Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.12□□□□□ -1.91
UBE3BQ7Z3V4 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.12□□□□□ -1.91
UBE3BQ7Z3V4 RPS15AP11-201ENST00000594193 385 ntBASIC3.12□□□□□ -1.91
UBE3BQ7Z3V4 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC3.12□□□□□ -1.91
UBE3BQ7Z3V4 AC078899.3-201ENST00000599065 212 ntBASIC3.12□□□□□ -1.91
UBE3BQ7Z3V4 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.12□□□□□ -1.91
UBE3BQ7Z3V4 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.12□□□□□ -1.91
UBE3BQ7Z3V4 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
UBE3BQ7Z3V4 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
UBE3BQ7Z3V4 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.11□□□□□ -1.91
UBE3BQ7Z3V4 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
UBE3BQ7Z3V4 RNU6-222P-201ENST00000362438 107 ntBASIC3.11□□□□□ -1.91
UBE3BQ7Z3V4 SNORA36A-201ENST00000384221 132 ntBASIC3.11□□□□□ -1.91
UBE3BQ7Z3V4 RNU6-472P-201ENST00000384299 107 ntBASIC3.11□□□□□ -1.91
UBE3BQ7Z3V4 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.11□□□□□ -1.91
UBE3BQ7Z3V4 USP9YP16-201ENST00000430287 407 ntBASIC3.11□□□□□ -1.91
UBE3BQ7Z3V4 TRAPPC2P8-201ENST00000440676 396 ntBASIC3.11□□□□□ -1.91
UBE3BQ7Z3V4 USP9YP23-201ENST00000455085 407 ntBASIC3.11□□□□□ -1.91
UBE3BQ7Z3V4 AC025465.3-201ENST00000510570 311 ntBASIC3.11□□□□□ -1.91
UBE3BQ7Z3V4 RNU6-1114P-201ENST00000516022 107 ntBASIC3.11□□□□□ -1.91
UBE3BQ7Z3V4 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.11□□□□□ -1.91
UBE3BQ7Z3V4 HSPE1P20-201ENST00000538133 289 ntBASIC3.11□□□□□ -1.91
UBE3BQ7Z3V4 AC027288.2-201ENST00000553028 243 ntBASIC3.11□□□□□ -1.91
UBE3BQ7Z3V4 AC110588.1-201ENST00000559699 137 ntBASIC3.11□□□□□ -1.91
UBE3BQ7Z3V4 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.11□□□□□ -1.91
UBE3BQ7Z3V4 AL359198.2-201ENST00000611836 194 ntBASIC3.11□□□□□ -1.91
UBE3BQ7Z3V4 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.11□□□□□ -1.91
UBE3BQ7Z3V4 NAA50-211ENST00000630058 177 ntTSL 5 BASIC3.11□□□□□ -1.91
UBE3BQ7Z3V4 U6.92-201ENST00000636464 89 ntBASIC3.11□□□□□ -1.91
UBE3BQ7Z3V4 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
UBE3BQ7Z3V4 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
UBE3BQ7Z3V4 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.11□□□□□ -1.91
UBE3BQ7Z3V4 RNU6-1301P-201ENST00000362724 104 ntBASIC3.1□□□□□ -1.91
UBE3BQ7Z3V4 RNU6-1010P-201ENST00000362757 107 ntBASIC3.1□□□□□ -1.91
UBE3BQ7Z3V4 Y_RNA.222-201ENST00000364264 102 ntBASIC3.1□□□□□ -1.91
UBE3BQ7Z3V4 Y_RNA.396-201ENST00000383949 103 ntBASIC3.1□□□□□ -1.91
UBE3BQ7Z3V4 RNU6-713P-201ENST00000384761 107 ntBASIC3.1□□□□□ -1.91
UBE3BQ7Z3V4 AL359511.1-201ENST00000402970 211 ntBASIC3.1□□□□□ -1.91
UBE3BQ7Z3V4 AL441985.1-201ENST00000457727 251 ntBASIC3.1□□□□□ -1.91
UBE3BQ7Z3V4 snoU13.14-201ENST00000459372 104 ntBASIC3.1□□□□□ -1.91
UBE3BQ7Z3V4 SNRPGP7-201ENST00000469016 106 ntBASIC3.1□□□□□ -1.91
UBE3BQ7Z3V4 AP000870.1-201ENST00000472927 406 ntBASIC3.1□□□□□ -1.91
UBE3BQ7Z3V4 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.1□□□□□ -1.91
UBE3BQ7Z3V4 RNU6-408P-201ENST00000515910 100 ntBASIC3.1□□□□□ -1.91
UBE3BQ7Z3V4 RNU6-1012P-201ENST00000516606 109 ntBASIC3.1□□□□□ -1.91
UBE3BQ7Z3V4 SNORA40.15-201ENST00000516884 107 ntBASIC3.1□□□□□ -1.91
UBE3BQ7Z3V4 AC125232.2-201ENST00000592457 143 ntBASIC3.1□□□□□ -1.91
UBE3BQ7Z3V4 AL078605.1-201ENST00000603529 500 ntBASIC3.1□□□□□ -1.91
UBE3BQ7Z3V4 AC130454.1-201ENST00000622948 401 ntBASIC3.1□□□□□ -1.91
UBE3BQ7Z3V4 AC110079.1-202ENST00000635213 138 ntBASIC3.1□□□□□ -1.91
UBE3BQ7Z3V4 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.1□□□□□ -1.91
UBE3BQ7Z3V4 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
UBE3BQ7Z3V4 AC099654.7-201ENST00000635788 2127 ntBASIC3.1□□□□□ -1.91
UBE3BQ7Z3V4 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
UBE3BQ7Z3V4 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.09□□□□□ -1.91
UBE3BQ7Z3V4 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.09□□□□□ -1.91
UBE3BQ7Z3V4 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.09□□□□□ -1.91
UBE3BQ7Z3V4 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.09□□□□□ -1.91
UBE3BQ7Z3V4 Y_RNA.19-201ENST00000362462 99 ntBASIC3.09□□□□□ -1.91
UBE3BQ7Z3V4 Y_RNA.26-201ENST00000362539 101 ntBASIC3.09□□□□□ -1.91
UBE3BQ7Z3V4 Y_RNA.518-201ENST00000384552 113 ntBASIC3.09□□□□□ -1.91
UBE3BQ7Z3V4 CBX3P6-201ENST00000430257 527 ntBASIC3.09□□□□□ -1.91
UBE3BQ7Z3V4 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.09□□□□□ -1.91
UBE3BQ7Z3V4 AC096638.1-201ENST00000444678 216 ntBASIC3.09□□□□□ -1.91
UBE3BQ7Z3V4 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.09□□□□□ -1.91
UBE3BQ7Z3V4 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.09□□□□□ -1.91
UBE3BQ7Z3V4 RNU6-397P-201ENST00000516226 104 ntBASIC3.09□□□□□ -1.91
UBE3BQ7Z3V4 RNU6-1198P-201ENST00000516904 67 ntBASIC3.09□□□□□ -1.91
UBE3BQ7Z3V4 Y_RNA.713-201ENST00000517013 96 ntBASIC3.09□□□□□ -1.91
UBE3BQ7Z3V4 AC096772.1-201ENST00000609146 564 ntBASIC3.09□□□□□ -1.91
UBE3BQ7Z3V4 AL590808.1-201ENST00000618696 141 ntBASIC3.09□□□□□ -1.91
UBE3BQ7Z3V4 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
UBE3BQ7Z3V4 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
UBE3BQ7Z3V4 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
UBE3BQ7Z3V4 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.08□□□□□ -1.92
UBE3BQ7Z3V4 OR56A5-201ENST00000340110 738 ntBASIC3.08□□□□□ -1.92
UBE3BQ7Z3V4 Y_RNA.64-201ENST00000362845 102 ntBASIC3.08□□□□□ -1.92
UBE3BQ7Z3V4 Y_RNA.188-201ENST00000363952 111 ntBASIC3.08□□□□□ -1.92
UBE3BQ7Z3V4 Y_RNA.319-201ENST00000365138 92 ntBASIC3.08□□□□□ -1.92
UBE3BQ7Z3V4 RNU6-806P-201ENST00000365147 105 ntBASIC3.08□□□□□ -1.92
UBE3BQ7Z3V4 RNU6-318P-201ENST00000384283 103 ntBASIC3.08□□□□□ -1.92
UBE3BQ7Z3V4 RNU6-1140P-201ENST00000410517 106 ntBASIC3.08□□□□□ -1.92
UBE3BQ7Z3V4 AC012306.1-201ENST00000423267 114 ntBASIC3.08□□□□□ -1.92
UBE3BQ7Z3V4 AL358075.3-201ENST00000426289 226 ntBASIC3.08□□□□□ -1.92
UBE3BQ7Z3V4 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.08□□□□□ -1.92
UBE3BQ7Z3V4 AC016700.2-201ENST00000446011 156 ntBASIC3.08□□□□□ -1.92
UBE3BQ7Z3V4 AP000705.1-201ENST00000454567 350 ntBASIC3.08□□□□□ -1.92
UBE3BQ7Z3V4 LINC01399-202ENST00000458450 244 ntBASIC3.08□□□□□ -1.92
UBE3BQ7Z3V4 RN7SL636P-201ENST00000497504 294 ntBASIC3.08□□□□□ -1.92
UBE3BQ7Z3V4 RNY3P15-201ENST00000516297 97 ntBASIC3.08□□□□□ -1.92
UBE3BQ7Z3V4 RNU6-567P-201ENST00000516746 107 ntBASIC3.08□□□□□ -1.92
UBE3BQ7Z3V4 AC022868.1-201ENST00000517767 391 ntBASIC3.08□□□□□ -1.92
UBE3BQ7Z3V4 AC105137.2-201ENST00000569073 466 ntBASIC3.08□□□□□ -1.92
UBE3BQ7Z3V4 SNORD53-201ENST00000579969 78 ntBASIC3.08□□□□□ -1.92
UBE3BQ7Z3V4 MIR3945-201ENST00000581853 98 ntBASIC3.08□□□□□ -1.92
UBE3BQ7Z3V4 MIR3136-201ENST00000583498 78 ntBASIC3.08□□□□□ -1.92
UBE3BQ7Z3V4 AC062037.2-201ENST00000610137 73 ntBASIC3.08□□□□□ -1.92
UBE3BQ7Z3V4 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.08□□□□□ -1.92
UBE3BQ7Z3V4 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
UBE3BQ7Z3V4 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 640 ms