Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC1.09□□□□□ -2.23
HMCN1Q96RW7 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC1.09□□□□□ -2.23
HMCN1Q96RW7 CYP2C61P-201ENST00000604072 290 ntBASIC1.09□□□□□ -2.23
HMCN1Q96RW7 BNIP3P7-201ENST00000605641 516 ntBASIC1.09□□□□□ -2.23
HMCN1Q96RW7 AC092608.2-201ENST00000624427 218 ntBASIC1.09□□□□□ -2.23
HMCN1Q96RW7 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC1.09□□□□□ -2.23
HMCN1Q96RW7 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC1.09□□□□□ -2.23
HMCN1Q96RW7 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
HMCN1Q96RW7 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
HMCN1Q96RW7 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
HMCN1Q96RW7 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC1.09□□□□□ -2.24
HMCN1Q96RW7 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
HMCN1Q96RW7 Y_RNA.69-201ENST00000362885 109 ntBASIC1.09□□□□□ -2.24
HMCN1Q96RW7 SNORD114-13-201ENST00000364377 74 ntBASIC1.09□□□□□ -2.24
HMCN1Q96RW7 SNORA51.5-201ENST00000384126 131 ntBASIC1.09□□□□□ -2.24
HMCN1Q96RW7 Y_RNA.482-201ENST00000384377 111 ntBASIC1.09□□□□□ -2.24
HMCN1Q96RW7 Y_RNA.534-201ENST00000384599 112 ntBASIC1.09□□□□□ -2.24
HMCN1Q96RW7 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.09□□□□□ -2.24
HMCN1Q96RW7 SNORA75.1-201ENST00000391130 148 ntBASIC1.09□□□□□ -2.24
HMCN1Q96RW7 AL359643.1-201ENST00000404109 423 ntBASIC1.09□□□□□ -2.24
HMCN1Q96RW7 UBE2D3P3-201ENST00000426992 425 ntBASIC1.09□□□□□ -2.24
HMCN1Q96RW7 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.09□□□□□ -2.24
HMCN1Q96RW7 AL158147.1-201ENST00000443970 75 ntBASIC1.09□□□□□ -2.24
HMCN1Q96RW7 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC1.09□□□□□ -2.24
HMCN1Q96RW7 RPL7P24-201ENST00000493052 752 ntBASIC1.09□□□□□ -2.24
HMCN1Q96RW7 RNU5F-8P-201ENST00000515941 111 ntBASIC1.09□□□□□ -2.24
HMCN1Q96RW7 RNU6-27P-201ENST00000516146 107 ntBASIC1.09□□□□□ -2.24
HMCN1Q96RW7 RNU6-412P-201ENST00000516434 106 ntBASIC1.09□□□□□ -2.24
HMCN1Q96RW7 RNA5SP164-201ENST00000516533 110 ntBASIC1.09□□□□□ -2.24
HMCN1Q96RW7 AC009902.1-201ENST00000519351 183 ntBASIC1.09□□□□□ -2.24
HMCN1Q96RW7 EIF1P4-201ENST00000572664 335 ntBASIC1.09□□□□□ -2.24
HMCN1Q96RW7 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC1.09□□□□□ -2.24
HMCN1Q96RW7 AC078899.5-201ENST00000612475 178 ntBASIC1.09□□□□□ -2.24
HMCN1Q96RW7 AC083806.3-201ENST00000614016 455 ntBASIC1.09□□□□□ -2.24
HMCN1Q96RW7 CR381572.1-201ENST00000625098 102 ntBASIC1.09□□□□□ -2.24
HMCN1Q96RW7 MIR3658-201ENST00000636291 56 ntBASIC1.09□□□□□ -2.24
HMCN1Q96RW7 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC1.09□□□□□ -2.24
HMCN1Q96RW7 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
HMCN1Q96RW7 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC1.09□□□□□ -2.24
HMCN1Q96RW7 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
HMCN1Q96RW7 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.24
HMCN1Q96RW7 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC1.09□□□□□ -2.24
HMCN1Q96RW7 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
HMCN1Q96RW7 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC1.09□□□□□ -2.24
HMCN1Q96RW7 RNU6-199P-201ENST00000362954 107 ntBASIC1.09□□□□□ -2.24
HMCN1Q96RW7 RNU6-454P-201ENST00000364292 107 ntBASIC1.09□□□□□ -2.24
HMCN1Q96RW7 Y_RNA.458-201ENST00000384240 102 ntBASIC1.09□□□□□ -2.24
HMCN1Q96RW7 Y_RNA.474-201ENST00000384341 102 ntBASIC1.09□□□□□ -2.24
HMCN1Q96RW7 RNU6-1340P-201ENST00000384438 107 ntBASIC1.09□□□□□ -2.24
HMCN1Q96RW7 SNORA67.4-201ENST00000384688 142 ntBASIC1.09□□□□□ -2.24
HMCN1Q96RW7 MIR125B1-201ENST00000385236 88 ntBASIC1.09□□□□□ -2.24
HMCN1Q96RW7 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
HMCN1Q96RW7 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC1.09□□□□□ -2.24
HMCN1Q96RW7 AP000936.3-201ENST00000438127 255 ntBASIC1.09□□□□□ -2.24
HMCN1Q96RW7 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC1.09□□□□□ -2.24
HMCN1Q96RW7 AL513328.1-201ENST00000446460 224 ntBASIC1.09□□□□□ -2.24
HMCN1Q96RW7 AC011753.1-201ENST00000451001 220 ntBASIC1.09□□□□□ -2.24
HMCN1Q96RW7 snoU109.2-201ENST00000459316 135 ntBASIC1.09□□□□□ -2.24
HMCN1Q96RW7 AP001025.1-201ENST00000486139 332 ntBASIC1.09□□□□□ -2.24
HMCN1Q96RW7 RPL30P10-201ENST00000488148 337 ntBASIC1.09□□□□□ -2.24
HMCN1Q96RW7 AC023050.1-201ENST00000498198 304 ntBASIC1.09□□□□□ -2.24
HMCN1Q96RW7 SNORA19.3-201ENST00000516165 130 ntBASIC1.09□□□□□ -2.24
HMCN1Q96RW7 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC1.09□□□□□ -2.24
HMCN1Q96RW7 MTND5P34-201ENST00000568888 325 ntBASIC1.09□□□□□ -2.24
HMCN1Q96RW7 AL451044.1-201ENST00000604867 238 ntBASIC1.09□□□□□ -2.24
HMCN1Q96RW7 RMST_2.1-201ENST00000617263 136 ntBASIC1.09□□□□□ -2.24
HMCN1Q96RW7 AC091905.2-201ENST00000623143 306 ntBASIC1.09□□□□□ -2.24
HMCN1Q96RW7 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC1.09□□□□□ -2.24
HMCN1Q96RW7 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
HMCN1Q96RW7 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC1.08□□□□□ -2.24
HMCN1Q96RW7 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
HMCN1Q96RW7 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC1.08□□□□□ -2.24
HMCN1Q96RW7 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC1.08□□□□□ -2.24
HMCN1Q96RW7 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC1.08□□□□□ -2.24
HMCN1Q96RW7 SNORA63.2-201ENST00000362603 126 ntBASIC1.08□□□□□ -2.24
HMCN1Q96RW7 Y_RNA.350-201ENST00000365409 98 ntBASIC1.08□□□□□ -2.24
HMCN1Q96RW7 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
HMCN1Q96RW7 SNORA40.6-201ENST00000391153 128 ntBASIC1.08□□□□□ -2.24
HMCN1Q96RW7 RNA5SP31-201ENST00000411144 127 ntBASIC1.08□□□□□ -2.24
HMCN1Q96RW7 FTH1P12-201ENST00000432137 551 ntBASIC1.08□□□□□ -2.24
HMCN1Q96RW7 AL451074.3-201ENST00000437709 472 ntBASIC1.08□□□□□ -2.24
HMCN1Q96RW7 AC016696.1-201ENST00000446949 318 ntBASIC1.08□□□□□ -2.24
HMCN1Q96RW7 AC107398.1-201ENST00000486904 505 ntBASIC1.08□□□□□ -2.24
HMCN1Q96RW7 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.08□□□□□ -2.24
HMCN1Q96RW7 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC1.08□□□□□ -2.24
HMCN1Q96RW7 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC1.08□□□□□ -2.24
HMCN1Q96RW7 AL118558.2-201ENST00000556294 238 ntBASIC1.08□□□□□ -2.24
HMCN1Q96RW7 MIR4666A-201ENST00000580160 79 ntBASIC1.08□□□□□ -2.24
HMCN1Q96RW7 MIR548Z-201ENST00000584743 97 ntBASIC1.08□□□□□ -2.24
HMCN1Q96RW7 MIR7851-201ENST00000610611 160 ntBASIC1.08□□□□□ -2.24
HMCN1Q96RW7 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
HMCN1Q96RW7 AP000553.6-201ENST00000641242 118 ntBASIC1.08□□□□□ -2.24
HMCN1Q96RW7 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
HMCN1Q96RW7 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC1.08□□□□□ -2.24
HMCN1Q96RW7 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC1.08□□□□□ -2.24
HMCN1Q96RW7 MIR369-201ENST00000362155 70 ntBASIC1.08□□□□□ -2.24
HMCN1Q96RW7 SNORD45.1-201ENST00000363181 77 ntBASIC1.08□□□□□ -2.24
HMCN1Q96RW7 RNA5SP399-201ENST00000364003 117 ntBASIC1.08□□□□□ -2.24
HMCN1Q96RW7 RNU1-44P-201ENST00000384453 163 ntBASIC1.08□□□□□ -2.24
HMCN1Q96RW7 RNY1P4-201ENST00000384595 115 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms