Protein–RNA interactions for Protein: Q9NYV4

CDK12, Cyclin-dependent kinase 12, humanhuman

Predicted RBP Predictions only

Length 1,490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12Q9NYV4 RNU6-856P-201ENST00000516959 98 ntBASIC0.1□□□□□ -2.39
CDK12Q9NYV4 AP002453.2-201ENST00000533503 320 ntBASIC0.1□□□□□ -2.39
CDK12Q9NYV4 ZNF321P-202ENST00000550843 495 ntBASIC0.1□□□□□ -2.39
CDK12Q9NYV4 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.1□□□□□ -2.39
CDK12Q9NYV4 MIR3146-201ENST00000580367 79 ntBASIC0.1□□□□□ -2.39
CDK12Q9NYV4 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC0.1□□□□□ -2.39
CDK12Q9NYV4 DEFB131E-202ENST00000602581 683 ntBASIC0.1□□□□□ -2.39
CDK12Q9NYV4 RPL17P51-201ENST00000605218 238 ntBASIC0.1□□□□□ -2.39
CDK12Q9NYV4 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC0.1□□□□□ -2.39
CDK12Q9NYV4 AL359547.2-201ENST00000615810 418 ntBASIC0.1□□□□□ -2.39
CDK12Q9NYV4 AC103706.2-201ENST00000638080 240 ntBASIC0.1□□□□□ -2.39
CDK12Q9NYV4 AC006927.4-201ENST00000639187 543 ntBASIC0.1□□□□□ -2.39
CDK12Q9NYV4 BX322639.1-202ENST00000423987 2213 ntBASIC0.09□□□□□ -2.39
CDK12Q9NYV4 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.09□□□□□ -2.39
CDK12Q9NYV4 RNU6-349P-201ENST00000362402 107 ntBASIC0.09□□□□□ -2.4
CDK12Q9NYV4 RNU6-511P-201ENST00000363496 107 ntBASIC0.09□□□□□ -2.4
CDK12Q9NYV4 RNU6-560P-201ENST00000364007 108 ntBASIC0.09□□□□□ -2.4
CDK12Q9NYV4 Y_RNA.311-201ENST00000365068 96 ntBASIC0.09□□□□□ -2.4
CDK12Q9NYV4 RNU6-609P-201ENST00000365459 107 ntBASIC0.09□□□□□ -2.4
CDK12Q9NYV4 RNU4-48P-201ENST00000365559 182 ntBASIC0.09□□□□□ -2.4
CDK12Q9NYV4 RNU6-378P-201ENST00000384324 107 ntBASIC0.09□□□□□ -2.4
CDK12Q9NYV4 SNORD89-201ENST00000390981 114 ntBASIC0.09□□□□□ -2.4
CDK12Q9NYV4 RPS20P2-201ENST00000402520 389 ntBASIC0.09□□□□□ -2.4
CDK12Q9NYV4 PDCL2P1-201ENST00000419302 352 ntBASIC0.09□□□□□ -2.4
CDK12Q9NYV4 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.09□□□□□ -2.4
CDK12Q9NYV4 AL049829.1-201ENST00000465411 156 ntBASIC0.09□□□□□ -2.4
CDK12Q9NYV4 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC0.09□□□□□ -2.4
CDK12Q9NYV4 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.09□□□□□ -2.4
CDK12Q9NYV4 AC093027.1-201ENST00000546698 429 ntBASIC0.09□□□□□ -2.4
CDK12Q9NYV4 AC080078.2-201ENST00000603766 501 ntBASIC0.09□□□□□ -2.4
CDK12Q9NYV4 AC092268.1-201ENST00000342691 405 ntBASIC0.08□□□□□ -2.4
CDK12Q9NYV4 RNU6-462P-201ENST00000362659 105 ntBASIC0.08□□□□□ -2.4
CDK12Q9NYV4 RNY3-201ENST00000365484 102 ntBASIC0.08□□□□□ -2.4
CDK12Q9NYV4 MIR578-201ENST00000384828 96 ntBASIC0.08□□□□□ -2.4
CDK12Q9NYV4 RNA5SP109-201ENST00000391010 116 ntBASIC0.08□□□□□ -2.4
CDK12Q9NYV4 RNA5SP467-201ENST00000391274 118 ntBASIC0.08□□□□□ -2.4
CDK12Q9NYV4 AC078809.1-201ENST00000427601 140 ntBASIC0.08□□□□□ -2.4
CDK12Q9NYV4 AC010975.2-201ENST00000427781 588 ntBASIC0.08□□□□□ -2.4
CDK12Q9NYV4 AC244670.1-201ENST00000436879 112 ntBASIC0.08□□□□□ -2.4
CDK12Q9NYV4 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.08□□□□□ -2.4
CDK12Q9NYV4 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC0.08□□□□□ -2.4
CDK12Q9NYV4 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.08□□□□□ -2.4
CDK12Q9NYV4 HMGB1P29-201ENST00000505659 499 ntBASIC0.08□□□□□ -2.4
CDK12Q9NYV4 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.08□□□□□ -2.4
CDK12Q9NYV4 RNU1-86P-201ENST00000516108 154 ntBASIC0.08□□□□□ -2.4
CDK12Q9NYV4 RNU1-107P-201ENST00000516617 154 ntBASIC0.08□□□□□ -2.4
CDK12Q9NYV4 RNU6-334P-201ENST00000517072 102 ntBASIC0.08□□□□□ -2.4
CDK12Q9NYV4 MIR5697-201ENST00000578045 78 ntBASIC0.08□□□□□ -2.4
CDK12Q9NYV4 AC092354.1-201ENST00000606057 376 ntBASIC0.08□□□□□ -2.4
CDK12Q9NYV4 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC0.08□□□□□ -2.4
CDK12Q9NYV4 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC0.08□□□□□ -2.4
CDK12Q9NYV4 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC0.08□□□□□ -2.4
CDK12Q9NYV4 U4.7-201ENST00000638126 106 ntBASIC0.08□□□□□ -2.4
CDK12Q9NYV4 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.07□□□□□ -2.4
CDK12Q9NYV4 RNU6-78P-201ENST00000362897 107 ntBASIC0.07□□□□□ -2.4
CDK12Q9NYV4 SNORA72.2-201ENST00000365028 127 ntBASIC0.07□□□□□ -2.4
CDK12Q9NYV4 RNU5E-7P-201ENST00000365290 117 ntBASIC0.07□□□□□ -2.4
CDK12Q9NYV4 RNU6-1327P-201ENST00000365302 105 ntBASIC0.07□□□□□ -2.4
CDK12Q9NYV4 MIR1295A-201ENST00000408463 79 ntBASIC0.07□□□□□ -2.4
CDK12Q9NYV4 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.07□□□□□ -2.4
CDK12Q9NYV4 RNU6-948P-201ENST00000516374 107 ntBASIC0.07□□□□□ -2.4
CDK12Q9NYV4 MTND2P7-201ENST00000521337 640 ntBASIC0.07□□□□□ -2.4
CDK12Q9NYV4 AC011979.2-201ENST00000527568 352 ntBASIC0.07□□□□□ -2.4
CDK12Q9NYV4 AC090049.2-201ENST00000550377 109 ntBASIC0.07□□□□□ -2.4
CDK12Q9NYV4 Z98751.3-201ENST00000604447 521 ntBASIC0.07□□□□□ -2.4
CDK12Q9NYV4 AP002802.2-201ENST00000605877 235 ntBASIC0.07□□□□□ -2.4
CDK12Q9NYV4 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC0.07□□□□□ -2.4
CDK12Q9NYV4 RNU6-1141P-201ENST00000364520 107 ntBASIC0.06□□□□□ -2.4
CDK12Q9NYV4 RNU4-56P-201ENST00000364700 142 ntBASIC0.06□□□□□ -2.4
CDK12Q9NYV4 RNU6-163P-201ENST00000384396 106 ntBASIC0.06□□□□□ -2.4
CDK12Q9NYV4 SNORD116-13-201ENST00000384408 92 ntBASIC0.06□□□□□ -2.4
CDK12Q9NYV4 SNORA40.2-201ENST00000390847 128 ntBASIC0.06□□□□□ -2.4
CDK12Q9NYV4 RNU6-293P-201ENST00000411259 106 ntBASIC0.06□□□□□ -2.4
CDK12Q9NYV4 AC114491.1-201ENST00000416095 246 ntBASIC0.06□□□□□ -2.4
CDK12Q9NYV4 AL590135.1-201ENST00000422215 156 ntBASIC0.06□□□□□ -2.4
CDK12Q9NYV4 AC019205.3-201ENST00000424573 156 ntBASIC0.06□□□□□ -2.4
CDK12Q9NYV4 AC244098.3-201ENST00000424803 96 ntBASIC0.06□□□□□ -2.4
CDK12Q9NYV4 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.06□□□□□ -2.4
CDK12Q9NYV4 AL606517.2-201ENST00000442855 241 ntBASIC0.06□□□□□ -2.4
CDK12Q9NYV4 AC016700.2-201ENST00000446011 156 ntBASIC0.06□□□□□ -2.4
CDK12Q9NYV4 NFU1P2-201ENST00000448700 469 ntBASIC0.06□□□□□ -2.4
CDK12Q9NYV4 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC0.06□□□□□ -2.4
CDK12Q9NYV4 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC0.06□□□□□ -2.4
CDK12Q9NYV4 AL163973.1-201ENST00000484753 577 ntBASIC0.06□□□□□ -2.4
CDK12Q9NYV4 AC015911.1-201ENST00000495111 156 ntBASIC0.06□□□□□ -2.4
CDK12Q9NYV4 SNORA68.3-201ENST00000515906 83 ntBASIC0.06□□□□□ -2.4
CDK12Q9NYV4 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC0.06□□□□□ -2.4
CDK12Q9NYV4 MIR548AX-201ENST00000580117 73 ntBASIC0.06□□□□□ -2.4
CDK12Q9NYV4 MIR548AC-201ENST00000585049 88 ntBASIC0.06□□□□□ -2.4
CDK12Q9NYV4 AL390123.1-201ENST00000603216 237 ntBASIC0.06□□□□□ -2.4
CDK12Q9NYV4 MTATP6P2-201ENST00000603319 678 ntBASIC0.06□□□□□ -2.4
CDK12Q9NYV4 AL603839.4-201ENST00000624658 1005 ntBASIC0.06□□□□□ -2.4
CDK12Q9NYV4 MTND4P5-201ENST00000435821 1374 ntBASIC0.06□□□□□ -2.4
CDK12Q9NYV4 RNU6-417P-201ENST00000384712 107 ntBASIC0.05□□□□□ -2.4
CDK12Q9NYV4 MIR153-2-201ENST00000385225 87 ntBASIC0.05□□□□□ -2.4
CDK12Q9NYV4 RNU6-440P-201ENST00000390882 105 ntBASIC0.05□□□□□ -2.4
CDK12Q9NYV4 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
CDK12Q9NYV4 RNU6-1245P-201ENST00000411130 106 ntBASIC0.05□□□□□ -2.4
CDK12Q9NYV4 MTND4P3-201ENST00000417829 541 ntBASIC0.05□□□□□ -2.4
CDK12Q9NYV4 RPL23AP50-201ENST00000434149 455 ntBASIC0.05□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms