555 SCARNA4-202ENST00000625402 129 ntBASIC-0.09□□□□□ -2.42
CACNA1AO00555 SNORD56.1-201ENST00000362913 68 ntBASIC-0.1□□□□□ -2.42
CACNA1AO00555 RNU6-216P-201ENST00000363282 104 ntBASIC-0.1□□□□□ -2.42
CACNA1AO00555 SNORD116-13-201ENST00000384408 92 ntBASIC-0.1□□□□□ -2.42
CACNA1AO00555 SNORA12.2-201ENST00000391040 156 ntBASIC-0.1□□□□□ -2.42
CACNA1AO00555 SNORA75.6-201ENST00000391318 127 ntBASIC-0.1□□□□□ -2.42
CACNA1AO00555 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC-0.1□□□□□ -2.42
CACNA1AO00555 AL356583.2-201ENST00000426536 280 ntBASIC-0.1□□□□□ -2.42
CACNA1AO00555 AL035398.1-201ENST00000430869 322 ntBASIC-0.1□□□□□ -2.42
CACNA1AO00555 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC-0.1□□□□□ -2.42
CACNA1AO00555 AC007969.2-201ENST00000441891 191 ntBASIC-0.1□□□□□ -2.42
CACNA1AO00555 MTND5P2-201ENST00000442927 1142 ntBASIC-0.1□□□□□ -2.42
CACNA1AO00555 RPL37P6-201ENST00000460682 294 ntBASIC-0.1□□□□□ -2.42
CACNA1AO00555 OR9P1P-201ENST00000496431 281 ntBASIC-0.1□□□□□ -2.42
CACNA1AO00555 RNU6-1041P-201ENST00000516254 102 ntBASIC-0.1□□□□□ -2.42
CACNA1AO00555 RNU6-948P-201ENST00000516374 107 ntBASIC-0.1□□□□□ -2.42
CACNA1AO00555 RNU5F-4P-201ENST00000516581 114 ntBASIC-0.1□□□□□ -2.42
CACNA1AO00555 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC-0.1□□□□□ -2.42
CACNA1AO00555 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC-0.1□□□□□ -2.42
CACNA1AO00555 AC024995.1-201ENST00000523014 93 ntBASIC-0.1□□□□□ -2.42
CACNA1AO00555 AF235103.2-201ENST00000525753 346 ntBASIC-0.1□□□□□ -2.42
CACNA1AO00555 AC115989.2-201ENST00000578640 563 ntBASIC-0.1□□□□□ -2.42
CACNA1AO00555 MIR3129-201ENST00000581095 76 ntBASIC-0.1□□□□□ -2.42
CACNA1AO00555 AL353778.1-201ENST00000603149 408 ntBASIC-0.1□□□□□ -2.42
CACNA1AO00555 BNIP3P9-201ENST00000603714 553 ntBASIC-0.1□□□□□ -2.42
CACNA1AO00555 AC104073.3-201ENST00000610942 955 ntBASIC-0.1□□□□□ -2.42
CACNA1AO00555 AL391903.3-201ENST00000612158 163 ntBASIC-0.1□□□□□ -2.42
CACNA1AO00555 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC-0.1□□□□□ -2.42
CACNA1AO00555 AL513423.1-201ENST00000621695 132 ntBASIC-0.1□□□□□ -2.42
CACNA1AO00555 uc_338.36-201ENST00000622331 158 ntBASIC-0.1□□□□□ -2.42
CACNA1AO00555 RNU6-78P-201ENST00000362897 107 ntBASIC-0.1□□□□□ -2.43
CACNA1AO00555 Y_RNA.99-201ENST00000363138 105 ntBASIC-0.1□□□□□ -2.43
CACNA1AO00555 RNU6-1210P-201ENST00000363775 107 ntBASIC-0.1□□□□□ -2.43
CACNA1AO00555 RNU6-142P-201ENST00000384019 107 ntBASIC-0.1□□□□□ -2.43
CACNA1AO00555 RNU6-658P-201ENST00000384606 106 ntBASIC-0.1□□□□□ -2.43
CACNA1AO00555 RNU6-1031P-201ENST00000384773 107 ntBASIC-0.1□□□□□ -2.43
CACNA1AO00555 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC-0.1□□□□□ -2.43
CACNA1AO00555 AL451046.2-201ENST00000403074 277 ntBASIC-0.1□□□□□ -2.43
CACNA1AO00555 AL079342.2-201ENST00000403367 482 ntBASIC-0.1□□□□□ -2.43
CACNA1AO00555 UBE2D3P3-201ENST00000426992 425 ntBASIC-0.1□□□□□ -2.43
CACNA1AO00555 ZFAND6P1-201ENST00000434138 605 ntBASIC-0.1□□□□□ -2.43
CACNA1AO00555 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC-0.1□□□□□ -2.43
CACNA1AO00555 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC-0.1□□□□□ -2.43
CACNA1AO00555 AL031313.1-201ENST00000448435 256 ntBASIC-0.1□□□□□ -2.43
CACNA1AO00555 MTND1P31-201ENST00000449206 961 ntBASIC-0.1□□□□□ -2.43
CACNA1AO00555 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC-0.1□□□□□ -2.43
CACNA1AO00555 snoU13.30-201ENST00000458951 104 ntBASIC-0.1□□□□□ -2.43
CACNA1AO00555 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC-0.1□□□□□ -2.43
CACNA1AO00555 AC113410.1-201ENST00000505029 247 ntBASIC-0.1□□□□□ -2.43
CACNA1AO00555 AC104136.1-201ENST00000512969 394 ntBASIC-0.1□□□□□ -2.43
CACNA1AO00555 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC-0.1□□□□□ -2.43
CACNA1AO00555 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC-0.1□□□□□ -2.43
CACNA1AO00555 AL139286.2-201ENST00000606838 396 ntBASIC-0.1□□□□□ -2.43
CACNA1AO00555 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC-0.1□□□□□ -2.43
CACNA1AO00555 TUG1_2.1-201ENST00000614234 87 ntBASIC-0.1□□□□□ -2.43
CACNA1AO00555 AC063943.3-201ENST00000615562 356 ntBASIC-0.1□□□□□ -2.43
CACNA1AO00555 MIR8054-201ENST00000620877 86 ntBASIC-0.1□□□□□ -2.43
CACNA1AO00555 SNORD3E-202ENST00000627253 216 ntBASIC-0.1□□□□□ -2.43
CACNA1AO00555 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC-0.1□□□□□ -2.43
CACNA1AO00555 Y_RNA.150-201ENST00000363562 102 ntBASIC-0.11□□□□□ -2.43
CACNA1AO00555 SNORD56.4-201ENST00000363883 71 ntBASIC-0.11□□□□□ -2.43
CACNA1AO00555 RNY4P16-201ENST00000364768 94 ntBASIC-0.11□□□□□ -2.43
CACNA1AO00555 Y_RNA.480-201ENST00000384364 102 ntBASIC-0.11□□□□□ -2.43
CACNA1AO00555 RNU6-929P-201ENST00000384429 107 ntBASIC-0.11□□□□□ -2.43
CACNA1AO00555 RNU6-564P-201ENST00000410983 104 ntBASIC-0.11□□□□□ -2.43
CACNA1AO00555 BTF3L4P1-201ENST00000413813 468 ntBASIC-0.11□□□□□ -2.43
CACNA1AO00555 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC-0.11□□□□□ -2.43
CACNA1AO00555 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC-0.11□□□□□ -2.43
CACNA1AO00555 RPL23AP50-201ENST00000434149 455 ntBASIC-0.11□□□□□ -2.43
CACNA1AO00555 FABP5P4-201ENST00000437203 171 ntBASIC-0.11□□□□□ -2.43
CACNA1AO00555 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC-0.11□□□□□ -2.43
CACNA1AO00555 HGF-207ENST00000453018 721 ntTSL 3 BASIC-0.11□□□□□ -2.43
CACNA1AO00555 RPL39P39-201ENST00000455840 151 ntBASIC-0.11□□□□□ -2.43
CACNA1AO00555 RPL39P38-201ENST00000467018 153 ntBASIC-0.11□□□□□ -2.43
CACNA1AO00555 RBBP4P6-201ENST00000508098 202 ntBASIC-0.11□□□□□ -2.43
CACNA1AO00555 MTND1P22-201ENST00000510572 951 ntBASIC-0.11□□□□□ -2.43
CACNA1AO00555 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC-0.11□□□□□ -2.43
CACNA1AO00555 AL929325.1-201ENST00000603096 117 ntBASIC-0.11□□□□□ -2.43
CACNA1AO00555 AC138749.5-201ENST00000611461 208 ntBASIC-0.11□□□□□ -2.43
CACNA1AO00555 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC-0.11□□□□□ -2.43
CACNA1AO00555 Y_RNA.326-201ENST00000365176 113 ntBASIC-0.11□□□□□ -2.43
CACNA1AO00555 RNU6-843P-201ENST00000384454 104 ntBASIC-0.11□□□□□ -2.43
CACNA1AO00555 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC-0.11□□□□□ -2.43
CACNA1AO00555 AL590084.2-201ENST00000401481 382 ntBASIC-0.11□□□□□ -2.43
CACNA1AO00555 RPS20P2-201ENST00000402520 389 ntBASIC-0.11□□□□□ -2.43
CACNA1AO00555 RNU4-22P-201ENST00000411058 166 ntBASIC-0.11□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms