Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.32□□□□□ -1.88
NUP43Q8NFH3 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
NUP43Q8NFH3 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
NUP43Q8NFH3 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NUP43Q8NFH3 AC002546.1-201ENST00000588041 2504 ntBASIC3.31□□□□□ -1.88
NUP43Q8NFH3 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
NUP43Q8NFH3 MIR423-201ENST00000362201 94 ntBASIC3.31□□□□□ -1.88
NUP43Q8NFH3 SNORD9-201ENST00000362566 104 ntBASIC3.31□□□□□ -1.88
NUP43Q8NFH3 RNA5SP295-201ENST00000362655 121 ntBASIC3.31□□□□□ -1.88
NUP43Q8NFH3 Y_RNA.357-201ENST00000365487 109 ntBASIC3.31□□□□□ -1.88
NUP43Q8NFH3 SNORA18.2-201ENST00000383865 132 ntBASIC3.31□□□□□ -1.88
NUP43Q8NFH3 RNU6-1027P-201ENST00000383998 107 ntBASIC3.31□□□□□ -1.88
NUP43Q8NFH3 SNORA67.2-201ENST00000384300 149 ntBASIC3.31□□□□□ -1.88
NUP43Q8NFH3 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
NUP43Q8NFH3 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NUP43Q8NFH3 RHEBP3-201ENST00000411920 351 ntBASIC3.31□□□□□ -1.88
NUP43Q8NFH3 ATP5A1P2-201ENST00000412323 255 ntBASIC3.31□□□□□ -1.88
NUP43Q8NFH3 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.31□□□□□ -1.88
NUP43Q8NFH3 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.31□□□□□ -1.88
NUP43Q8NFH3 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.31□□□□□ -1.88
NUP43Q8NFH3 RPS3P1-201ENST00000456781 192 ntBASIC3.31□□□□□ -1.88
NUP43Q8NFH3 AL441985.1-201ENST00000457727 251 ntBASIC3.31□□□□□ -1.88
NUP43Q8NFH3 AC091179.1-201ENST00000461606 579 ntBASIC3.31□□□□□ -1.88
NUP43Q8NFH3 AP002884.2-201ENST00000471647 395 ntBASIC3.31□□□□□ -1.88
NUP43Q8NFH3 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.31□□□□□ -1.88
NUP43Q8NFH3 RNU6-479P-201ENST00000516348 105 ntBASIC3.31□□□□□ -1.88
NUP43Q8NFH3 RNU1-117P-201ENST00000517041 158 ntBASIC3.31□□□□□ -1.88
NUP43Q8NFH3 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.31□□□□□ -1.88
NUP43Q8NFH3 AC026333.2-201ENST00000542164 106 ntBASIC3.31□□□□□ -1.88
NUP43Q8NFH3 AC027176.1-201ENST00000560204 514 ntBASIC3.31□□□□□ -1.88
NUP43Q8NFH3 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.31□□□□□ -1.88
NUP43Q8NFH3 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.31□□□□□ -1.88
NUP43Q8NFH3 MIR5006-201ENST00000583027 110 ntBASIC3.31□□□□□ -1.88
NUP43Q8NFH3 AL391813.1-201ENST00000603098 260 ntBASIC3.31□□□□□ -1.88
NUP43Q8NFH3 AL391261.4-201ENST00000616012 481 ntBASIC3.31□□□□□ -1.88
NUP43Q8NFH3 AL138880.2-201ENST00000616214 239 ntBASIC3.31□□□□□ -1.88
NUP43Q8NFH3 AC013791.1-201ENST00000616619 62 ntBASIC3.31□□□□□ -1.88
NUP43Q8NFH3 AC022149.2-201ENST00000621061 203 ntBASIC3.31□□□□□ -1.88
NUP43Q8NFH3 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
NUP43Q8NFH3 PWAR6-201ENST00000552334 4618 ntBASIC3.31□□□□□ -1.88
NUP43Q8NFH3 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
NUP43Q8NFH3 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
NUP43Q8NFH3 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
NUP43Q8NFH3 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
NUP43Q8NFH3 AC010329.5-201ENST00000623497 2174 ntBASIC3.3□□□□□ -1.88
NUP43Q8NFH3 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.3□□□□□ -1.88
NUP43Q8NFH3 Y_RNA.243-201ENST00000364481 109 ntBASIC3.3□□□□□ -1.88
NUP43Q8NFH3 MIR147B-201ENST00000390185 80 ntBASIC3.3□□□□□ -1.88
NUP43Q8NFH3 Y_RNA.586-201ENST00000391146 98 ntBASIC3.3□□□□□ -1.88
NUP43Q8NFH3 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
NUP43Q8NFH3 RN7SL594P-201ENST00000470590 287 ntBASIC3.3□□□□□ -1.88
NUP43Q8NFH3 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.3□□□□□ -1.88
NUP43Q8NFH3 RN7SKP18-201ENST00000516005 275 ntBASIC3.3□□□□□ -1.88
NUP43Q8NFH3 SNORA70.18-201ENST00000516696 98 ntBASIC3.3□□□□□ -1.88
NUP43Q8NFH3 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.3□□□□□ -1.88
NUP43Q8NFH3 AC007179.3-201ENST00000604976 235 ntBASIC3.3□□□□□ -1.88
NUP43Q8NFH3 AL121772.2-201ENST00000614331 297 ntBASIC3.3□□□□□ -1.88
NUP43Q8NFH3 Y_RNA.778-201ENST00000620203 90 ntBASIC3.3□□□□□ -1.88
NUP43Q8NFH3 U4.6-201ENST00000621618 127 ntBASIC3.3□□□□□ -1.88
NUP43Q8NFH3 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.3□□□□□ -1.88
NUP43Q8NFH3 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
NUP43Q8NFH3 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
NUP43Q8NFH3 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
NUP43Q8NFH3 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
NUP43Q8NFH3 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.3□□□□□ -1.88
NUP43Q8NFH3 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
NUP43Q8NFH3 RNA5SP124-201ENST00000362739 110 ntBASIC3.29□□□□□ -1.88
NUP43Q8NFH3 RNU6-1210P-201ENST00000363775 107 ntBASIC3.29□□□□□ -1.88
NUP43Q8NFH3 snoU2_19.4-201ENST00000364329 80 ntBASIC3.29□□□□□ -1.88
NUP43Q8NFH3 RNU4-10P-201ENST00000364383 140 ntBASIC3.29□□□□□ -1.88
NUP43Q8NFH3 SNORD50B-201ENST00000364995 70 ntBASIC3.29□□□□□ -1.88
NUP43Q8NFH3 Y_RNA.361-201ENST00000365515 120 ntBASIC3.29□□□□□ -1.88
NUP43Q8NFH3 SNORA72.4-201ENST00000384174 132 ntBASIC3.29□□□□□ -1.88
NUP43Q8NFH3 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
NUP43Q8NFH3 RNA5SP38-201ENST00000410750 119 ntBASIC3.29□□□□□ -1.88
NUP43Q8NFH3 DBIP2-201ENST00000419076 262 ntBASIC3.29□□□□□ -1.88
NUP43Q8NFH3 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.29□□□□□ -1.88
NUP43Q8NFH3 TOMM22P2-201ENST00000430735 237 ntBASIC3.29□□□□□ -1.88
NUP43Q8NFH3 AL357552.1-201ENST00000445254 415 ntBASIC3.29□□□□□ -1.88
NUP43Q8NFH3 RPS20P10-201ENST00000451209 253 ntBASIC3.29□□□□□ -1.88
NUP43Q8NFH3 SNORD105B-201ENST00000458770 79 ntBASIC3.29□□□□□ -1.88
NUP43Q8NFH3 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.29□□□□□ -1.88
NUP43Q8NFH3 RN7SKP164-201ENST00000516138 266 ntBASIC3.29□□□□□ -1.88
NUP43Q8NFH3 RNU6-426P-201ENST00000516464 97 ntBASIC3.29□□□□□ -1.88
NUP43Q8NFH3 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.29□□□□□ -1.88
NUP43Q8NFH3 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.29□□□□□ -1.88
NUP43Q8NFH3 AC021269.2-201ENST00000532318 330 ntBASIC3.29□□□□□ -1.88
NUP43Q8NFH3 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.29□□□□□ -1.88
NUP43Q8NFH3 RNVU1-4-201ENST00000612985 164 ntBASIC3.29□□□□□ -1.88
NUP43Q8NFH3 MIR8058-201ENST00000615737 89 ntBASIC3.29□□□□□ -1.88
NUP43Q8NFH3 XIST_intron.1-201ENST00000619444 68 ntBASIC3.29□□□□□ -1.88
NUP43Q8NFH3 AC091895.1-201ENST00000624494 256 ntBASIC3.29□□□□□ -1.88
NUP43Q8NFH3 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.29□□□□□ -1.88
NUP43Q8NFH3 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.29□□□□□ -1.88
NUP43Q8NFH3 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
NUP43Q8NFH3 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
NUP43Q8NFH3 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
NUP43Q8NFH3 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
NUP43Q8NFH3 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.28□□□□□ -1.88
NUP43Q8NFH3 RNU6-655P-201ENST00000362858 107 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms