Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 Y_RNA.595-201ENST00000410403 105 ntBASIC3.41□□□□□ -1.86
CCDC85CA6NKD9 AC004866.1-201ENST00000411748 78 ntBASIC3.41□□□□□ -1.86
CCDC85CA6NKD9 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC85CA6NKD9 AL445305.1-201ENST00000432577 575 ntBASIC3.41□□□□□ -1.86
CCDC85CA6NKD9 HMGN2P3-201ENST00000433603 273 ntBASIC3.41□□□□□ -1.86
CCDC85CA6NKD9 HMGN2P5-201ENST00000436882 273 ntBASIC3.41□□□□□ -1.86
CCDC85CA6NKD9 DYNLT3P2-201ENST00000442517 295 ntBASIC3.41□□□□□ -1.86
CCDC85CA6NKD9 AC023141.11-201ENST00000508864 202 ntBASIC3.41□□□□□ -1.86
CCDC85CA6NKD9 RNU6-397P-201ENST00000516226 104 ntBASIC3.41□□□□□ -1.86
CCDC85CA6NKD9 RNU6-586P-201ENST00000517265 104 ntBASIC3.41□□□□□ -1.86
CCDC85CA6NKD9 TGIF1P1-201ENST00000558095 802 ntBASIC3.41□□□□□ -1.86
CCDC85CA6NKD9 MIR4648-201ENST00000580107 72 ntBASIC3.41□□□□□ -1.86
CCDC85CA6NKD9 MIR3149-201ENST00000584629 83 ntBASIC3.41□□□□□ -1.86
CCDC85CA6NKD9 MIR4781-201ENST00000585250 76 ntBASIC3.41□□□□□ -1.86
CCDC85CA6NKD9 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC85CA6NKD9 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
CCDC85CA6NKD9 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.41□□□□□ -1.86
CCDC85CA6NKD9 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC85CA6NKD9 MTND5P35-201ENST00000557537 1720 ntBASIC3.41□□□□□ -1.86
CCDC85CA6NKD9 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC85CA6NKD9 SNORD63-201ENST00000384262 68 ntBASIC3.4□□□□□ -1.87
CCDC85CA6NKD9 Y_RNA.462-201ENST00000384268 102 ntBASIC3.4□□□□□ -1.87
CCDC85CA6NKD9 RNU1-89P-201ENST00000384592 164 ntBASIC3.4□□□□□ -1.87
CCDC85CA6NKD9 SNORA67.4-201ENST00000384688 142 ntBASIC3.4□□□□□ -1.87
CCDC85CA6NKD9 SNORD115-46-201ENST00000390982 71 ntBASIC3.4□□□□□ -1.87
CCDC85CA6NKD9 SNORA12-201ENST00000391162 147 ntBASIC3.4□□□□□ -1.87
CCDC85CA6NKD9 RHEBP3-201ENST00000411920 351 ntBASIC3.4□□□□□ -1.87
CCDC85CA6NKD9 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.4□□□□□ -1.87
CCDC85CA6NKD9 AC004386.2-201ENST00000441858 148 ntBASIC3.4□□□□□ -1.87
CCDC85CA6NKD9 LINC01399-202ENST00000458450 244 ntBASIC3.4□□□□□ -1.87
CCDC85CA6NKD9 SNORA40.9-201ENST00000515895 93 ntBASIC3.4□□□□□ -1.87
CCDC85CA6NKD9 RNA5SP148-201ENST00000516527 94 ntBASIC3.4□□□□□ -1.87
CCDC85CA6NKD9 MIR4423-201ENST00000580922 80 ntBASIC3.4□□□□□ -1.87
CCDC85CA6NKD9 MZT1P2-201ENST00000604387 248 ntBASIC3.4□□□□□ -1.87
CCDC85CA6NKD9 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.4□□□□□ -1.87
CCDC85CA6NKD9 MIR5739-201ENST00000619803 80 ntBASIC3.4□□□□□ -1.87
CCDC85CA6NKD9 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CCDC85CA6NKD9 LINC02555-201ENST00000563933 1951 ntBASIC3.4□□□□□ -1.87
CCDC85CA6NKD9 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CCDC85CA6NKD9 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
CCDC85CA6NKD9 Y_RNA.19-201ENST00000362462 99 ntBASIC3.39□□□□□ -1.87
CCDC85CA6NKD9 RNA5SP322-201ENST00000363617 119 ntBASIC3.39□□□□□ -1.87
CCDC85CA6NKD9 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
CCDC85CA6NKD9 RNU6-26P-201ENST00000383985 107 ntBASIC3.39□□□□□ -1.87
CCDC85CA6NKD9 MIR549A-201ENST00000385268 96 ntBASIC3.39□□□□□ -1.87
CCDC85CA6NKD9 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
CCDC85CA6NKD9 Y_RNA.597-201ENST00000410463 100 ntBASIC3.39□□□□□ -1.87
CCDC85CA6NKD9 RNU6-121P-201ENST00000410525 99 ntBASIC3.39□□□□□ -1.87
CCDC85CA6NKD9 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC85CA6NKD9 AC027124.2-201ENST00000428249 105 ntBASIC3.39□□□□□ -1.87
CCDC85CA6NKD9 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC85CA6NKD9 PCNPP5-201ENST00000452246 481 ntBASIC3.39□□□□□ -1.87
CCDC85CA6NKD9 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.39□□□□□ -1.87
CCDC85CA6NKD9 AC108729.3-201ENST00000513484 108 ntBASIC3.39□□□□□ -1.87
CCDC85CA6NKD9 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.39□□□□□ -1.87
CCDC85CA6NKD9 AC136932.1-201ENST00000574771 208 ntBASIC3.39□□□□□ -1.87
CCDC85CA6NKD9 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.39□□□□□ -1.87
CCDC85CA6NKD9 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC85CA6NKD9 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.39□□□□□ -1.87
CCDC85CA6NKD9 AL357075.2-201ENST00000614906 189 ntBASIC3.39□□□□□ -1.87
CCDC85CA6NKD9 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.39□□□□□ -1.87
CCDC85CA6NKD9 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC85CA6NKD9 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.39□□□□□ -1.87
CCDC85CA6NKD9 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC85CA6NKD9 RNU6-859P-201ENST00000362728 107 ntBASIC3.38□□□□□ -1.87
CCDC85CA6NKD9 Y_RNA.105-201ENST00000363182 111 ntBASIC3.38□□□□□ -1.87
CCDC85CA6NKD9 RNU6-238P-201ENST00000363313 106 ntBASIC3.38□□□□□ -1.87
CCDC85CA6NKD9 Y_RNA.193-201ENST00000363979 102 ntBASIC3.38□□□□□ -1.87
CCDC85CA6NKD9 SNORA18.2-201ENST00000383865 132 ntBASIC3.38□□□□□ -1.87
CCDC85CA6NKD9 RNU6-713P-201ENST00000384761 107 ntBASIC3.38□□□□□ -1.87
CCDC85CA6NKD9 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.38□□□□□ -1.87
CCDC85CA6NKD9 AC104332.2-201ENST00000429959 156 ntBASIC3.38□□□□□ -1.87
CCDC85CA6NKD9 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.38□□□□□ -1.87
CCDC85CA6NKD9 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.38□□□□□ -1.87
CCDC85CA6NKD9 RNU6-1053P-201ENST00000515930 101 ntBASIC3.38□□□□□ -1.87
CCDC85CA6NKD9 Y_RNA.668-201ENST00000516233 93 ntBASIC3.38□□□□□ -1.87
CCDC85CA6NKD9 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC85CA6NKD9 AK6P2-201ENST00000549020 471 ntBASIC3.38□□□□□ -1.87
CCDC85CA6NKD9 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.38□□□□□ -1.87
CCDC85CA6NKD9 AL356280.1-201ENST00000603614 379 ntBASIC3.38□□□□□ -1.87
CCDC85CA6NKD9 AC011476.5-201ENST00000615594 130 ntBASIC3.38□□□□□ -1.87
CCDC85CA6NKD9 AC008873.1-201ENST00000625051 138 ntBASIC3.38□□□□□ -1.87
CCDC85CA6NKD9 AC090517.3-201ENST00000625170 141 ntBASIC3.38□□□□□ -1.87
CCDC85CA6NKD9 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.38□□□□□ -1.87
CCDC85CA6NKD9 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC85CA6NKD9 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.38□□□□□ -1.87
CCDC85CA6NKD9 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC85CA6NKD9 MIR410-201ENST00000362222 80 ntBASIC3.37□□□□□ -1.87
CCDC85CA6NKD9 Y_RNA.26-201ENST00000362539 101 ntBASIC3.37□□□□□ -1.87
CCDC85CA6NKD9 RNU6-944P-201ENST00000364023 107 ntBASIC3.37□□□□□ -1.87
CCDC85CA6NKD9 RNU6-574P-201ENST00000384265 107 ntBASIC3.37□□□□□ -1.87
CCDC85CA6NKD9 RNU6-472P-201ENST00000384299 107 ntBASIC3.37□□□□□ -1.87
CCDC85CA6NKD9 RNU6-851P-201ENST00000384565 107 ntBASIC3.37□□□□□ -1.87
CCDC85CA6NKD9 RNU6-220P-201ENST00000390919 107 ntBASIC3.37□□□□□ -1.87
CCDC85CA6NKD9 AC006539.3-201ENST00000454258 129 ntBASIC3.37□□□□□ -1.87
CCDC85CA6NKD9 CYP2C59P-201ENST00000457790 269 ntBASIC3.37□□□□□ -1.87
CCDC85CA6NKD9 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.37□□□□□ -1.87
CCDC85CA6NKD9 RNY3P15-201ENST00000516297 97 ntBASIC3.37□□□□□ -1.87
CCDC85CA6NKD9 SNORA70.19-201ENST00000516717 90 ntBASIC3.37□□□□□ -1.87
CCDC85CA6NKD9 SNORA48.11-201ENST00000517015 89 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms