Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC4.07□□□□□ -1.76
CALR3Q96L12 RNU6-948P-201ENST00000516374 107 ntBASIC4.07□□□□□ -1.76
CALR3Q96L12 RNU6-965P-201ENST00000516721 96 ntBASIC4.07□□□□□ -1.76
CALR3Q96L12 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC4.07□□□□□ -1.76
CALR3Q96L12 MIR3144-201ENST00000579460 79 ntBASIC4.07□□□□□ -1.76
CALR3Q96L12 RN7SL600P-201ENST00000581811 299 ntBASIC4.07□□□□□ -1.76
CALR3Q96L12 RNU2-4P-201ENST00000606190 192 ntBASIC4.07□□□□□ -1.76
CALR3Q96L12 U2.15-201ENST00000611544 191 ntBASIC4.07□□□□□ -1.76
CALR3Q96L12 U2.16-201ENST00000613119 191 ntBASIC4.07□□□□□ -1.76
CALR3Q96L12 U2.12-201ENST00000613778 191 ntBASIC4.07□□□□□ -1.76
CALR3Q96L12 U2.9-201ENST00000615427 191 ntBASIC4.07□□□□□ -1.76
CALR3Q96L12 U2.11-201ENST00000616345 191 ntBASIC4.07□□□□□ -1.76
CALR3Q96L12 U2.2-201ENST00000616535 191 ntBASIC4.07□□□□□ -1.76
CALR3Q96L12 U2.3-201ENST00000617785 191 ntBASIC4.07□□□□□ -1.76
CALR3Q96L12 U2.19-201ENST00000618602 191 ntBASIC4.07□□□□□ -1.76
CALR3Q96L12 RNU2-1-201ENST00000618664 191 ntBASIC4.07□□□□□ -1.76
CALR3Q96L12 U2.6-201ENST00000619225 191 ntBASIC4.07□□□□□ -1.76
CALR3Q96L12 U2.5-201ENST00000619465 191 ntBASIC4.07□□□□□ -1.76
CALR3Q96L12 U2.10-201ENST00000620268 191 ntBASIC4.07□□□□□ -1.76
CALR3Q96L12 MIR6730-201ENST00000622213 67 ntBASIC4.07□□□□□ -1.76
CALR3Q96L12 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC4.07□□□□□ -1.76
CALR3Q96L12 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CALR3Q96L12 AL513302.2-201ENST00000562313 1842 ntBASIC4.07□□□□□ -1.76
CALR3Q96L12 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CALR3Q96L12 Y_RNA.293-201ENST00000364908 93 ntBASIC4.06□□□□□ -1.76
CALR3Q96L12 RNU6-546P-201ENST00000383991 107 ntBASIC4.06□□□□□ -1.76
CALR3Q96L12 AL121890.1-201ENST00000435457 205 ntBASIC4.06□□□□□ -1.76
CALR3Q96L12 AC009969.1-201ENST00000438726 172 ntBASIC4.06□□□□□ -1.76
CALR3Q96L12 AL161788.1-201ENST00000441805 169 ntBASIC4.06□□□□□ -1.76
CALR3Q96L12 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC4.06□□□□□ -1.76
CALR3Q96L12 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.06□□□□□ -1.76
CALR3Q96L12 RPL23AP7-203ENST00000449021 469 ntBASIC4.06□□□□□ -1.76
CALR3Q96L12 CENPBD1P1-201ENST00000464061 469 ntBASIC4.06□□□□□ -1.76
CALR3Q96L12 PHBP14-201ENST00000512887 367 ntBASIC4.06□□□□□ -1.76
CALR3Q96L12 AC022616.8-201ENST00000533569 253 ntBASIC4.06□□□□□ -1.76
CALR3Q96L12 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC4.06□□□□□ -1.76
CALR3Q96L12 MIR4277-201ENST00000578298 84 ntBASIC4.06□□□□□ -1.76
CALR3Q96L12 AC108706.1-201ENST00000611053 297 ntBASIC4.06□□□□□ -1.76
CALR3Q96L12 AC104465.1-201ENST00000611365 139 ntBASIC4.06□□□□□ -1.76
CALR3Q96L12 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CALR3Q96L12 AL445567.2-201ENST00000618935 498 ntBASIC4.06□□□□□ -1.76
CALR3Q96L12 SNORA50A-202ENST00000629536 136 ntBASIC4.06□□□□□ -1.76
CALR3Q96L12 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CALR3Q96L12 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CALR3Q96L12 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.06□□□□□ -1.76
CALR3Q96L12 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CALR3Q96L12 AC110774.1-201ENST00000623567 2018 ntBASIC4.05□□□□□ -1.76
CALR3Q96L12 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
CALR3Q96L12 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC4.05□□□□□ -1.76
CALR3Q96L12 RNU6-271P-201ENST00000363858 105 ntBASIC4.05□□□□□ -1.76
CALR3Q96L12 RNU6-312P-201ENST00000364629 107 ntBASIC4.05□□□□□ -1.76
CALR3Q96L12 RNY1P5-201ENST00000383890 115 ntBASIC4.05□□□□□ -1.76
CALR3Q96L12 RNU6-804P-201ENST00000384286 107 ntBASIC4.05□□□□□ -1.76
CALR3Q96L12 SNORA8.3-201ENST00000384679 139 ntBASIC4.05□□□□□ -1.76
CALR3Q96L12 MIR95-201ENST00000385072 81 ntBASIC4.05□□□□□ -1.76
CALR3Q96L12 RNU6-1135P-201ENST00000411083 103 ntBASIC4.05□□□□□ -1.76
CALR3Q96L12 RNU2-32P-201ENST00000411193 191 ntBASIC4.05□□□□□ -1.76
CALR3Q96L12 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC4.05□□□□□ -1.76
CALR3Q96L12 AC016717.1-201ENST00000448918 286 ntBASIC4.05□□□□□ -1.76
CALR3Q96L12 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.05□□□□□ -1.76
CALR3Q96L12 RNU7-141P-201ENST00000459304 62 ntBASIC4.05□□□□□ -1.76
CALR3Q96L12 AC023141.11-201ENST00000508864 202 ntBASIC4.05□□□□□ -1.76
CALR3Q96L12 AC010598.1-201ENST00000510378 103 ntBASIC4.05□□□□□ -1.76
CALR3Q96L12 AC021269.2-201ENST00000532318 330 ntBASIC4.05□□□□□ -1.76
CALR3Q96L12 MIR3138-201ENST00000585238 82 ntBASIC4.05□□□□□ -1.76
CALR3Q96L12 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.05□□□□□ -1.76
CALR3Q96L12 SNORA51-201ENST00000606420 132 ntBASIC4.05□□□□□ -1.76
CALR3Q96L12 MIR1248-201ENST00000629190 106 ntBASIC4.05□□□□□ -1.76
CALR3Q96L12 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC4.05□□□□□ -1.76
CALR3Q96L12 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CALR3Q96L12 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.05□□□□□ -1.76
CALR3Q96L12 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CALR3Q96L12 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CALR3Q96L12 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CALR3Q96L12 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC4.04□□□□□ -1.76
CALR3Q96L12 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.04□□□□□ -1.76
CALR3Q96L12 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CALR3Q96L12 Y_RNA.124-201ENST00000363339 93 ntBASIC4.04□□□□□ -1.76
CALR3Q96L12 SNORD21-201ENST00000383953 95 ntBASIC4.04□□□□□ -1.76
CALR3Q96L12 AC002075.2-201ENST00000425207 252 ntBASIC4.04□□□□□ -1.76
CALR3Q96L12 AC006989.1-201ENST00000427212 131 ntBASIC4.04□□□□□ -1.76
CALR3Q96L12 HMGN2P18-201ENST00000450680 270 ntBASIC4.04□□□□□ -1.76
CALR3Q96L12 HSPE1P13-201ENST00000451143 297 ntBASIC4.04□□□□□ -1.76
CALR3Q96L12 CYCSP35-201ENST00000451978 304 ntBASIC4.04□□□□□ -1.76
CALR3Q96L12 SNORD65B-201ENST00000459126 73 ntBASIC4.04□□□□□ -1.76
CALR3Q96L12 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC4.04□□□□□ -1.76
CALR3Q96L12 MIR4284-201ENST00000578924 81 ntBASIC4.04□□□□□ -1.76
CALR3Q96L12 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CALR3Q96L12 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CALR3Q96L12 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CALR3Q96L12 Y_RNA.8-201ENST00000362353 102 ntBASIC4.03□□□□□ -1.76
CALR3Q96L12 SNORA27.1-201ENST00000362604 124 ntBASIC4.03□□□□□ -1.76
CALR3Q96L12 Y_RNA.182-201ENST00000363880 111 ntBASIC4.03□□□□□ -1.76
CALR3Q96L12 RNA5SP240-201ENST00000365355 128 ntBASIC4.03□□□□□ -1.76
CALR3Q96L12 MIR626-201ENST00000385032 94 ntBASIC4.03□□□□□ -1.76
CALR3Q96L12 RNU6-381P-201ENST00000391259 108 ntBASIC4.03□□□□□ -1.76
CALR3Q96L12 RN7SKP202-201ENST00000410439 330 ntBASIC4.03□□□□□ -1.76
CALR3Q96L12 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.03□□□□□ -1.76
CALR3Q96L12 RPS27AP9-201ENST00000477681 438 ntBASIC4.03□□□□□ -1.76
CALR3Q96L12 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms