Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC3.37□□□□□ -1.87
TRIM55Q9BYV6 AK6P2-201ENST00000549020 471 ntBASIC3.37□□□□□ -1.87
TRIM55Q9BYV6 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.37□□□□□ -1.87
TRIM55Q9BYV6 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.37□□□□□ -1.87
TRIM55Q9BYV6 MIR4423-201ENST00000580922 80 ntBASIC3.37□□□□□ -1.87
TRIM55Q9BYV6 AC068205.3-201ENST00000636385 468 ntBASIC3.37□□□□□ -1.87
TRIM55Q9BYV6 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.37□□□□□ -1.87
TRIM55Q9BYV6 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
TRIM55Q9BYV6 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
TRIM55Q9BYV6 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.36□□□□□ -1.87
TRIM55Q9BYV6 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.36□□□□□ -1.87
TRIM55Q9BYV6 RNU1-23P-201ENST00000363361 144 ntBASIC3.36□□□□□ -1.87
TRIM55Q9BYV6 SNORD87-201ENST00000364849 89 ntBASIC3.36□□□□□ -1.87
TRIM55Q9BYV6 RNU6-234P-201ENST00000365229 104 ntBASIC3.36□□□□□ -1.87
TRIM55Q9BYV6 RNA5SP240-201ENST00000365355 128 ntBASIC3.36□□□□□ -1.87
TRIM55Q9BYV6 Y_RNA.401-201ENST00000383965 117 ntBASIC3.36□□□□□ -1.87
TRIM55Q9BYV6 Y_RNA.483-201ENST00000384380 101 ntBASIC3.36□□□□□ -1.87
TRIM55Q9BYV6 Y_RNA.498-201ENST00000384460 102 ntBASIC3.36□□□□□ -1.87
TRIM55Q9BYV6 SNORA48.2-201ENST00000390926 124 ntBASIC3.36□□□□□ -1.87
TRIM55Q9BYV6 RNU2-63P-201ENST00000410792 194 ntBASIC3.36□□□□□ -1.87
TRIM55Q9BYV6 RNA5SP120-201ENST00000410900 112 ntBASIC3.36□□□□□ -1.87
TRIM55Q9BYV6 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.36□□□□□ -1.87
TRIM55Q9BYV6 RAB28P5-201ENST00000427490 651 ntBASIC3.36□□□□□ -1.87
TRIM55Q9BYV6 RBMY2UP-201ENST00000453474 324 ntBASIC3.36□□□□□ -1.87
TRIM55Q9BYV6 RNA5SP217-201ENST00000515959 91 ntBASIC3.36□□□□□ -1.87
TRIM55Q9BYV6 RNU6-965P-201ENST00000516721 96 ntBASIC3.36□□□□□ -1.87
TRIM55Q9BYV6 SNORA48.11-201ENST00000517015 89 ntBASIC3.36□□□□□ -1.87
TRIM55Q9BYV6 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
TRIM55Q9BYV6 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.35□□□□□ -1.87
TRIM55Q9BYV6 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.35□□□□□ -1.87
TRIM55Q9BYV6 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TRIM55Q9BYV6 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TRIM55Q9BYV6 RNU4-35P-201ENST00000362588 141 ntBASIC3.35□□□□□ -1.87
TRIM55Q9BYV6 snoU2_19.2-201ENST00000363024 80 ntBASIC3.35□□□□□ -1.87
TRIM55Q9BYV6 DYNLT3P1-201ENST00000378574 347 ntBASIC3.35□□□□□ -1.87
TRIM55Q9BYV6 SNORA67.2-201ENST00000384300 149 ntBASIC3.35□□□□□ -1.87
TRIM55Q9BYV6 MIR215-201ENST00000384858 110 ntBASIC3.35□□□□□ -1.87
TRIM55Q9BYV6 AC003685.2-201ENST00000422795 395 ntBASIC3.35□□□□□ -1.87
TRIM55Q9BYV6 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.35□□□□□ -1.87
TRIM55Q9BYV6 AL445687.1-201ENST00000439946 251 ntBASIC3.35□□□□□ -1.87
TRIM55Q9BYV6 AC117440.1-201ENST00000474107 571 ntBASIC3.35□□□□□ -1.87
TRIM55Q9BYV6 RN7SL283P-201ENST00000489055 303 ntBASIC3.35□□□□□ -1.87
TRIM55Q9BYV6 RNU1-143P-201ENST00000516296 146 ntBASIC3.35□□□□□ -1.87
TRIM55Q9BYV6 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3.35□□□□□ -1.87
TRIM55Q9BYV6 U1.23-201ENST00000610293 146 ntBASIC3.35□□□□□ -1.87
TRIM55Q9BYV6 RNU1-68P-201ENST00000615382 146 ntBASIC3.35□□□□□ -1.87
TRIM55Q9BYV6 U1.39-201ENST00000621562 146 ntBASIC3.35□□□□□ -1.87
TRIM55Q9BYV6 AC008873.1-201ENST00000625051 138 ntBASIC3.35□□□□□ -1.87
TRIM55Q9BYV6 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.35□□□□□ -1.87
TRIM55Q9BYV6 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
TRIM55Q9BYV6 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.34□□□□□ -1.87
TRIM55Q9BYV6 Y_RNA.84-201ENST00000363011 104 ntBASIC3.34□□□□□ -1.87
TRIM55Q9BYV6 SNORD113-8-201ENST00000363497 74 ntBASIC3.34□□□□□ -1.87
TRIM55Q9BYV6 Y_RNA.230-201ENST00000364348 109 ntBASIC3.34□□□□□ -1.87
TRIM55Q9BYV6 Y_RNA.570-201ENST00000384750 101 ntBASIC3.34□□□□□ -1.87
TRIM55Q9BYV6 MIR128-1-201ENST00000384921 82 ntBASIC3.34□□□□□ -1.87
TRIM55Q9BYV6 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
TRIM55Q9BYV6 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
TRIM55Q9BYV6 RNU5A-5P-201ENST00000411054 116 ntBASIC3.34□□□□□ -1.87
TRIM55Q9BYV6 RNU2-32P-201ENST00000411193 191 ntBASIC3.34□□□□□ -1.87
TRIM55Q9BYV6 RPL32P35-201ENST00000415214 394 ntBASIC3.34□□□□□ -1.87
TRIM55Q9BYV6 AC005326.1-201ENST00000429197 123 ntBASIC3.34□□□□□ -1.87
TRIM55Q9BYV6 SNORA59A-201ENST00000459326 152 ntBASIC3.34□□□□□ -1.87
TRIM55Q9BYV6 RNU7-14P-201ENST00000459331 62 ntBASIC3.34□□□□□ -1.87
TRIM55Q9BYV6 TRBVB-201ENST00000477100 408 ntBASIC3.34□□□□□ -1.87
TRIM55Q9BYV6 RPS29P2-201ENST00000479278 136 ntBASIC3.34□□□□□ -1.87
TRIM55Q9BYV6 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.34□□□□□ -1.87
TRIM55Q9BYV6 SCARNA20.6-201ENST00000517251 106 ntBASIC3.34□□□□□ -1.87
TRIM55Q9BYV6 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.34□□□□□ -1.87
TRIM55Q9BYV6 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
TRIM55Q9BYV6 AC055872.1-201ENST00000570978 278 ntBASIC3.34□□□□□ -1.87
TRIM55Q9BYV6 MIR4506-201ENST00000584693 77 ntBASIC3.34□□□□□ -1.87
TRIM55Q9BYV6 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.34□□□□□ -1.87
TRIM55Q9BYV6 AC005176.2-201ENST00000596933 147 ntBASIC3.34□□□□□ -1.87
TRIM55Q9BYV6 AC073657.2-201ENST00000605661 303 ntBASIC3.34□□□□□ -1.87
TRIM55Q9BYV6 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
TRIM55Q9BYV6 U6.104-201ENST00000637979 90 ntBASIC3.34□□□□□ -1.87
TRIM55Q9BYV6 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
TRIM55Q9BYV6 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
TRIM55Q9BYV6 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
TRIM55Q9BYV6 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
TRIM55Q9BYV6 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.33□□□□□ -1.88
TRIM55Q9BYV6 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
TRIM55Q9BYV6 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.33□□□□□ -1.88
TRIM55Q9BYV6 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
TRIM55Q9BYV6 RNA5SP125-201ENST00000364843 120 ntBASIC3.33□□□□□ -1.88
TRIM55Q9BYV6 Y_RNA.288-201ENST00000364854 92 ntBASIC3.33□□□□□ -1.88
TRIM55Q9BYV6 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
TRIM55Q9BYV6 RNU6-546P-201ENST00000383991 107 ntBASIC3.33□□□□□ -1.88
TRIM55Q9BYV6 MIR634-201ENST00000385208 97 ntBASIC3.33□□□□□ -1.88
TRIM55Q9BYV6 Y_RNA.581-201ENST00000391017 97 ntBASIC3.33□□□□□ -1.88
TRIM55Q9BYV6 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.33□□□□□ -1.88
TRIM55Q9BYV6 Y_RNA.602-201ENST00000410535 92 ntBASIC3.33□□□□□ -1.88
TRIM55Q9BYV6 RNU2-25P-201ENST00000411041 191 ntBASIC3.33□□□□□ -1.88
TRIM55Q9BYV6 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.33□□□□□ -1.88
TRIM55Q9BYV6 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.33□□□□□ -1.88
TRIM55Q9BYV6 ATP5EP1-201ENST00000510257 156 ntBASIC3.33□□□□□ -1.88
TRIM55Q9BYV6 AC109329.2-201ENST00000519658 482 ntBASIC3.33□□□□□ -1.88
TRIM55Q9BYV6 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.33□□□□□ -1.88
TRIM55Q9BYV6 AC022616.8-201ENST00000533569 253 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 130.9 ms