Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.5□□□□□ -1.85
UBP1Q9NZI7 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
UBP1Q9NZI7 Z82209.1-201ENST00000422141 2135 ntBASIC3.5□□□□□ -1.85
UBP1Q9NZI7 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.5□□□□□ -1.85
UBP1Q9NZI7 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
UBP1Q9NZI7 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
UBP1Q9NZI7 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
UBP1Q9NZI7 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
UBP1Q9NZI7 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
UBP1Q9NZI7 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
UBP1Q9NZI7 MIR30E-201ENST00000362104 92 ntBASIC3.49□□□□□ -1.85
UBP1Q9NZI7 RNU4-35P-201ENST00000362588 141 ntBASIC3.49□□□□□ -1.85
UBP1Q9NZI7 SNORA68.1-201ENST00000364537 132 ntBASIC3.49□□□□□ -1.85
UBP1Q9NZI7 Y_RNA.270-201ENST00000364693 104 ntBASIC3.49□□□□□ -1.85
UBP1Q9NZI7 RNU6-1062P-201ENST00000383908 107 ntBASIC3.49□□□□□ -1.85
UBP1Q9NZI7 SNORD17-201ENST00000390930 237 ntBASIC3.49□□□□□ -1.85
UBP1Q9NZI7 PTMAP2-201ENST00000397627 327 ntBASIC3.49□□□□□ -1.85
UBP1Q9NZI7 MIR300-201ENST00000401138 83 ntBASIC3.49□□□□□ -1.85
UBP1Q9NZI7 U3.40-201ENST00000408706 208 ntBASIC3.49□□□□□ -1.85
UBP1Q9NZI7 RPS29P4-201ENST00000414733 161 ntBASIC3.49□□□□□ -1.85
UBP1Q9NZI7 RPS29P12-201ENST00000460178 152 ntBASIC3.49□□□□□ -1.85
UBP1Q9NZI7 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.49□□□□□ -1.85
UBP1Q9NZI7 SNORD116-28-201ENST00000516123 91 ntBASIC3.49□□□□□ -1.85
UBP1Q9NZI7 SCARNA3-201ENST00000517097 143 ntBASIC3.49□□□□□ -1.85
UBP1Q9NZI7 RNU6-586P-201ENST00000517265 104 ntBASIC3.49□□□□□ -1.85
UBP1Q9NZI7 AC026403.1-201ENST00000518938 295 ntBASIC3.49□□□□□ -1.85
UBP1Q9NZI7 MIR3684-201ENST00000579779 74 ntBASIC3.49□□□□□ -1.85
UBP1Q9NZI7 AC010620.2-201ENST00000600135 313 ntBASIC3.49□□□□□ -1.85
UBP1Q9NZI7 DEFB117-201ENST00000602356 141 ntBASIC3.49□□□□□ -1.85
UBP1Q9NZI7 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.49□□□□□ -1.85
UBP1Q9NZI7 Y_RNA.180-201ENST00000363867 113 ntBASIC3.48□□□□□ -1.85
UBP1Q9NZI7 RNU6-324P-201ENST00000363957 106 ntBASIC3.48□□□□□ -1.85
UBP1Q9NZI7 RNU6-1305P-201ENST00000364353 104 ntBASIC3.48□□□□□ -1.85
UBP1Q9NZI7 Y_RNA.329-201ENST00000365209 107 ntBASIC3.48□□□□□ -1.85
UBP1Q9NZI7 RNU6-662P-201ENST00000384253 104 ntBASIC3.48□□□□□ -1.85
UBP1Q9NZI7 RNU6-1274P-201ENST00000384557 107 ntBASIC3.48□□□□□ -1.85
UBP1Q9NZI7 MIR218-2-201ENST00000385006 110 ntBASIC3.48□□□□□ -1.85
UBP1Q9NZI7 RPL30P4-201ENST00000429309 333 ntBASIC3.48□□□□□ -1.85
UBP1Q9NZI7 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.48□□□□□ -1.85
UBP1Q9NZI7 AC074290.1-201ENST00000448883 135 ntBASIC3.48□□□□□ -1.85
UBP1Q9NZI7 SUMO1P2-201ENST00000452524 304 ntBASIC3.48□□□□□ -1.85
UBP1Q9NZI7 RBMY2UP-201ENST00000453474 324 ntBASIC3.48□□□□□ -1.85
UBP1Q9NZI7 RNU7-120P-201ENST00000459334 63 ntBASIC3.48□□□□□ -1.85
UBP1Q9NZI7 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
UBP1Q9NZI7 RNU6-436P-201ENST00000516171 114 ntBASIC3.48□□□□□ -1.85
UBP1Q9NZI7 RNU6-1098P-201ENST00000516772 96 ntBASIC3.48□□□□□ -1.85
UBP1Q9NZI7 RN7SKP40-201ENST00000517211 242 ntBASIC3.48□□□□□ -1.85
UBP1Q9NZI7 AP005660.1-201ENST00000522972 293 ntBASIC3.48□□□□□ -1.85
UBP1Q9NZI7 AC024405.2-202ENST00000532731 184 ntBASIC3.48□□□□□ -1.85
UBP1Q9NZI7 AC018630.3-201ENST00000542637 96 ntBASIC3.48□□□□□ -1.85
UBP1Q9NZI7 MIR3145-201ENST00000580727 82 ntBASIC3.48□□□□□ -1.85
UBP1Q9NZI7 AL713866.2-201ENST00000603579 219 ntBASIC3.48□□□□□ -1.85
UBP1Q9NZI7 AC011921.3-201ENST00000605540 361 ntBASIC3.48□□□□□ -1.85
UBP1Q9NZI7 RNVU1-4-201ENST00000612985 164 ntBASIC3.48□□□□□ -1.85
UBP1Q9NZI7 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
UBP1Q9NZI7 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
UBP1Q9NZI7 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
UBP1Q9NZI7 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
UBP1Q9NZI7 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.48□□□□□ -1.85
UBP1Q9NZI7 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
UBP1Q9NZI7 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
UBP1Q9NZI7 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.47□□□□□ -1.85
UBP1Q9NZI7 RNU1-72P-201ENST00000362976 153 ntBASIC3.47□□□□□ -1.85
UBP1Q9NZI7 Y_RNA.243-201ENST00000364481 109 ntBASIC3.47□□□□□ -1.85
UBP1Q9NZI7 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
UBP1Q9NZI7 AL357075.1-201ENST00000404107 726 ntBASIC3.47□□□□□ -1.85
UBP1Q9NZI7 RNU6-651P-201ENST00000411040 105 ntBASIC3.47□□□□□ -1.85
UBP1Q9NZI7 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.47□□□□□ -1.85
UBP1Q9NZI7 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.47□□□□□ -1.85
UBP1Q9NZI7 AC080013.2-201ENST00000460866 323 ntBASIC3.47□□□□□ -1.85
UBP1Q9NZI7 RPS29P26-201ENST00000477483 171 ntBASIC3.47□□□□□ -1.85
UBP1Q9NZI7 AC026784.1-201ENST00000507986 352 ntBASIC3.47□□□□□ -1.85
UBP1Q9NZI7 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.47□□□□□ -1.85
UBP1Q9NZI7 MIR2276-201ENST00000516886 89 ntBASIC3.47□□□□□ -1.85
UBP1Q9NZI7 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.47□□□□□ -1.85
UBP1Q9NZI7 AP002392.1-201ENST00000537692 208 ntBASIC3.47□□□□□ -1.85
UBP1Q9NZI7 AC105245.1-201ENST00000581934 244 ntBASIC3.47□□□□□ -1.85
UBP1Q9NZI7 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.47□□□□□ -1.85
UBP1Q9NZI7 AC069294.1-201ENST00000608397 350 ntBASIC3.47□□□□□ -1.85
UBP1Q9NZI7 MIR7851-201ENST00000610611 160 ntBASIC3.47□□□□□ -1.85
UBP1Q9NZI7 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
UBP1Q9NZI7 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.47□□□□□ -1.85
UBP1Q9NZI7 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.47□□□□□ -1.85
UBP1Q9NZI7 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
UBP1Q9NZI7 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
UBP1Q9NZI7 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
UBP1Q9NZI7 SNORD115-30-201ENST00000364117 82 ntBASIC3.46□□□□□ -1.86
UBP1Q9NZI7 SNORA51.4-201ENST00000364993 124 ntBASIC3.46□□□□□ -1.86
UBP1Q9NZI7 MIR184-201ENST00000384962 84 ntBASIC3.46□□□□□ -1.86
UBP1Q9NZI7 RNU6-710P-201ENST00000410424 105 ntBASIC3.46□□□□□ -1.86
UBP1Q9NZI7 RNU6-1328P-201ENST00000410938 106 ntBASIC3.46□□□□□ -1.86
UBP1Q9NZI7 AC104332.1-201ENST00000440471 797 ntBASIC3.46□□□□□ -1.86
UBP1Q9NZI7 AC114982.1-201ENST00000469402 321 ntBASIC3.46□□□□□ -1.86
UBP1Q9NZI7 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.46□□□□□ -1.86
UBP1Q9NZI7 IGKV2-26-201ENST00000518305 343 ntBASIC3.46□□□□□ -1.86
UBP1Q9NZI7 MIR4425-201ENST00000580572 84 ntBASIC3.46□□□□□ -1.86
UBP1Q9NZI7 AC034229.5-201ENST00000624258 185 ntBASIC3.46□□□□□ -1.86
UBP1Q9NZI7 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
UBP1Q9NZI7 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.46□□□□□ -1.86
UBP1Q9NZI7 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 175.2 ms