Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RNF39Q9H2S5 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
RNF39Q9H2S5 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.59□□□□□ -1.51
RNF39Q9H2S5 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
RNF39Q9H2S5 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RNF39Q9H2S5 RNU2-63P-201ENST00000410792 194 ntBASIC5.59□□□□□ -1.51
RNF39Q9H2S5 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC5.59□□□□□ -1.51
RNF39Q9H2S5 RN7SL197P-201ENST00000466981 299 ntBASIC5.59□□□□□ -1.51
RNF39Q9H2S5 IGLV2-34-201ENST00000490007 283 ntBASIC5.59□□□□□ -1.51
RNF39Q9H2S5 AC133485.1-201ENST00000567176 124 ntBASIC5.59□□□□□ -1.51
RNF39Q9H2S5 AC090897.1-201ENST00000580909 226 ntBASIC5.59□□□□□ -1.51
RNF39Q9H2S5 FAM25E-202ENST00000608562 189 ntBASIC5.59□□□□□ -1.51
RNF39Q9H2S5 AC091953.3-201ENST00000623220 236 ntBASIC5.59□□□□□ -1.51
RNF39Q9H2S5 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
RNF39Q9H2S5 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RNF39Q9H2S5 MFSD8-242ENST00000641690 4199 ntBASIC5.59□□□□□ -1.51
RNF39Q9H2S5 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
RNF39Q9H2S5 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
RNF39Q9H2S5 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
RNF39Q9H2S5 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
RNF39Q9H2S5 SNORA70.6-201ENST00000383934 134 ntBASIC5.58□□□□□ -1.52
RNF39Q9H2S5 SNORA24-201ENST00000384096 131 ntBASIC5.58□□□□□ -1.52
RNF39Q9H2S5 MIR518E-201ENST00000385252 88 ntBASIC5.58□□□□□ -1.52
RNF39Q9H2S5 RPL18P10-201ENST00000425606 538 ntBASIC5.58□□□□□ -1.52
RNF39Q9H2S5 RN7SL814P-201ENST00000487715 300 ntBASIC5.58□□□□□ -1.52
RNF39Q9H2S5 RN7SL812P-201ENST00000493791 279 ntBASIC5.58□□□□□ -1.52
RNF39Q9H2S5 AC008033.2-201ENST00000542626 177 ntBASIC5.58□□□□□ -1.52
RNF39Q9H2S5 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.58□□□□□ -1.52
RNF39Q9H2S5 MIR4480-201ENST00000582492 71 ntBASIC5.58□□□□□ -1.52
RNF39Q9H2S5 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.58□□□□□ -1.52
RNF39Q9H2S5 AC087385.3-201ENST00000620477 187 ntBASIC5.58□□□□□ -1.52
RNF39Q9H2S5 AC091905.4-201ENST00000623432 202 ntBASIC5.58□□□□□ -1.52
RNF39Q9H2S5 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RNF39Q9H2S5 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RNF39Q9H2S5 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RNF39Q9H2S5 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.58□□□□□ -1.52
RNF39Q9H2S5 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RNF39Q9H2S5 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RNF39Q9H2S5 PTER-201ENST00000298942 3448 ntTSL 5 BASIC5.58□□□□□ -1.52
RNF39Q9H2S5 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RNF39Q9H2S5 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC5.57□□□□□ -1.52
RNF39Q9H2S5 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
RNF39Q9H2S5 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
RNF39Q9H2S5 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RNF39Q9H2S5 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC5.57□□□□□ -1.52
RNF39Q9H2S5 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.57□□□□□ -1.52
RNF39Q9H2S5 AL596028.1-201ENST00000326971 197 ntBASIC5.57□□□□□ -1.52
RNF39Q9H2S5 RNU6-1312P-201ENST00000362425 108 ntBASIC5.57□□□□□ -1.52
RNF39Q9H2S5 RN7SKP103-201ENST00000363848 320 ntBASIC5.57□□□□□ -1.52
RNF39Q9H2S5 SNORA8-201ENST00000384574 139 ntBASIC5.57□□□□□ -1.52
RNF39Q9H2S5 MIR3934-201ENST00000579806 107 ntBASIC5.57□□□□□ -1.52
RNF39Q9H2S5 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RNF39Q9H2S5 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RNF39Q9H2S5 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RNF39Q9H2S5 AC007159.1-201ENST00000566529 4706 ntBASIC5.57□□□□□ -1.52
RNF39Q9H2S5 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RNF39Q9H2S5 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RNF39Q9H2S5 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
RNF39Q9H2S5 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RNF39Q9H2S5 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC5.56□□□□□ -1.52
RNF39Q9H2S5 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.56□□□□□ -1.52
RNF39Q9H2S5 AC140134.1-201ENST00000511830 3544 ntBASIC5.56□□□□□ -1.52
RNF39Q9H2S5 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
RNF39Q9H2S5 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RNF39Q9H2S5 PCAT14-202ENST00000627127 3935 ntBASIC5.56□□□□□ -1.52
RNF39Q9H2S5 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
RNF39Q9H2S5 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.56□□□□□ -1.52
RNF39Q9H2S5 RNA5SP479-201ENST00000364858 117 ntBASIC5.56□□□□□ -1.52
RNF39Q9H2S5 RNA5SP428-201ENST00000365129 132 ntBASIC5.56□□□□□ -1.52
RNF39Q9H2S5 RNU6-1051P-201ENST00000365471 102 ntBASIC5.56□□□□□ -1.52
RNF39Q9H2S5 BX323845.1-201ENST00000432417 179 ntBASIC5.56□□□□□ -1.52
RNF39Q9H2S5 AC103810.1-201ENST00000579873 453 ntBASIC5.56□□□□□ -1.52
RNF39Q9H2S5 uc_338.14-201ENST00000613162 166 ntBASIC5.56□□□□□ -1.52
RNF39Q9H2S5 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RNF39Q9H2S5 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RNF39Q9H2S5 AC093591.2-201ENST00000565254 3843 ntBASIC5.56□□□□□ -1.52
RNF39Q9H2S5 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RNF39Q9H2S5 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.56□□□□□ -1.52
RNF39Q9H2S5 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
RNF39Q9H2S5 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
RNF39Q9H2S5 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC5.56□□□□□ -1.52
RNF39Q9H2S5 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RNF39Q9H2S5 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RNF39Q9H2S5 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RNF39Q9H2S5 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
RNF39Q9H2S5 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
RNF39Q9H2S5 RN7SKP153-201ENST00000365026 316 ntBASIC5.55□□□□□ -1.52
RNF39Q9H2S5 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
RNF39Q9H2S5 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
RNF39Q9H2S5 HMGN1P33-201ENST00000432945 451 ntBASIC5.55□□□□□ -1.52
RNF39Q9H2S5 MRPS21P3-201ENST00000436696 262 ntBASIC5.55□□□□□ -1.52
RNF39Q9H2S5 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC5.55□□□□□ -1.52
RNF39Q9H2S5 RN7SKP260-201ENST00000516907 149 ntBASIC5.55□□□□□ -1.52
RNF39Q9H2S5 MIR7853-201ENST00000584820 132 ntBASIC5.55□□□□□ -1.52
RNF39Q9H2S5 MIR1248-201ENST00000629190 106 ntBASIC5.55□□□□□ -1.52
RNF39Q9H2S5 MFSD8-216ENST00000641147 4009 ntBASIC5.55□□□□□ -1.52
RNF39Q9H2S5 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.55□□□□□ -1.52
RNF39Q9H2S5 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RNF39Q9H2S5 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.55□□□□□ -1.52
RNF39Q9H2S5 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms